| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is 126208956
Identifier: 126208956
GI number: 126208956
Start: 1707915
End: 1708187
Strand: Reverse
Name: 126208956
Synonym: APL_1492
Alternate gene names: NA
Gene position: 1708187-1707915 (Counterclockwise)
Preceding gene: 126208957
Following gene: 126208955
Centisome position: 75.1
GC content: 35.9
Gene sequence:
>273_bases ATGAGCAATTCAGTTATCACCGTTATCGGTAAAGACCGTGTAGGTATTGTGTACGACGTATCAAAAATCTTAGCGGAAAA TCAAATTAATATTGTGAATATCAGCCAACAATTAATGGATGACTTTTTTACGATGGTAATTTTGGTGGATACTGCCAAAT GTGCCAAATCATTCCCGGAATTAGCCGAGTTTTTCACGCAAGAAAGTAAAAAGCTGGCGTTAGATATTCGTATTCAAAAC GAAGAAATTTTCAAAGCGATGCACCGTATTTAA
Upstream 100 bases:
>100_bases TTAATTTGCGCAAACGTTTGCGCAATGTCTAGTCAAACAATCGAAACGGCGTTATACTCATCGCTCCCATCTAATAATAT GCAAACTCGAGGAAGCGACA
Downstream 100 bases:
>100_bases GGGAGTGGCGAAATGAGTATTCAATCCAGCGAAATTATTGAAACGATAAAAATGGTCGCCGACCAGAACTTTGACGTGCG CACCATTACCATCGGTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSNSVITVIGKDRVGIVYDVSKILAENQINIVNISQQLMDDFFTMVILVDTAKCAKSFPELAEFFTQESKKLALDIRIQN EEIFKAMHRI
Sequences:
>Translated_90_residues MSNSVITVIGKDRVGIVYDVSKILAENQINIVNISQQLMDDFFTMVILVDTAKCAKSFPELAEFFTQESKKLALDIRIQN EEIFKAMHRI >Mature_89_residues SNSVITVIGKDRVGIVYDVSKILAENQINIVNISQQLMDDFFTMVILVDTAKCAKSFPELAEFFTQESKKLALDIRIQNE EIFKAMHRI
Specific function: Unknown
COG id: COG3830
COG function: function code T; ACT domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR022986 [H]
Pfam domain/function: PF01842 ACT [H]
EC number: NA
Molecular weight: Translated: 10266; Mature: 10135
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSVITVIGKDRVGIVYDVSKILAENQINIVNISQQLMDDFFTMVILVDTAKCAKSFPE CCCCEEEEEECCCCCCEEHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHCCHH LAEFFTQESKKLALDIRIQNEEIFKAMHRI HHHHHHCCCCEEEEEEEECCHHHHHHHHCC >Mature Secondary Structure SNSVITVIGKDRVGIVYDVSKILAENQINIVNISQQLMDDFFTMVILVDTAKCAKSFPE CCCEEEEEECCCCCCEEHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHCCHH LAEFFTQESKKLALDIRIQNEEIFKAMHRI HHHHHHCCCCEEEEEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]