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The map label for this gene is yfgE [C]

Identifier: 126208837

GI number: 126208837

Start: 1569626

End: 1570336

Strand: Reverse

Name: yfgE [C]

Synonym: APL_1373

Alternate gene names: 126208837

Gene position: 1570336-1569626 (Counterclockwise)

Preceding gene: 126208844

Following gene: 126208836

Centisome position: 69.04

GC content: 36.85

Gene sequence:

>711_bases
TTGCAATTACCATTACCCATTCATCAAGTTGATGATGAAACTTTCGATAATTTTTATGCGGAAAACAGTCTTGTACTGCT
AGATTCGTTACGTCAAAATTTTATCGATGTACAACAGCCGTTCTTTTATATTTGGGGCGGAAAAAGTAGTGGTAAAAGTC
ATCTCTTAAAAGCGGTAAGTAATCATTATTTACTGAATCAACAAACTTCCAGCTATATTCCTTTAGAAAAATCACAATAC
TTTTCGCCTATGGTTTTGGATAACGCCGAACAATTAGATGTGATTTGTTTGGATGATATTCAGATTGTCGCAGGTAATGA
AGAATGGGAACTGGCTATCTTTAATCTTTTTAATTTGATTCGTGAGCAGCAAAGTTTATTTGGTAATGGGCATAAAACGT
TGTTATTGATTAGTGCGGACTGTCCTCCTCATCAATTGCAGATCAATTTACCGGATCTTCGTTCTCGTTTGACTTGGGGT
GAGGTTTACCAGCTAAACGATTTAAGTGATGATCAAAAGCGTATCATTTTGCAACGAAATGCTTATCAAAAGGGAATGGA
ACTTTCCGATGAAGTTGCCAATTTCTTGCTAAAACGTTTGGATCGGGATTTACAAACATTATCAACGGAGTTGGACCGTT
TAGACCGTGCCTCTTTGCAAGCTCAACGCAAATTGACGGTTCCTTTTGTGAAAGAAATTCTCGGTTTGTAA

Upstream 100 bases:

>100_bases
AAAGTTAAAACAATATATTTTCTTTTTCTACTTCTCAAAATCATTCTTTTCCGTTATCCTTTTAAAGTTATTGAATTTTT
ATAGGACTGAAAATATTTCT

Downstream 100 bases:

>100_bases
AGCGGTTTGATTCCTGTCAAAATTTGCAAAAAATTTGTTAAATTTAACCGCTTATTACCTCTAAAGAGGTAATGATATGG
CTACGTTAAATCTCCCTCTT

Product: DNA replication initiation factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MQLPLPIHQVDDETFDNFYAENSLVLLDSLRQNFIDVQQPFFYIWGGKSSGKSHLLKAVSNHYLLNQQTSSYIPLEKSQY
FSPMVLDNAEQLDVICLDDIQIVAGNEEWELAIFNLFNLIREQQSLFGNGHKTLLLISADCPPHQLQINLPDLRSRLTWG
EVYQLNDLSDDQKRIILQRNAYQKGMELSDEVANFLLKRLDRDLQTLSTELDRLDRASLQAQRKLTVPFVKEILGL

Sequences:

>Translated_236_residues
MQLPLPIHQVDDETFDNFYAENSLVLLDSLRQNFIDVQQPFFYIWGGKSSGKSHLLKAVSNHYLLNQQTSSYIPLEKSQY
FSPMVLDNAEQLDVICLDDIQIVAGNEEWELAIFNLFNLIREQQSLFGNGHKTLLLISADCPPHQLQINLPDLRSRLTWG
EVYQLNDLSDDQKRIILQRNAYQKGMELSDEVANFLLKRLDRDLQTLSTELDRLDRASLQAQRKLTVPFVKEILGL
>Mature_236_residues
MQLPLPIHQVDDETFDNFYAENSLVLLDSLRQNFIDVQQPFFYIWGGKSSGKSHLLKAVSNHYLLNQQTSSYIPLEKSQY
FSPMVLDNAEQLDVICLDDIQIVAGNEEWELAIFNLFNLIREQQSLFGNGHKTLLLISADCPPHQLQINLPDLRSRLTWG
EVYQLNDLSDDQKRIILQRNAYQKGMELSDEVANFLLKRLDRDLQTLSTELDRLDRASLQAQRKLTVPFVKEILGL

Specific function: Unknown

COG id: COG0593

COG function: function code L; ATPase involved in DNA replication initiation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dnaA family. HdA subfamily [H]

Homologues:

Organism=Escherichia coli, GI226510964, Length=235, Percent_Identity=46.8085106382979, Blast_Score=213, Evalue=7e-57,
Organism=Escherichia coli, GI2367267, Length=236, Percent_Identity=27.5423728813559, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020591
- InterPro:   IPR017788
- InterPro:   IPR013317 [H]

Pfam domain/function: PF00308 Bac_DnaA [H]

EC number: NA

Molecular weight: Translated: 27264; Mature: 27264

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPLPIHQVDDETFDNFYAENSLVLLDSLRQNFIDVQQPFFYIWGGKSSGKSHLLKAVS
CCCCCCCHHCCCHHHHHHHCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
NHYLLNQQTSSYIPLEKSQYFSPMVLDNAEQLDVICLDDIQIVAGNEEWELAIFNLFNLI
HCEEECCCCCCCCCCCHHHCCCCCEECCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHH
REQQSLFGNGHKTLLLISADCPPHQLQINLPDLRSRLTWGEVYQLNDLSDDQKRIILQRN
HHHHHHHCCCCEEEEEEECCCCCCEEEEECHHHHHHCCCCCEEEECCCCCHHHHEEHHHH
AYQKGMELSDEVANFLLKRLDRDLQTLSTELDRLDRASLQAQRKLTVPFVKEILGL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MQLPLPIHQVDDETFDNFYAENSLVLLDSLRQNFIDVQQPFFYIWGGKSSGKSHLLKAVS
CCCCCCCHHCCCHHHHHHHCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
NHYLLNQQTSSYIPLEKSQYFSPMVLDNAEQLDVICLDDIQIVAGNEEWELAIFNLFNLI
HCEEECCCCCCCCCCCHHHCCCCCEECCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHH
REQQSLFGNGHKTLLLISADCPPHQLQINLPDLRSRLTWGEVYQLNDLSDDQKRIILQRN
HHHHHHHCCCCEEEEEEECCCCCCEEEEECHHHHHHCCCCCEEEECCCCCHHHHEEHHHH
AYQKGMELSDEVANFLLKRLDRDLQTLSTELDRLDRASLQAQRKLTVPFVKEILGL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]