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The map label for this gene is yddH [H]

Identifier: 126208682

GI number: 126208682

Start: 1396650

End: 1397213

Strand: Reverse

Name: yddH [H]

Synonym: APL_1214

Alternate gene names: 126208682

Gene position: 1397213-1396650 (Counterclockwise)

Preceding gene: 126208683

Following gene: 126208681

Centisome position: 61.43

GC content: 40.6

Gene sequence:

>564_bases
ATGGCGATTGTTTCTGTTCCGGTTGAAAAATCATATCGTTTACTTAATATCGGACCGACAACTTTGGTGTCGGCAAAAGC
GGATAATATTGAAAACGTTATGGCGGTAGCTTGGTCTTGTGCCTTGGATTACGGTCCGCTTTCTAAGGTAACGACCGTGT
TAGATAAGCAGGCATTTACTCGTGGATTAGTCGAGAAAAGCGGTTTATTTGCAATTCAAATTCCGGTGGCAAATCAGGCG
GAATTAGTATTGAAACTCGGTTCGACTTCACGCCGTACTGATCCGCATAAATTGGATAATGTAGAAATCTTTTATCAAGA
CGGTTTTGATATTCCGTTAGTAAAAGGTTGCGCCGGTTGGATTTTATGCGAATTGATCCGTAATCCGGAGAACCAACAAG
ATCACGATCTTTTTATCGGAAAAGTATTAGCGGCTTATGCTGATGATCGCGTGTTTAAAGATAATCATTGGATTTTTGAT
CAAGCGACAAATGACTTACGCACGTTACATTATGTTGCCGGCGGACAGTTTTATCTGATTGGCGAAAGTTTAGATGTTAA
GTAA

Upstream 100 bases:

>100_bases
AAGATATTCATTAATCGCAAGCGGTCGGATTTGTAGAAAATTTTGTAAATCTGACCGCTTGTTTTATTCACTTAGATTTA
AGCTTATTCACGAGGAAAAA

Downstream 100 bases:

>100_bases
TATTTATATTATCCGTGCGGCAGTGGTAAAAAATACAAAAAATGCTGTATGAAGCAATAATCTGCCGGATTCTGTTTATT
TTATACCTTGTATATCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MAIVSVPVEKSYRLLNIGPTTLVSAKADNIENVMAVAWSCALDYGPLSKVTTVLDKQAFTRGLVEKSGLFAIQIPVANQA
ELVLKLGSTSRRTDPHKLDNVEIFYQDGFDIPLVKGCAGWILCELIRNPENQQDHDLFIGKVLAAYADDRVFKDNHWIFD
QATNDLRTLHYVAGGQFYLIGESLDVK

Sequences:

>Translated_187_residues
MAIVSVPVEKSYRLLNIGPTTLVSAKADNIENVMAVAWSCALDYGPLSKVTTVLDKQAFTRGLVEKSGLFAIQIPVANQA
ELVLKLGSTSRRTDPHKLDNVEIFYQDGFDIPLVKGCAGWILCELIRNPENQQDHDLFIGKVLAAYADDRVFKDNHWIFD
QATNDLRTLHYVAGGQFYLIGESLDVK
>Mature_186_residues
AIVSVPVEKSYRLLNIGPTTLVSAKADNIENVMAVAWSCALDYGPLSKVTTVLDKQAFTRGLVEKSGLFAIQIPVANQAE
LVLKLGSTSRRTDPHKLDNVEIFYQDGFDIPLVKGCAGWILCELIRNPENQQDHDLFIGKVLAAYADDRVFKDNHWIFDQ
ATNDLRTLHYVAGGQFYLIGESLDVK

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=185, Percent_Identity=34.0540540540541, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 20783; Mature: 20652

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVSVPVEKSYRLLNIGPTTLVSAKADNIENVMAVAWSCALDYGPLSKVTTVLDKQAFT
CEEEECCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RGLVEKSGLFAIQIPVANQAELVLKLGSTSRRTDPHKLDNVEIFYQDGFDIPLVKGCAGW
HHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
ILCELIRNPENQQDHDLFIGKVLAAYADDRVFKDNHWIFDQATNDLRTLHYVAGGQFYLI
HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCCEEECCCCCCCEEEEEECCCEEEEE
GESLDVK
CCCCCCC
>Mature Secondary Structure 
AIVSVPVEKSYRLLNIGPTTLVSAKADNIENVMAVAWSCALDYGPLSKVTTVLDKQAFT
EEEECCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RGLVEKSGLFAIQIPVANQAELVLKLGSTSRRTDPHKLDNVEIFYQDGFDIPLVKGCAGW
HHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
ILCELIRNPENQQDHDLFIGKVLAAYADDRVFKDNHWIFDQATNDLRTLHYVAGGQFYLI
HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCCEEECCCCCCCEEEEEECCCEEEEE
GESLDVK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]