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The map label for this gene is ydjA [C]

Identifier: 126208733

GI number: 126208733

Start: 1456082

End: 1456657

Strand: Reverse

Name: ydjA [C]

Synonym: APL_1267

Alternate gene names: 126208733

Gene position: 1456657-1456082 (Counterclockwise)

Preceding gene: 126208738

Following gene: 126208732

Centisome position: 64.04

GC content: 44.97

Gene sequence:

>576_bases
ATGTTACTGACTATGGATATTTTAGATTTATTACAACACCGTCGTTCAAATAAAAAATTCGGTGAAATCGCCCCTTCTGC
GGAGCAAGTTGAAAATATGATTAAAGCGGCGTTACGTGCGCCGGATCACGGCAAGATGAAGCCTTATCATTTTGTGGTGA
TCGAAAAAAGCGGAATGGCGAAATTACATGAGTGTTTAGCTGCCGCAGCTATTGAGTTTAATATGGACGAAAAAAATGCG
GCTAAGGCGGAAAAACTTTCCGGCCAAGCGCCGATGGTGATCGGCATTGTGGCAAAAATTAATCACGAATCACCGAAAGT
ACCGGCATGGGAACAGATTGTTAGTGCAGGCTGTGCAACTTATGCGATGCAATTAGCCGCAAATGCGCAAGGCTTTGAAA
CGGTTTGGATCAGCAAAAAATGGGTGGAAGGCTCACTATTGCGTGAAATGTTCGGTTGCCGTGCCGGTGATAAAGTAATC
GGTTTATTGTTAGTCGGATCTCCGAAAGAAGACGACGGTATTTCGTTGGCACGAGAAGCGGAAGAAACGGAAGGCTTTGT
GAGCGTGATTCGCTAA

Upstream 100 bases:

>100_bases
AACGTAAGAAATTTGCGCAATAAAATACCATAAAAAAGACGTGGAATTAACAAAATATGTTATTCTTATGCTAATTTTTA
CACGAAAATTTTACACGAAA

Downstream 100 bases:

>100_bases
CGATTGCAGGGCGTATTAGAGGAAAGTATGAAGACGATTCTAATTACCGGTTGTTCTTCCGGTATCGGTTATGCGACCGC
CAAATTATTGAAAGAAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MLLTMDILDLLQHRRSNKKFGEIAPSAEQVENMIKAALRAPDHGKMKPYHFVVIEKSGMAKLHECLAAAAIEFNMDEKNA
AKAEKLSGQAPMVIGIVAKINHESPKVPAWEQIVSAGCATYAMQLAANAQGFETVWISKKWVEGSLLREMFGCRAGDKVI
GLLLVGSPKEDDGISLAREAEETEGFVSVIR

Sequences:

>Translated_191_residues
MLLTMDILDLLQHRRSNKKFGEIAPSAEQVENMIKAALRAPDHGKMKPYHFVVIEKSGMAKLHECLAAAAIEFNMDEKNA
AKAEKLSGQAPMVIGIVAKINHESPKVPAWEQIVSAGCATYAMQLAANAQGFETVWISKKWVEGSLLREMFGCRAGDKVI
GLLLVGSPKEDDGISLAREAEETEGFVSVIR
>Mature_191_residues
MLLTMDILDLLQHRRSNKKFGEIAPSAEQVENMIKAALRAPDHGKMKPYHFVVIEKSGMAKLHECLAAAAIEFNMDEKNA
AKAEKLSGQAPMVIGIVAKINHESPKVPAWEQIVSAGCATYAMQLAANAQGFETVWISKKWVEGSLLREMFGCRAGDKVI
GLLLVGSPKEDDGISLAREAEETEGFVSVIR

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=165, Percent_Identity=46.6666666666667, Blast_Score=157, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20878; Mature: 20878

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTMDILDLLQHRRSNKKFGEIAPSAEQVENMIKAALRAPDHGKMKPYHFVVIEKSGMA
CEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHH
KLHECLAAAAIEFNMDEKNAAKAEKLSGQAPMVIGIVAKINHESPKVPAWEQIVSAGCAT
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHH
YAMQLAANAQGFETVWISKKWVEGSLLREMFGCRAGDKVIGLLLVGSPKEDDGISLAREA
HHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHH
EETEGFVSVIR
HHHHHHHHHCC
>Mature Secondary Structure
MLLTMDILDLLQHRRSNKKFGEIAPSAEQVENMIKAALRAPDHGKMKPYHFVVIEKSGMA
CEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHH
KLHECLAAAAIEFNMDEKNAAKAEKLSGQAPMVIGIVAKINHESPKVPAWEQIVSAGCAT
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHH
YAMQLAANAQGFETVWISKKWVEGSLLREMFGCRAGDKVIGLLLVGSPKEDDGISLAREA
HHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHH
EETEGFVSVIR
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]