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The map label for this gene is 126208750

Identifier: 126208750

GI number: 126208750

Start: 1475839

End: 1476177

Strand: Direct

Name: 126208750

Synonym: APL_1284

Alternate gene names: NA

Gene position: 1475839-1476177 (Clockwise)

Preceding gene: 126208747

Following gene: 126208751

Centisome position: 64.89

GC content: 48.67

Gene sequence:

>339_bases
ATGTTTCAAGACTGGAAAGCTCATACGGCGCACGTGAAAAAATCATTCGGCGCATTGGGTGCAAAGCATCCTAAAATGTT
TGAAGCTTATCAAGCTTTAGGTGCAGCGGCGGCAGCGGAAGCGCTTGATCACAAAACGCGTGAACTAATTGCGCTTGCCG
TAGCGGTAACCACTCGTTGCGACAGCTGTATTAGCGTACATGCGGAAGAAGCGGCAAAAGCCGGTGCAACGGAAAGTGAG
ATTGCGGGCGCATTAGCAACCGCTATTGCGTTAAATGCAGGTGCGGCTTATACCTATTCTTTAAGAGCTTTAGAAGCAGT
GGCGGTTCAAGATGAATAA

Upstream 100 bases:

>100_bases
AGGTTTGCAAAATTTCTTAAAAATTTCACCGCTTATTGTAATATTCTTTAAAATCTATCGTCCAAAACAGCGTATCCACA
TTCAATAAGAGGAAAATTTT

Downstream 100 bases:

>100_bases
ATTAACTTACCTTTTAGGCGCTTTAGTGTTAGCTACTCCCGTCCTAACGCAAGCGGCGGAAATGAAAGAGACGGAGCAAA
CAATGCAAAATGCACCGCTA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MFQDWKAHTAHVKKSFGALGAKHPKMFEAYQALGAAAAAEALDHKTRELIALAVAVTTRCDSCISVHAEEAAKAGATESE
IAGALATAIALNAGAAYTYSLRALEAVAVQDE

Sequences:

>Translated_112_residues
MFQDWKAHTAHVKKSFGALGAKHPKMFEAYQALGAAAAAEALDHKTRELIALAVAVTTRCDSCISVHAEEAAKAGATESE
IAGALATAIALNAGAAYTYSLRALEAVAVQDE
>Mature_112_residues
MFQDWKAHTAHVKKSFGALGAKHPKMFEAYQALGAAAAAEALDHKTRELIALAVAVTTRCDSCISVHAEEAAKAGATESE
IAGALATAIALNAGAAYTYSLRALEAVAVQDE

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 11628; Mature: 11628

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQDWKAHTAHVKKSFGALGAKHPKMFEAYQALGAAAAAEALDHKTRELIALAVAVTTRC
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSCISVHAEEAAKAGATESEIAGALATAIALNAGAAYTYSLRALEAVAVQDE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFQDWKAHTAHVKKSFGALGAKHPKMFEAYQALGAAAAAEALDHKTRELIALAVAVTTRC
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSCISVHAEEAAKAGATESEIAGALATAIALNAGAAYTYSLRALEAVAVQDE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]