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The map label for this gene is yniC [H]

Identifier: 126208681

GI number: 126208681

Start: 1395762

End: 1396412

Strand: Reverse

Name: yniC [H]

Synonym: APL_1213

Alternate gene names: 126208681

Gene position: 1396412-1395762 (Counterclockwise)

Preceding gene: 126208682

Following gene: 126208680

Centisome position: 61.39

GC content: 42.86

Gene sequence:

>651_bases
ATGAAAAAGGCATTTATTTTTGATATGGACGGGGTATTAATTGATTCCGAGCCGTTATGGCAACAAACGGAATTGGAGCT
TTTACACGGTTACGGTATTCCGATTACCGAACAGGAATTGGCTCGAACACGAGGCATGCCGTCCGTACCGGTGTTGCGTT
ATGCAAGCGAGCTGTATCAAAAGCCGCTAGATATTGAAAAAGTGGCTCAAGAGCTGTTAGATGCGGCAATTAGTAATATT
TTAAAGGCGAAACCGCTCATCAACGGTGTAACGGAAACGTTAGAATTACTTGCACGACATGATATAAAAATTGCGATTGC
CTCCGCTTCGCCCCGTTATATGTTGGATAATATCGTGAAAAGCTGCGGTATTGCCGATTATTTTAGCTATATCGCATCCG
GTGCGGAACTGCCGTATAGCAAACCGCATCCGGCGGTCTATTTACAGGCGGCGAAAGGTTTAGGTATCGAGTCTGCAGAA
TGTGTCGGGATTGAAGATTCTAAACCGGGTATGATTTCGGTGAAAGCCGCTTCGATGAGCTGTATTGTGATCCCTAATGA
ATTAGATTTTCACGAAAATTATTGGGCGTTAGCCGATTTTAAATTAGCGAAAATGAATGAAATCAATCAGCAATTTTTAG
CGCAACTTTAA

Upstream 100 bases:

>100_bases
TTTTTGATCGTAGCCAAGAGATACGAAATAATTGATATAACCTTAAGAGTCGGATCTCGTACAATATTTCATTTGCGATA
TTTACAGTGAGGGGAAAGAG

Downstream 100 bases:

>100_bases
TTTACATTTTGTCGCAAGCGGTCGTAAATCTGGCAAAATTTACGACCGCTTGCGCATTTATTCGGTTTGAAAAACAGAGA
GATTAAAAAGGAATAATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKKAFIFDMDGVLIDSEPLWQQTELELLHGYGIPITEQELARTRGMPSVPVLRYASELYQKPLDIEKVAQELLDAAISNI
LKAKPLINGVTETLELLARHDIKIAIASASPRYMLDNIVKSCGIADYFSYIASGAELPYSKPHPAVYLQAAKGLGIESAE
CVGIEDSKPGMISVKAASMSCIVIPNELDFHENYWALADFKLAKMNEINQQFLAQL

Sequences:

>Translated_216_residues
MKKAFIFDMDGVLIDSEPLWQQTELELLHGYGIPITEQELARTRGMPSVPVLRYASELYQKPLDIEKVAQELLDAAISNI
LKAKPLINGVTETLELLARHDIKIAIASASPRYMLDNIVKSCGIADYFSYIASGAELPYSKPHPAVYLQAAKGLGIESAE
CVGIEDSKPGMISVKAASMSCIVIPNELDFHENYWALADFKLAKMNEINQQFLAQL
>Mature_216_residues
MKKAFIFDMDGVLIDSEPLWQQTELELLHGYGIPITEQELARTRGMPSVPVLRYASELYQKPLDIEKVAQELLDAAISNI
LKAKPLINGVTETLELLARHDIKIAIASASPRYMLDNIVKSCGIADYFSYIASGAELPYSKPHPAVYLQAAKGLGIESAE
CVGIEDSKPGMISVKAASMSCIVIPNELDFHENYWALADFKLAKMNEINQQFLAQL

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates 2-deoxyglucose 6-phosphate and mannose 6- phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1788021, Length=213, Percent_Identity=39.906103286385, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI1789046, Length=183, Percent_Identity=26.775956284153, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787576, Length=194, Percent_Identity=28.3505154639175, Blast_Score=70, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17137324, Length=211, Percent_Identity=26.0663507109005, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI20129151, Length=191, Percent_Identity=29.3193717277487, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 23901; Mature: 23901

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAFIFDMDGVLIDSEPLWQQTELELLHGYGIPITEQELARTRGMPSVPVLRYASELYQ
CCCEEEEECCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH
KPLDIEKVAQELLDAAISNILKAKPLINGVTETLELLARHDIKIAIASASPRYMLDNIVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHH
SCGIADYFSYIASGAELPYSKPHPAVYLQAAKGLGIESAECVGIEDSKPGMISVKAASMS
HCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEEECCEE
CIVIPNELDFHENYWALADFKLAKMNEINQQFLAQL
EEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKAFIFDMDGVLIDSEPLWQQTELELLHGYGIPITEQELARTRGMPSVPVLRYASELYQ
CCCEEEEECCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH
KPLDIEKVAQELLDAAISNILKAKPLINGVTETLELLARHDIKIAIASASPRYMLDNIVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHH
SCGIADYFSYIASGAELPYSKPHPAVYLQAAKGLGIESAECVGIEDSKPGMISVKAASMS
HCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEEECCEE
CIVIPNELDFHENYWALADFKLAKMNEINQQFLAQL
EEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]