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The map label for this gene is yjjK [C]

Identifier: 126208749

GI number: 126208749

Start: 1474004

End: 1475674

Strand: Reverse

Name: yjjK [C]

Synonym: APL_1283

Alternate gene names: 126208749

Gene position: 1475674-1474004 (Counterclockwise)

Preceding gene: 126208752

Following gene: 126208748

Centisome position: 64.88

GC content: 45.3

Gene sequence:

>1671_bases
ATGTCCCAACAATTTGTTTATACAATGCATCGTGTCGGCAAAGTCGTGCCGCCGAAGCGTCATATCCTTAAAGATATTTC
TTTAAGCTTTTTTCCGGGTGCAAAAATCGGTGTGCTTGGTTTAAACGGTGCGGGTAAATCAACTTTATTACGTATCATGG
CGGGCGTGGATAAAGAGTTCGAAGGTGAAGCTCGTCCGCAACCGGGGATTAAAATCGGTTATTTACCGCAAGAGCCCAAA
TTAGATCCGCAACAAACCGTGCGTGAAGCGATTGAAGAAGCGGTTTCGGAAGTAAAAAATGCGCTAACGCGTTTAGACGA
AGTTTATGCGTTATATGCCGATCCGGATGCGGATTTCGATAAATTAGCCGCAGAGCAAGCGAATTTAGAAGCGATTATTC
AAGCGCATGACGGCCACAATCTTGATAACCAATTAGAACGTGCGGCGGATGCGTTACGTTTACCGGAATGGGATGCGAAA
ATCGAACATTTATCGGGGGGTGAACGTCGTCGTGTGGCACTTTGCCGTTTATTACTCGAAAAACCGGATATGTTATTGTT
AGACGAACCGACCAACCACTTGGATGCGGAATCGGTAGCGTGGTTAGAACGCTTCTTACATGACTATGAGGGCACTGTGG
TAGCGATTACCCACGACCGTTACTTCTTAGATAACGTAGCAGGCTGGATCTTAGAGCTTGACCGTGGTGAAGGTATTCCT
TGGGAAGGTAACTATTCTTCTTGGTTAGAGCAAAAAGAGAAACGTTTAGAACAAGAAGCGGCGGCGGAATCCGCACGTCA
AAAATCGATTGCGAAAGAATTGGAATGGGTGCGTCAAAACCCGAAAGGTCGCCAAGCGAAAAGTAAAGCGCGTATGGCAC
GTTTTGACGAGCTTAACTCGGGCGAATATCAAAAACGTAACGAAACCAACGAACTCTTTATTCCGCCTGGTCCGCGTTTA
GGCGATAAAGTGATCGAAGTAAGTAACTTAACTAAGTCTTACGGCGAACGTACTTTAATTGATAATTTATCATTTAGTAT
TCCGAAAGGGGCGATTGTCGGGATTATCGGTGCTAACGGTGCGGGTAAATCGACTTTATTCCGTATGCTTTCAGGGCAAG
AACAACCGGATTCAGGCTCAATCGTAATGGGTGAAACGGTAGTGTTAGCCTCTGTAGATCAGTTCCGTGATTCGATGGAC
GATAAGAAAACCGTATGGGAAGAAGTGTCGAACGGTCAAGATATTCTGACTATCGGTAACTTTGAAATTCCAAGTCGTGC
GTATGTCGGTCGTTTTAACTTTAAAGGTGTGGATCAGCAAAAACGTGTAGGCGAGTTATCCGGTGGTGAGCGCGGTCGTT
TACACTTAGCGAAACTTCTGCAACGTGGCGGTAACGTATTGTTATTGGACGAACCGACCAATGACTTGGACGTTGAAACT
TTACGTGCGTTAGAAAATGCGATCTTAGAATTCCCGGGCTGTGCCATGGTGATCTCGCACGACCGTTGGTTCTTAGACCG
TATCGCAACCCATATTTTAGATTACGGCGATGAAGGTAAAGTGACCTTCTACGAAGGTAACTTCTCTGATTATGAAGAGT
GGAAGAAGAAAACTTTAGGTGATGCGGCAACGCAACCTCACCGTATCAAATATAAACGTATTGCGAAGTAA

Upstream 100 bases:

>100_bases
ATAAGCGGTGAAATTTTTAAGAAATTTTGCAAACCTATATTTCCGCCGGAAATTCAAGTAGAATAACTAGCGATTTTCAT
AAGAGAAATGAGGAATAAAA

Downstream 100 bases:

>100_bases
TACGTGAATAAGCGGTCGGATTTTAGTGAAAATTTGCAAATTTTCCTTGAAATTCGACCGCTTGCATCTTTTGATTAGGC
AATAAAATGAGTGAACAACC

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MSQQFVYTMHRVGKVVPPKRHILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPQPGIKIGYLPQEPK
LDPQQTVREAIEEAVSEVKNALTRLDEVYALYADPDADFDKLAAEQANLEAIIQAHDGHNLDNQLERAADALRLPEWDAK
IEHLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITHDRYFLDNVAGWILELDRGEGIP
WEGNYSSWLEQKEKRLEQEAAAESARQKSIAKELEWVRQNPKGRQAKSKARMARFDELNSGEYQKRNETNELFIPPGPRL
GDKVIEVSNLTKSYGERTLIDNLSFSIPKGAIVGIIGANGAGKSTLFRMLSGQEQPDSGSIVMGETVVLASVDQFRDSMD
DKKTVWEEVSNGQDILTIGNFEIPSRAYVGRFNFKGVDQQKRVGELSGGERGRLHLAKLLQRGGNVLLLDEPTNDLDVET
LRALENAILEFPGCAMVISHDRWFLDRIATHILDYGDEGKVTFYEGNFSDYEEWKKKTLGDAATQPHRIKYKRIAK

Sequences:

>Translated_556_residues
MSQQFVYTMHRVGKVVPPKRHILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPQPGIKIGYLPQEPK
LDPQQTVREAIEEAVSEVKNALTRLDEVYALYADPDADFDKLAAEQANLEAIIQAHDGHNLDNQLERAADALRLPEWDAK
IEHLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITHDRYFLDNVAGWILELDRGEGIP
WEGNYSSWLEQKEKRLEQEAAAESARQKSIAKELEWVRQNPKGRQAKSKARMARFDELNSGEYQKRNETNELFIPPGPRL
GDKVIEVSNLTKSYGERTLIDNLSFSIPKGAIVGIIGANGAGKSTLFRMLSGQEQPDSGSIVMGETVVLASVDQFRDSMD
DKKTVWEEVSNGQDILTIGNFEIPSRAYVGRFNFKGVDQQKRVGELSGGERGRLHLAKLLQRGGNVLLLDEPTNDLDVET
LRALENAILEFPGCAMVISHDRWFLDRIATHILDYGDEGKVTFYEGNFSDYEEWKKKTLGDAATQPHRIKYKRIAK
>Mature_555_residues
SQQFVYTMHRVGKVVPPKRHILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPQPGIKIGYLPQEPKL
DPQQTVREAIEEAVSEVKNALTRLDEVYALYADPDADFDKLAAEQANLEAIIQAHDGHNLDNQLERAADALRLPEWDAKI
EHLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITHDRYFLDNVAGWILELDRGEGIPW
EGNYSSWLEQKEKRLEQEAAAESARQKSIAKELEWVRQNPKGRQAKSKARMARFDELNSGEYQKRNETNELFIPPGPRLG
DKVIEVSNLTKSYGERTLIDNLSFSIPKGAIVGIIGANGAGKSTLFRMLSGQEQPDSGSIVMGETVVLASVDQFRDSMDD
KKTVWEEVSNGQDILTIGNFEIPSRAYVGRFNFKGVDQQKRVGELSGGERGRLHLAKLLQRGGNVLLLDEPTNDLDVETL
RALENAILEFPGCAMVISHDRWFLDRIATHILDYGDEGKVTFYEGNFSDYEEWKKKTLGDAATQPHRIKYKRIAK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=545, Percent_Identity=29.5412844036697, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI27881506, Length=545, Percent_Identity=29.5412844036697, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI148612853, Length=524, Percent_Identity=28.8167938931298, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI10947135, Length=549, Percent_Identity=28.2331511839709, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI69354671, Length=549, Percent_Identity=28.2331511839709, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI31657092, Length=202, Percent_Identity=30.6930693069307, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI27881501, Length=191, Percent_Identity=25.6544502617801, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI30795238, Length=191, Percent_Identity=25.6544502617801, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI9955968, Length=246, Percent_Identity=27.6422764227642, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI9955966, Length=246, Percent_Identity=27.6422764227642, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI45243524, Length=246, Percent_Identity=27.6422764227642, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI2367384, Length=553, Percent_Identity=86.9801084990958, Blast_Score=995, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=516, Percent_Identity=33.3333333333333, Blast_Score=263, Evalue=3e-71,
Organism=Escherichia coli, GI1787041, Length=518, Percent_Identity=31.2741312741313, Blast_Score=234, Evalue=9e-63,
Organism=Escherichia coli, GI1789751, Length=531, Percent_Identity=31.4500941619586, Blast_Score=233, Evalue=4e-62,
Organism=Escherichia coli, GI87081782, Length=544, Percent_Identity=25, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=31.0880829015544, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI48994943, Length=474, Percent_Identity=24.6835443037975, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI87081791, Length=196, Percent_Identity=36.734693877551, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1788506, Length=550, Percent_Identity=22, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1790739, Length=172, Percent_Identity=34.3023255813954, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788761, Length=231, Percent_Identity=29.8701298701299, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1787164, Length=184, Percent_Identity=28.804347826087, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786398, Length=179, Percent_Identity=29.608938547486, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=29.4930875576037, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786345, Length=178, Percent_Identity=29.2134831460674, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786975, Length=217, Percent_Identity=26.7281105990783, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788897, Length=202, Percent_Identity=29.2079207920792, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1788472, Length=213, Percent_Identity=28.169014084507, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1789891, Length=233, Percent_Identity=27.0386266094421, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788450, Length=212, Percent_Identity=27.8301886792453, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789593, Length=209, Percent_Identity=28.2296650717703, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789991, Length=200, Percent_Identity=28.5, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1788644, Length=232, Percent_Identity=28.448275862069, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17555318, Length=545, Percent_Identity=28.4403669724771, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17559834, Length=535, Percent_Identity=27.4766355140187, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17553372, Length=536, Percent_Identity=29.4776119402985, Blast_Score=169, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI17542146, Length=213, Percent_Identity=23.4741784037559, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=512, Percent_Identity=29.4921875, Blast_Score=186, Evalue=6e-48,
Organism=Saccharomyces cerevisiae, GI6321121, Length=540, Percent_Identity=26.6666666666667, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6324314, Length=379, Percent_Identity=26.3852242744063, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6325030, Length=376, Percent_Identity=27.6595744680851, Blast_Score=108, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6323278, Length=241, Percent_Identity=29.4605809128631, Blast_Score=106, Evalue=9e-24,
Organism=Saccharomyces cerevisiae, GI6320266, Length=375, Percent_Identity=23.4666666666667, Blast_Score=77, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6323959, Length=217, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24642252, Length=543, Percent_Identity=29.097605893186, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI18859989, Length=543, Percent_Identity=29.097605893186, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24666836, Length=526, Percent_Identity=29.467680608365, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24641342, Length=535, Percent_Identity=29.3457943925234, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI24666092, Length=221, Percent_Identity=28.9592760180996, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI281362751, Length=180, Percent_Identity=30, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24650853, Length=180, Percent_Identity=30, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24648314, Length=165, Percent_Identity=27.8787878787879, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24650855, Length=180, Percent_Identity=30, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62490; Mature: 62359

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQFVYTMHRVGKVVPPKRHILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEF
CCCCHHHHHHHCCCCCCCHHHHHHHCCCEECCCCEEEEEEECCCCHHHHHHHHHCCCCCC
EGEARPQPGIKIGYLPQEPKLDPQQTVREAIEEAVSEVKNALTRLDEVYALYADPDADFD
CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHH
KLAAEQANLEAIIQAHDGHNLDNQLERAADALRLPEWDAKIEHLSGGERRRVALCRLLLE
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHC
KPDMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITHDRYFLDNVAGWILELDRGEGIP
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHEEEEECCCCCC
WEGNYSSWLEQKEKRLEQEAAAESARQKSIAKELEWVRQNPKGRQAKSKARMARFDELNS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
GEYQKRNETNELFIPPGPRLGDKVIEVSNLTKSYGERTLIDNLSFSIPKGAIVGIIGANG
CCCHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEECCC
AGKSTLFRMLSGQEQPDSGSIVMGETVVLASVDQFRDSMDDKKTVWEEVSNGQDILTIGN
CCHHHHHHHHCCCCCCCCCCEEECCEEEEHHHHHHHHCCCHHHHHHHHHCCCCEEEEECC
FEIPSRAYVGRFNFKGVDQQKRVGELSGGERGRLHLAKLLQRGGNVLLLDEPTNDLDVET
CCCCCCCEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHH
LRALENAILEFPGCAMVISHDRWFLDRIATHILDYGDEGKVTFYEGNFSDYEEWKKKTLG
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCC
DAATQPHRIKYKRIAK
CCCCCCCCCCHHHHCC
>Mature Secondary Structure 
SQQFVYTMHRVGKVVPPKRHILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEF
CCCHHHHHHHCCCCCCCHHHHHHHCCCEECCCCEEEEEEECCCCHHHHHHHHHCCCCCC
EGEARPQPGIKIGYLPQEPKLDPQQTVREAIEEAVSEVKNALTRLDEVYALYADPDADFD
CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHH
KLAAEQANLEAIIQAHDGHNLDNQLERAADALRLPEWDAKIEHLSGGERRRVALCRLLLE
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHC
KPDMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITHDRYFLDNVAGWILELDRGEGIP
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHEEEEECCCCCC
WEGNYSSWLEQKEKRLEQEAAAESARQKSIAKELEWVRQNPKGRQAKSKARMARFDELNS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
GEYQKRNETNELFIPPGPRLGDKVIEVSNLTKSYGERTLIDNLSFSIPKGAIVGIIGANG
CCCHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEECCC
AGKSTLFRMLSGQEQPDSGSIVMGETVVLASVDQFRDSMDDKKTVWEEVSNGQDILTIGN
CCHHHHHHHHCCCCCCCCCCEEECCEEEEHHHHHHHHCCCHHHHHHHHHCCCCEEEEECC
FEIPSRAYVGRFNFKGVDQQKRVGELSGGERGRLHLAKLLQRGGNVLLLDEPTNDLDVET
CCCCCCCEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHH
LRALENAILEFPGCAMVISHDRWFLDRIATHILDYGDEGKVTFYEGNFSDYEEWKKKTLG
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCC
DAATQPHRIKYKRIAK
CCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]