Click here to switch to the map view.

The map label for this gene is sprT [H]

Identifier: 126208736

GI number: 126208736

Start: 1459562

End: 1460053

Strand: Direct

Name: sprT [H]

Synonym: APL_1270

Alternate gene names: 126208736

Gene position: 1459562-1460053 (Clockwise)

Preceding gene: 126208735

Following gene: 126208737

Centisome position: 64.17

GC content: 46.14

Gene sequence:

>492_bases
ATGCGTCGGCTGAAAATGCAGGTTCAACGTCAGCTTAAACGTAATTTGGAGCAAGCCGACCGTTATTTCAATAAAACTTT
TACACCGCCGACGGTCAGTTATGCCGTACGCGGCGTAAAAGCCGGTGTCGCTTATCTGCAACGTAATGAAATTCGCTTTA
ATCCCGTTTTATTGGCGGAAAACGGGCAATCTTTTATTCAACAAGTGGTACCGCACGAACTTGCTCACGCTTTGGTTTAT
CAACAGTTCGGGCGAGTTCAACCGCACGGCAAAGAATGGAAAATGATGATGGAGCAAGTTTTCGGCGTACCGGCGGAAAC
CTATCATTGTTTCGATACGCAAAATGTGGTCGGTAAACAATTCGCCTATCAATGCGGCTGCCAAACGCATCTGCTTTCCG
TTCGTCGTCATAACGCTATCGTGCGAGACAGTCGCCGTTATCTCTGTAAACGCTGTAAACAAATCCTCACTTCCAAAGAC
AATTTAGCATAA

Upstream 100 bases:

>100_bases
AGATGCAAGCAAAACCGAACTCTATGTTTGCTACGATAAAAAATGGCAACCGATGGACTGTCCGAAATAAATGACGGAAT
TAACAGAAAACAGCGCGCTA

Downstream 100 bases:

>100_bases
GAGCCAAAATAACCTTAAAAGATACTGGACTTTATTGTTCAAGCGCCTAAAATTAACCCAAATTTTTTGACTTTTATCAA
TTTATTATCTTTTGGAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRRLKMQVQRQLKRNLEQADRYFNKTFTPPTVSYAVRGVKAGVAYLQRNEIRFNPVLLAENGQSFIQQVVPHELAHALVY
QQFGRVQPHGKEWKMMMEQVFGVPAETYHCFDTQNVVGKQFAYQCGCQTHLLSVRRHNAIVRDSRRYLCKRCKQILTSKD
NLA

Sequences:

>Translated_163_residues
MRRLKMQVQRQLKRNLEQADRYFNKTFTPPTVSYAVRGVKAGVAYLQRNEIRFNPVLLAENGQSFIQQVVPHELAHALVY
QQFGRVQPHGKEWKMMMEQVFGVPAETYHCFDTQNVVGKQFAYQCGCQTHLLSVRRHNAIVRDSRRYLCKRCKQILTSKD
NLA
>Mature_163_residues
MRRLKMQVQRQLKRNLEQADRYFNKTFTPPTVSYAVRGVKAGVAYLQRNEIRFNPVLLAENGQSFIQQVVPHELAHALVY
QQFGRVQPHGKEWKMMMEQVFGVPAETYHCFDTQNVVGKQFAYQCGCQTHLLSVRRHNAIVRDSRRYLCKRCKQILTSKD
NLA

Specific function: Involved In Bola Gene Expression At The Stationary Phase. [C]

COG id: COG3091

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sprT family [H]

Homologues:

Organism=Escherichia coli, GI1789313, Length=156, Percent_Identity=50.6410256410256, Blast_Score=169, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006640 [H]

Pfam domain/function: PF10263 SprT-like [H]

EC number: NA

Molecular weight: Translated: 19072; Mature: 19072

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLKMQVQRQLKRNLEQADRYFNKTFTPPTVSYAVRGVKAGVAYLQRNEIRFNPVLLAE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
NGQSFIQQVVPHELAHALVYQQFGRVQPHGKEWKMMMEQVFGVPAETYHCFDTQNVVGKQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHEECCCCHHHHHHH
FAYQCGCQTHLLSVRRHNAIVRDSRRYLCKRCKQILTSKDNLA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRRLKMQVQRQLKRNLEQADRYFNKTFTPPTVSYAVRGVKAGVAYLQRNEIRFNPVLLAE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
NGQSFIQQVVPHELAHALVYQQFGRVQPHGKEWKMMMEQVFGVPAETYHCFDTQNVVGKQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHEECCCCHHHHHHH
FAYQCGCQTHLLSVRRHNAIVRDSRRYLCKRCKQILTSKDNLA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA