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The map label for this gene is ychE [C]

Identifier: 126208667

GI number: 126208667

Start: 1381862

End: 1382479

Strand: Direct

Name: ychE [C]

Synonym: APL_1199

Alternate gene names: 126208667

Gene position: 1381862-1382479 (Clockwise)

Preceding gene: 126208666

Following gene: 126208671

Centisome position: 60.76

GC content: 41.59

Gene sequence:

>618_bases
ATGTTTGATTCATTAATTGTACAGTTTGTCGTGTTATGGGCGGTAATCGATCCAATCGGTTCGATTCCGGTCTATTTAGC
CAAAACAAACCAGCTTTCCACAGCAGAACGTCATAAAGTCGCTTTAAAAGCGGTCGGAATTGCGACGATTATCTTGCTAT
TCTTCTTGGTTGCCGTGCAATCTCTATTCGAAATGATGCAAATTCCGCTTTCCGCTTTCCAAATTGCCGGCGGTTTAGTC
TTATTAATCTTTGCTTTAACGATGATTTTCGGTGAAGGTAAACCGGAAAACGAAATCAAAATGCAAACCAGCTTAAGTGA
ATTGGCGGTTTATCCGCTTGCCGTTCCGTCTATCGCCTCTCCCGGTGCAATGATGGCGATCGTATTATTAACCGATAACC
ATCGCTTTAGTTTAACGGATCAATTCATTACTACGCTCATTATGTTAGCGGTATTGCTGATTACTTATTTCTTACTTTTA
GCCGCAAGTAAAATTCAAAATGTTATCGGCAGTGTCGGAGCTTCGGTTATCAGCCGAGTGATGGGATTAATTCTCGCCGC
CGTTGCAGTAAATAACTTGTTGGTTGGGATTCAGCAATTCTTCGGTTTAGCAAGTTAA

Upstream 100 bases:

>100_bases
ATTTATTTCCCAACTCGAAAACCCTGCCTTTCCAGCCTTGACGAAATCGAAAATTCTGTTACTTTACCAAATAACTAAGT
GATTTATTTGGAGTTTTACT

Downstream 100 bases:

>100_bases
TTTGCTAGTAATATAAACGGAAGCGGTAGTAAATTTTTAGGTAATTTACCACCGCTTGTTTTTAAATAGGTATATAAAAT
GCAAAAAGGCAGACTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MFDSLIVQFVVLWAVIDPIGSIPVYLAKTNQLSTAERHKVALKAVGIATIILLFFLVAVQSLFEMMQIPLSAFQIAGGLV
LLIFALTMIFGEGKPENEIKMQTSLSELAVYPLAVPSIASPGAMMAIVLLTDNHRFSLTDQFITTLIMLAVLLITYFLLL
AASKIQNVIGSVGASVISRVMGLILAAVAVNNLLVGIQQFFGLAS

Sequences:

>Translated_205_residues
MFDSLIVQFVVLWAVIDPIGSIPVYLAKTNQLSTAERHKVALKAVGIATIILLFFLVAVQSLFEMMQIPLSAFQIAGGLV
LLIFALTMIFGEGKPENEIKMQTSLSELAVYPLAVPSIASPGAMMAIVLLTDNHRFSLTDQFITTLIMLAVLLITYFLLL
AASKIQNVIGSVGASVISRVMGLILAAVAVNNLLVGIQQFFGLAS
>Mature_205_residues
MFDSLIVQFVVLWAVIDPIGSIPVYLAKTNQLSTAERHKVALKAVGIATIILLFFLVAVQSLFEMMQIPLSAFQIAGGLV
LLIFALTMIFGEGKPENEIKMQTSLSELAVYPLAVPSIASPGAMMAIVLLTDNHRFSLTDQFITTLIMLAVLLITYFLLL
AASKIQNVIGSVGASVISRVMGLILAAVAVNNLLVGIQQFFGLAS

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=198, Percent_Identity=32.8282828282828, Blast_Score=94, Evalue=4e-21,
Organism=Escherichia coli, GI1789842, Length=204, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787809, Length=196, Percent_Identity=27.5510204081633, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22010; Mature: 22010

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDSLIVQFVVLWAVIDPIGSIPVYLAKTNQLSTAERHKVALKAVGIATIILLFFLVAVQ
CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFEMMQIPLSAFQIAGGLVLLIFALTMIFGEGKPENEIKMQTSLSELAVYPLAVPSIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PGAMMAIVLLTDNHRFSLTDQFITTLIMLAVLLITYFLLLAASKIQNVIGSVGASVISRV
CCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGLILAAVAVNNLLVGIQQFFGLAS
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFDSLIVQFVVLWAVIDPIGSIPVYLAKTNQLSTAERHKVALKAVGIATIILLFFLVAVQ
CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFEMMQIPLSAFQIAGGLVLLIFALTMIFGEGKPENEIKMQTSLSELAVYPLAVPSIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PGAMMAIVLLTDNHRFSLTDQFITTLIMLAVLLITYFLLLAASKIQNVIGSVGASVISRV
CCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGLILAAVAVNNLLVGIQQFFGLAS
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]