| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208955
Identifier: 126208955
GI number: 126208955
Start: 1706547
End: 1707902
Strand: Reverse
Name: 126208955
Synonym: APL_1491
Alternate gene names: NA
Gene position: 1707902-1706547 (Counterclockwise)
Preceding gene: 126208956
Following gene: 126208952
Centisome position: 75.09
GC content: 45.94
Gene sequence:
>1356_bases ATGAGTATTCAATCCAGCGAAATTATTGAAACGATAAAAATGGTCGCCGACCAGAACTTTGACGTGCGCACCATTACCAT CGGTATCGATTTACACGACTGTATCAGTGCCGATATTGATGAATTAAACAAAAATATTTATCAAAAAATTACCACCATCG GCAAAGACTTAGTCGAAACCGCCAAAATTCTTTCCGCCAAATACGGCATACCTATCGTTAATCAGCGTATTTCCGTCACG CCTATCGCACAAATTGCCGCAGCAACGAAAGCGGATTCTTATGTTTCTATCGCACAAACACTCGACCGTGCGGCAAAAGC AATCGGCGTATCTTTTATCGGTGGCTTTTCAGCGTTAGTCCAAAAAGGGATGTCTCCTTCGGATGAAGTGCTGATCCGCT CGATTCCGGAAGCAATGCAAACCACCGATATAGTGTGTAGCTCGATCAATATTGGCTCAACCCGTGCCGGTATTAATATG GATGCGGTAAAACTTGCCGGTGAAACGATTAAACGTACCGCTGACATTACTCCGGAAGGTTTCGGCTGTGCCAAAATTGT GGTGTTCTGTAATGCAGTGGAAGATAATCCGTTTATGGCGGGTGCATTCCACGGTTCGGGTGAAGCGGATGCGATTATTA ACGTGGGGGTTTCAGGCCCGGGCGTGGTGAAAGAAGCGTTAGAAAATTCAAATGCGACAACCTTAACCGAAGTGGCTGAA GTCGTGAAGAAAACCGCGTTTAAAATTACCCGTGTCGGTGAATTAATCGGTCAAGAAGCGTCAAAAATGCTGAATATTCC GTTCGGTATCTTAGACTTATCACTGGCACCAACACCGGCAATCGGTGATTCCGTTGCTCGTATTTTAGAAACGATGGGTT TAAGTGTATGTGGTACGCACGGTACTACTGCAGCCTTAGCATTATTAAACGATGCAGTGAAAAAAGGCGGTATGATGGCA TCTAGCTCAGTCGGCGGCTTAAGTGGTGCGTTTATTCCGGTTTCAGAAGACGAAGGTATGATCGCAGCCGCAGAGAGCGG TATTTTAACCCTAGATAAACTGGAAGCGATGACTGCAGTTTGTTCGGTCGGTTTAGATATGATAGCCGTACCGGGTAAAA CACCGGCACACACCATTTCCGGTATTATTGCCGATGAAGCGGCAATTGGTATGATCAACAGCAAAACCACAGCAGTTCGT ATTATTCCGGTAACTGGCAAAGACATTGGCGAAAGCGTGGAATTTGGTGGCTTACTCGGCTATGCGCCGATTATGCCGGT TAAAGAAGGTTCGTGCGAGGTGTTTGTAAATCGTGGCGGACGTATTCCGGCACCGGTTCAATCAATGAAAAACTAA
Upstream 100 bases:
>100_bases CGAGTTTTTCACGCAAGAAAGTAAAAAGCTGGCGTTAGATATTCGTATTCAAAACGAAGAAATTTTCAAAGCGATGCACC GTATTTAAGGGAGTGGCGAA
Downstream 100 bases:
>100_bases TCGCTATTTAGCTTTAAAACTTATAAAAAGCGGTCAATTTCAATAGGAATTTTGCAAAAATCCTGAGAAATTGACCGCTT GTTTTTTATATCTTCACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSIQSSEIIETIKMVADQNFDVRTITIGIDLHDCISADIDELNKNIYQKITTIGKDLVETAKILSAKYGIPIVNQRISVT PIAQIAAATKADSYVSIAQTLDRAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMQTTDIVCSSINIGSTRAGINM DAVKLAGETIKRTADITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAIINVGVSGPGVVKEALENSNATTLTEVAE VVKKTAFKITRVGELIGQEASKMLNIPFGILDLSLAPTPAIGDSVARILETMGLSVCGTHGTTAALALLNDAVKKGGMMA SSSVGGLSGAFIPVSEDEGMIAAAESGILTLDKLEAMTAVCSVGLDMIAVPGKTPAHTISGIIADEAAIGMINSKTTAVR IIPVTGKDIGESVEFGGLLGYAPIMPVKEGSCEVFVNRGGRIPAPVQSMKN
Sequences:
>Translated_451_residues MSIQSSEIIETIKMVADQNFDVRTITIGIDLHDCISADIDELNKNIYQKITTIGKDLVETAKILSAKYGIPIVNQRISVT PIAQIAAATKADSYVSIAQTLDRAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMQTTDIVCSSINIGSTRAGINM DAVKLAGETIKRTADITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAIINVGVSGPGVVKEALENSNATTLTEVAE VVKKTAFKITRVGELIGQEASKMLNIPFGILDLSLAPTPAIGDSVARILETMGLSVCGTHGTTAALALLNDAVKKGGMMA SSSVGGLSGAFIPVSEDEGMIAAAESGILTLDKLEAMTAVCSVGLDMIAVPGKTPAHTISGIIADEAAIGMINSKTTAVR IIPVTGKDIGESVEFGGLLGYAPIMPVKEGSCEVFVNRGGRIPAPVQSMKN >Mature_450_residues SIQSSEIIETIKMVADQNFDVRTITIGIDLHDCISADIDELNKNIYQKITTIGKDLVETAKILSAKYGIPIVNQRISVTP IAQIAAATKADSYVSIAQTLDRAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMQTTDIVCSSINIGSTRAGINMD AVKLAGETIKRTADITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAIINVGVSGPGVVKEALENSNATTLTEVAEV VKKTAFKITRVGELIGQEASKMLNIPFGILDLSLAPTPAIGDSVARILETMGLSVCGTHGTTAALALLNDAVKKGGMMAS SSVGGLSGAFIPVSEDEGMIAAAESGILTLDKLEAMTAVCSVGLDMIAVPGKTPAHTISGIIADEAAIGMINSKTTAVRI IPVTGKDIGESVEFGGLLGYAPIMPVKEGSCEVFVNRGGRIPAPVQSMKN
Specific function: Unknown
COG id: COG2848
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0210 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007841 [H]
Pfam domain/function: PF05167 DUF711 [H]
EC number: NA
Molecular weight: Translated: 46686; Mature: 46554
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQSSEIIETIKMVADQNFDVRTITIGIDLHDCISADIDELNKNIYQKITTIGKDLVET CCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKILSAKYGIPIVNQRISVTPIAQIAAATKADSYVSIAQTLDRAAKAIGVSFIGGFSALV HHHHHHHCCCCEECCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKGMSPSDEVLIRSIPEAMQTTDIVCSSINIGSTRAGINMDAVKLAGETIKRTADITPEG HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC FGCAKIVVFCNAVEDNPFMAGAFHGSGEADAIINVGVSGPGVVKEALENSNATTLTEVAE CCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHH VVKKTAFKITRVGELIGQEASKMLNIPFGILDLSLAPTPAIGDSVARILETMGLSVCGTH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEECCC GTTAALALLNDAVKKGGMMASSSVGGLSGAFIPVSEDEGMIAAAESGILTLDKLEAMTAV CHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCCEEEECCCCCEEHHHHHHHHHH CSVGLDMIAVPGKTPAHTISGIIADEAAIGMINSKTTAVRIIPVTGKDIGESVEFGGLLG HHCCCCEEECCCCCCHHHHHHHHHCHHHEEEECCCCEEEEEEEECCCCCCCCCCCCCEEC YAPIMPVKEGSCEVFVNRGGRIPAPVQSMKN CCCCCCCCCCCEEEEEECCCCCCCCHHHHCC >Mature Secondary Structure SIQSSEIIETIKMVADQNFDVRTITIGIDLHDCISADIDELNKNIYQKITTIGKDLVET CCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKILSAKYGIPIVNQRISVTPIAQIAAATKADSYVSIAQTLDRAAKAIGVSFIGGFSALV HHHHHHHCCCCEECCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKGMSPSDEVLIRSIPEAMQTTDIVCSSINIGSTRAGINMDAVKLAGETIKRTADITPEG HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC FGCAKIVVFCNAVEDNPFMAGAFHGSGEADAIINVGVSGPGVVKEALENSNATTLTEVAE CCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHH VVKKTAFKITRVGELIGQEASKMLNIPFGILDLSLAPTPAIGDSVARILETMGLSVCGTH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEECCC GTTAALALLNDAVKKGGMMASSSVGGLSGAFIPVSEDEGMIAAAESGILTLDKLEAMTAV CHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCCEEEECCCCCEEHHHHHHHHHH CSVGLDMIAVPGKTPAHTISGIIADEAAIGMINSKTTAVRIIPVTGKDIGESVEFGGLLG HHCCCCEEECCCCCCHHHHHHHHHCHHHEEEECCCCEEEEEEEECCCCCCCCCCCCCEEC YAPIMPVKEGSCEVFVNRGGRIPAPVQSMKN CCCCCCCCCCCEEEEEECCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA