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The map label for this gene is hxuC [H]

Identifier: 126208765

GI number: 126208765

Start: 1487313

End: 1489436

Strand: Reverse

Name: hxuC [H]

Synonym: APL_1299

Alternate gene names: 126208765

Gene position: 1489436-1487313 (Counterclockwise)

Preceding gene: 126208766

Following gene: 126208764

Centisome position: 65.48

GC content: 39.27

Gene sequence:

>2124_bases
ATGCGATTCTCTCCATCAAAACTCTCTATGGCAGTATTTCTTGCAACAACATCTTTGGCTTATGCCCAAGAAAATACAGT
AAATTTAGATGTTGTTTCTGTTGTTTCGGAAAATGCCGGTGCAAAAAGTAGAACGAATGTTGTAACTTTAAAAGATTTAA
ATAAAGGTACAAAAGAAGATTTACGTGGTGTTTTAAGTGCTGAACCTGCTATCAATTTCGGTGGTGGTACGGGAGGTACT
TCACAATGGACAACTATTCGTGGAATGGGGCAAGATCAAATTGATATTAAAGTGGATAATACTTACTCTGATGCTCAGAT
TTTCCACCATCAAAGCCGTTTTATGTTAGATCCGTCATTAATTAAACGTATTGACGTGCGTAAGGGCGCAGGTTCTGCAA
GTGCAGGTATTGGTGCAACTAGCGGATCGATCGAAGCGACAACTGTGGATGCAAAAGATCTATTAAGAGAAGGACAAGAT
TTTGGTTTTAAATTAAATGCCGGTGTAAGTAGCAATAAAGGTCATTCGCAAGGTGCGAGCGTTTATGGTAAATCCGGTGC
ATTTGATGCGTTATTAAGCGGTAATTGGGAAACAGCTGAAAATTACAAAGGCGGTAAAGGTTATTCCAATAAAGAGGGTA
GCGACACGGTTAAAAACAGTGCATTAGGTCAGCGTGGTTTATTAGCTAAATTCGGTGTAGATATTAACGAAGATCATCGT
GTGGTATTAAGCCATCGCCAAGAGCGTTATCACGGTGAGCGTGCATTACGTGAAGAATTTGATTTCTCTCAGGACTGGAC
AACAACAGCAAGTTTAACGTCTGAACAACGTGCTGCCGGATATCAATTAGGGGCTGCTGCTGGAGTGGATCGTAATGGTC
GTCCAACTCGTTACTTACTTGATAAAAACGGTGCTTTAGTTGCAAATGATGCAAATAACGATCCTCGTTACCGTATTACG
ACTCAAAATACCACTAACCTTGAATATATCGGTAAAAATTTAGGTCTTATTAATGAAGTAAAAGCAAACGCTTACTTATT
AGAAAACTCACGTGAAGAAACCGATACTAATTCAAAAACGAAAGTGGTAATCAAAGGGGCGAATATCAATTTTGATTCTG
AAATCGGTAGCGATCACTTTGTAAAATATGGTGTGAATTATCGCCACCAAGAAGGTAAACCAAATTCATTAGAAGCTTTT
GCTGAAAACCGTAGAACGAGAAGATTAGAAGCGACAGGTGTAACGAATAACCAAGAAAAAGAAGATATTGGTGCTTATGT
AGAAGGTATTTGGGGCTTTGGTCCGGTGACCATGACAACCGGTTTACGTTATGACCATTTTGACTTTAAAGCCAATGACG
GTAAAAAAGTCAGTGACGGTGCATTTAGTCCAAGCGTCGGTTTAATTTGGGAAGTCGTTCAAGGTTTAAGCTTAAATACA
AACTTAAACTATGCGACACGTAGCCCACGTTTCTACGAAGTAGCATTAAGCGGTAGTACCGCTCGTAGTGTTGCTGATGA
CTTAAAAGCGGAAAAAGCACGTAATACGGAGATTGGTTTTAACTATGATTTTAATGATCAAATTTCACTTAATGGTAGCT
ACTTCTGGCAAAAAGTGAAAGATGCTCATGCAGTATTAAATAATACTTTAGTTAATTCAGCCTTATTACGTAATAAAGGT
TATGAATTAGGTGCAGCTTATAAATATAGCGGCTTCACTTTCCGCTTAGGTGTGGCGGACAGTAAGCCTGAAACTTGGGT
TTTCAATGATGCAAGTTTAGATAGTACAGTATATGCGGTAGCAACCGGACGTACGTGGACTACAGGTCTTTCTTATAAGT
TTGAAAATCCAAGTTTAGAAATCGGTTGGAAAGGTCGTTTTGTTGAAGGTGAAACCGGTACGCCAAGCCGTGGTTCAAAT
GCGACAACAGCTCCGGTTAAACAGTCAGGCTATGGTGTAAATGATTTCTACGCAAGTTGGGATGCAAATAAAAACTTAAC
ACTTAACTTTGCGGTAAATAACGCATTTAATAAAAATTATAAGAGCCATAGCCAACGTGCAGGTGCTACTAGCCTACCGT
CTGCAGGTCGTGACTTCCGTGTAAATGTAAATTACACTTTCTAA

Upstream 100 bases:

>100_bases
CTTTATTCAAAAATGAGATTGACTCGTATTATAGATTTAAGTATATTTACAGAACTTTATTGCAAATACGATTAATTCTC
AAAATTAATAAGGCGGTCAA

Downstream 100 bases:

>100_bases
TTGCTAAAATAAGTGTATAAATAACCGCTTGTGAGGGCTTCTTGCAAGCGGTTATTTTTCATAAAAAATTTGCAATTTCA
GGCAGTAATCGGTAAGGTTA

Product: TonB dependent/ligand-gated channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 707; Mature: 707

Protein sequence:

>707_residues
MRFSPSKLSMAVFLATTSLAYAQENTVNLDVVSVVSENAGAKSRTNVVTLKDLNKGTKEDLRGVLSAEPAINFGGGTGGT
SQWTTIRGMGQDQIDIKVDNTYSDAQIFHHQSRFMLDPSLIKRIDVRKGAGSASAGIGATSGSIEATTVDAKDLLREGQD
FGFKLNAGVSSNKGHSQGASVYGKSGAFDALLSGNWETAENYKGGKGYSNKEGSDTVKNSALGQRGLLAKFGVDINEDHR
VVLSHRQERYHGERALREEFDFSQDWTTTASLTSEQRAAGYQLGAAAGVDRNGRPTRYLLDKNGALVANDANNDPRYRIT
TQNTTNLEYIGKNLGLINEVKANAYLLENSREETDTNSKTKVVIKGANINFDSEIGSDHFVKYGVNYRHQEGKPNSLEAF
AENRRTRRLEATGVTNNQEKEDIGAYVEGIWGFGPVTMTTGLRYDHFDFKANDGKKVSDGAFSPSVGLIWEVVQGLSLNT
NLNYATRSPRFYEVALSGSTARSVADDLKAEKARNTEIGFNYDFNDQISLNGSYFWQKVKDAHAVLNNTLVNSALLRNKG
YELGAAYKYSGFTFRLGVADSKPETWVFNDASLDSTVYAVATGRTWTTGLSYKFENPSLEIGWKGRFVEGETGTPSRGSN
ATTAPVKQSGYGVNDFYASWDANKNLTLNFAVNNAFNKNYKSHSQRAGATSLPSAGRDFRVNVNYTF

Sequences:

>Translated_707_residues
MRFSPSKLSMAVFLATTSLAYAQENTVNLDVVSVVSENAGAKSRTNVVTLKDLNKGTKEDLRGVLSAEPAINFGGGTGGT
SQWTTIRGMGQDQIDIKVDNTYSDAQIFHHQSRFMLDPSLIKRIDVRKGAGSASAGIGATSGSIEATTVDAKDLLREGQD
FGFKLNAGVSSNKGHSQGASVYGKSGAFDALLSGNWETAENYKGGKGYSNKEGSDTVKNSALGQRGLLAKFGVDINEDHR
VVLSHRQERYHGERALREEFDFSQDWTTTASLTSEQRAAGYQLGAAAGVDRNGRPTRYLLDKNGALVANDANNDPRYRIT
TQNTTNLEYIGKNLGLINEVKANAYLLENSREETDTNSKTKVVIKGANINFDSEIGSDHFVKYGVNYRHQEGKPNSLEAF
AENRRTRRLEATGVTNNQEKEDIGAYVEGIWGFGPVTMTTGLRYDHFDFKANDGKKVSDGAFSPSVGLIWEVVQGLSLNT
NLNYATRSPRFYEVALSGSTARSVADDLKAEKARNTEIGFNYDFNDQISLNGSYFWQKVKDAHAVLNNTLVNSALLRNKG
YELGAAYKYSGFTFRLGVADSKPETWVFNDASLDSTVYAVATGRTWTTGLSYKFENPSLEIGWKGRFVEGETGTPSRGSN
ATTAPVKQSGYGVNDFYASWDANKNLTLNFAVNNAFNKNYKSHSQRAGATSLPSAGRDFRVNVNYTF
>Mature_707_residues
MRFSPSKLSMAVFLATTSLAYAQENTVNLDVVSVVSENAGAKSRTNVVTLKDLNKGTKEDLRGVLSAEPAINFGGGTGGT
SQWTTIRGMGQDQIDIKVDNTYSDAQIFHHQSRFMLDPSLIKRIDVRKGAGSASAGIGATSGSIEATTVDAKDLLREGQD
FGFKLNAGVSSNKGHSQGASVYGKSGAFDALLSGNWETAENYKGGKGYSNKEGSDTVKNSALGQRGLLAKFGVDINEDHR
VVLSHRQERYHGERALREEFDFSQDWTTTASLTSEQRAAGYQLGAAAGVDRNGRPTRYLLDKNGALVANDANNDPRYRIT
TQNTTNLEYIGKNLGLINEVKANAYLLENSREETDTNSKTKVVIKGANINFDSEIGSDHFVKYGVNYRHQEGKPNSLEAF
AENRRTRRLEATGVTNNQEKEDIGAYVEGIWGFGPVTMTTGLRYDHFDFKANDGKKVSDGAFSPSVGLIWEVVQGLSLNT
NLNYATRSPRFYEVALSGSTARSVADDLKAEKARNTEIGFNYDFNDQISLNGSYFWQKVKDAHAVLNNTLVNSALLRNKG
YELGAAYKYSGFTFRLGVADSKPETWVFNDASLDSTVYAVATGRTWTTGLSYKFENPSLEIGWKGRFVEGETGTPSRGSN
ATTAPVKQSGYGVNDFYASWDANKNLTLNFAVNNAFNKNYKSHSQRAGATSLPSAGRDFRVNVNYTF

Specific function: Required for utilization of free heme at low concentrations [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR011276
- InterPro:   IPR010949
- InterPro:   IPR010917 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 77235; Mature: 77235

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSPSKLSMAVFLATTSLAYAQENTVNLDVVSVVSENAGAKSRTNVVTLKDLNKGTKED
CCCCCCHHEEEEEEEEHHHHECCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHH
LRGVLSAEPAINFGGGTGGTSQWTTIRGMGQDQIDIKVDNTYSDAQIFHHQSRFMLDPSL
HHHHHHCCCCEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCHHHHCCCCCEEECHHH
IKRIDVRKGAGSASAGIGATSGSIEATTVDAKDLLREGQDFGFKLNAGVSSNKGHSQGAS
HHHHHCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCEEEECCCCCCCCCCCCCC
VYGKSGAFDALLSGNWETAENYKGGKGYSNKEGSDTVKNSALGQRGLLAKFGVDINEDHR
EECCCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCCCCE
VVLSHRQERYHGERALREEFDFSQDWTTTASLTSEQRAAGYQLGAAAGVDRNGRPTRYLL
EEEHHHHHHHHHHHHHHHHCCCCCCCCEEHHHCCHHHHCCEECCHHCCCCCCCCCCEEEE
DKNGALVANDANNDPRYRITTQNTTNLEYIGKNLGLINEVKANAYLLENSREETDTNSKT
ECCCEEEEECCCCCCCEEEEECCCCCHHHHCCCCCCEEECCCCEEEECCCCCCCCCCCCE
KVVIKGANINFDSEIGSDHFVKYGVNYRHQEGKPNSLEAFAENRRTRRLEATGVTNNQEK
EEEEEECCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHHHCCHHEEEEECCCCCCCCH
EDIGAYVEGIWGFGPVTMTTGLRYDHFDFKANDGKKVSDGAFSPSVGLIWEVVQGLSLNT
HHHHHHHHHHCCCCCEEEECCCEEECCEEECCCCCCCCCCCCCCCHHHHHHHHCCCEECC
NLNYATRSPRFYEVALSGSTARSVADDLKAEKARNTEIGFNYDFNDQISLNGSYFWQKVK
CCCEEECCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCCEEEECHHHHHHHHH
DAHAVLNNTLVNSALLRNKGYELGAAYKYSGFTFRLGVADSKPETWVFNDASLDSTVYAV
HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEECCCCCCCEEEEECCCCCCEEEEE
ATGRTWTTGLSYKFENPSLEIGWKGRFVEGETGTPSRGSNATTAPVKQSGYGVNDFYASW
EECCEEECCEEEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCCCHHCCCCCCHHEECC
DANKNLTLNFAVNNAFNKNYKSHSQRAGATSLPSAGRDFRVNVNYTF
CCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MRFSPSKLSMAVFLATTSLAYAQENTVNLDVVSVVSENAGAKSRTNVVTLKDLNKGTKED
CCCCCCHHEEEEEEEEHHHHECCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHH
LRGVLSAEPAINFGGGTGGTSQWTTIRGMGQDQIDIKVDNTYSDAQIFHHQSRFMLDPSL
HHHHHHCCCCEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCHHHHCCCCCEEECHHH
IKRIDVRKGAGSASAGIGATSGSIEATTVDAKDLLREGQDFGFKLNAGVSSNKGHSQGAS
HHHHHCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCEEEECCCCCCCCCCCCCC
VYGKSGAFDALLSGNWETAENYKGGKGYSNKEGSDTVKNSALGQRGLLAKFGVDINEDHR
EECCCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCCCCE
VVLSHRQERYHGERALREEFDFSQDWTTTASLTSEQRAAGYQLGAAAGVDRNGRPTRYLL
EEEHHHHHHHHHHHHHHHHCCCCCCCCEEHHHCCHHHHCCEECCHHCCCCCCCCCCEEEE
DKNGALVANDANNDPRYRITTQNTTNLEYIGKNLGLINEVKANAYLLENSREETDTNSKT
ECCCEEEEECCCCCCCEEEEECCCCCHHHHCCCCCCEEECCCCEEEECCCCCCCCCCCCE
KVVIKGANINFDSEIGSDHFVKYGVNYRHQEGKPNSLEAFAENRRTRRLEATGVTNNQEK
EEEEEECCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHHHCCHHEEEEECCCCCCCCH
EDIGAYVEGIWGFGPVTMTTGLRYDHFDFKANDGKKVSDGAFSPSVGLIWEVVQGLSLNT
HHHHHHHHHHCCCCCEEEECCCEEECCEEECCCCCCCCCCCCCCCHHHHHHHHCCCEECC
NLNYATRSPRFYEVALSGSTARSVADDLKAEKARNTEIGFNYDFNDQISLNGSYFWQKVK
CCCEEECCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCCEEEECHHHHHHHHH
DAHAVLNNTLVNSALLRNKGYELGAAYKYSGFTFRLGVADSKPETWVFNDASLDSTVYAV
HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEECCCCCCCEEEEECCCCCCEEEEE
ATGRTWTTGLSYKFENPSLEIGWKGRFVEGETGTPSRGSNATTAPVKQSGYGVNDFYASW
EECCEEECCEEEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCCCHHCCCCCCHHEECC
DANKNLTLNFAVNNAFNKNYKSHSQRAGATSLPSAGRDFRVNVNYTF
CCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751272 [H]