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The map label for this gene is yrbC [C]

Identifier: 126208755

GI number: 126208755

Start: 1479067

End: 1479705

Strand: Reverse

Name: yrbC [C]

Synonym: APL_1289

Alternate gene names: 126208755

Gene position: 1479705-1479067 (Counterclockwise)

Preceding gene: 126208756

Following gene: 126208754

Centisome position: 65.06

GC content: 39.28

Gene sequence:

>639_bases
ATGTTAAAAAATATCAAAAAAGTAATCGTGACCGGTTTTGTTGTAGTTACAACATTATTCTCGGCTCAAGCGTTTGCGGA
AACAAGCCCTTATGTTTTAACACAACAGGCGGCAGATAAATTATTCGGTGATATTAAAGCGAATCAAACTAAAATTAAAT
CCAATCCGGAATATTTACGTACGATTGTACGCAACGATTTAATGCCTCACGTACATGTGAAATATGCCGGTCAATTAGTG
TTAGGTAAAAATTTATCATCGGCAACCGATGCACAACGCGAAGCGTTTTTTACCGCTTTCGGTCAATTTGTCGAGCAATC
TTATGCGCAAGTATTAACGCAATATACGGATCAACAAGTACAAGTTGAAAATGAGAAACCGACGGACGGAAAAACGATCG
TAAGTATTCGTGTAAACTTAATCCAATCAAACGGTGCACAACCGGTGAAATTAGATTTCAAATGGCGTAAAAACAGTAAA
TCCGGTGAATGGCAGACTTATGACATGGCTGCCGAAGGGGTAAGTATGGTTGCGACTAAACAAAACGAATGGAGCGGCGT
ATTACGCCAAAAAGGTATTGATGCGCTTACCGCTCAAGTGGCTAAATCGGCTGAACAACCTATTACATTAAGCAAATAA

Upstream 100 bases:

>100_bases
AAGAAGAACCTAAAGCACAATAATTACAATTACTTAATGTTATACGGTAAGTAAGATTTTATTTCGGGTGGGATGACCGC
CTTACATTTGGAGATTTTAA

Downstream 100 bases:

>100_bases
TATAGTTTTATGAAACCACAAAAAATATTACAATGGGGCGTTCAGCAAAATAATGAAAGCTTATTTGTAAAATTATCCGG
TGAATTAACTCGAGACACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MLKNIKKVIVTGFVVVTTLFSAQAFAETSPYVLTQQAADKLFGDIKANQTKIKSNPEYLRTIVRNDLMPHVHVKYAGQLV
LGKNLSSATDAQREAFFTAFGQFVEQSYAQVLTQYTDQQVQVENEKPTDGKTIVSIRVNLIQSNGAQPVKLDFKWRKNSK
SGEWQTYDMAAEGVSMVATKQNEWSGVLRQKGIDALTAQVAKSAEQPITLSK

Sequences:

>Translated_212_residues
MLKNIKKVIVTGFVVVTTLFSAQAFAETSPYVLTQQAADKLFGDIKANQTKIKSNPEYLRTIVRNDLMPHVHVKYAGQLV
LGKNLSSATDAQREAFFTAFGQFVEQSYAQVLTQYTDQQVQVENEKPTDGKTIVSIRVNLIQSNGAQPVKLDFKWRKNSK
SGEWQTYDMAAEGVSMVATKQNEWSGVLRQKGIDALTAQVAKSAEQPITLSK
>Mature_212_residues
MLKNIKKVIVTGFVVVTTLFSAQAFAETSPYVLTQQAADKLFGDIKANQTKIKSNPEYLRTIVRNDLMPHVHVKYAGQLV
LGKNLSSATDAQREAFFTAFGQFVEQSYAQVLTQYTDQQVQVENEKPTDGKTIVSIRVNLIQSNGAQPVKLDFKWRKNSK
SGEWQTYDMAAEGVSMVATKQNEWSGVLRQKGIDALTAQVAKSAEQPITLSK

Specific function: Unknown

COG id: COG2854

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaC/ttg2D family [H]

Homologues:

Organism=Escherichia coli, GI1789583, Length=208, Percent_Identity=51.9230769230769, Blast_Score=230, Evalue=7e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023094
- InterPro:   IPR008869 [H]

Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]

EC number: NA

Molecular weight: Translated: 23563; Mature: 23563

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNIKKVIVTGFVVVTTLFSAQAFAETSPYVLTQQAADKLFGDIKANQTKIKSNPEYLR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCCCHHHHH
TIVRNDLMPHVHVKYAGQLVLGKNLSSATDAQREAFFTAFGQFVEQSYAQVLTQYTDQQV
HHHHHCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
QVENEKPTDGKTIVSIRVNLIQSNGAQPVKLDFKWRKNSKSGEWQTYDMAAEGVSMVATK
EECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEHHHHHCCHHEEEEC
QNEWSGVLRQKGIDALTAQVAKSAEQPITLSK
CCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLKNIKKVIVTGFVVVTTLFSAQAFAETSPYVLTQQAADKLFGDIKANQTKIKSNPEYLR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCCCHHHHH
TIVRNDLMPHVHVKYAGQLVLGKNLSSATDAQREAFFTAFGQFVEQSYAQVLTQYTDQQV
HHHHHCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
QVENEKPTDGKTIVSIRVNLIQSNGAQPVKLDFKWRKNSKSGEWQTYDMAAEGVSMVATK
EECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEHHHHHCCHHEEEEC
QNEWSGVLRQKGIDALTAQVAKSAEQPITLSK
CCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]