Click here to switch to the map view.

The map label for this gene is 126208661

Identifier: 126208661

GI number: 126208661

Start: 1371916

End: 1373130

Strand: Reverse

Name: 126208661

Synonym: APL_1193

Alternate gene names: NA

Gene position: 1373130-1371916 (Counterclockwise)

Preceding gene: 126208662

Following gene: 126208658

Centisome position: 60.37

GC content: 31.6

Gene sequence:

>1215_bases
ATGGTAGTTAATTATATTAAGTTTAACGATACTGAAATTGAATTTATTGATGGTGATCGAGGCATTCATTATCCTAAAAA
AGAAGAATTTAGTTCATCAGGATATTGTGTTTTTTTAAATACAGGGAACGTTACTTCTAATGGTTTTAATTTTAATGATT
TAGATTTTATTACTAAAGAAAAAGACGAATTATTAAGAAAAGGAAGAGTAATACCCCACGACATTGTATTAACGACTCGT
GGAACTGTTGGAAATGTTGCTTATGTTTCAGAAAATGAGTTATATAAAAATATACGAATTAATTCAGGTATGGTAATAAT
TCGGTCTGATTGTTCAAAATATGAACCTTACTTTTTATATTCATTCTTTAGGTCTGAATTATTTAAAAAACAATGTGAAT
ATAATGGTTCAGGATCGGCACAACCACAATTACCTATTTCAGCTTTAAAAAATATATCATTTCCAAATTTTAATTTAGAA
ACCCAACAAAAAATCGCCCAAGTGCTGTCCACATTGGATCGCAAAATTGCCCTAAATCAGCAAATTAGCGCCAAACTAGA
AAAAATGGCGAAAACACTCTACGACTACTGGTTTGTGCAATTCGACTTCCCCGATGAAAACGGCAACCCCTACAAATCAT
CAGGCGGCGAAATGGTTTATAACCCCGAACTGAAAAGAGATGTGCCGAAAGGGTGGGAGTGTGATTTCGTAGAAAACTAT
TTAGACAAAGTTCCCAATACAGATAAAATCCCAAGTAAAGAAATTCAAGTAAAAGGACAAATTCCAGTTATTGATCAAAG
CCAAGATTATATTTGTGGATTTACTGATAATGAAAATGCGTTATTAGAACCAATAGATGCTCATATTATTTTTGGTGATC
ACACAAGAGTAGTGAAATTAGTTAATTTCCCTTATGCTCGAGGTGCAGATGGAACACAAATAATTATTTCAAATAATAAA
AAACTACCTAATTTTTTATTTTACCAGATGATAGCAAAGATAGATTTATCTAATTATGGCTATGCTCGACATTATAAATT
TTTGAAAGAAAGCAAGGTTTTAATTCCAACAGAATATATTGCTCAAAAATATCATCAAACAGTTAAACCATATTTTGATT
TATGGAAAACAAATCTCAAAGAAACCCAAAAACTTACCCAACTCCGAGATTTTCTCTTGCCAATGCTAATGAATGGACAG
GTTGAGGTGGTCTAG

Upstream 100 bases:

>100_bases
TTTTTGCCGAAAGCAAGGCGTTAGAAAGCCAAATTCAGCAACAAATGGCAACATTAAAATTTAACGCACAAGTGGTGGAA
AATTAGGGGAAGTTTGCGAG

Downstream 100 bases:

>100_bases
GGTGGAAAAGAGGACGCACACAGTGCGTCCCTACCATGACTACCGAATTTGGTATTAAAGGAGAAGCGAATTGCACAACA
CCATGCCTAAAATTAACATT

Product: putative type I restriction-modification system, S subunit

Products: NA

Alternate protein names: S.MjaXP; Type I restriction enzyme MjaXP specificity protein; S protein [H]

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MVVNYIKFNDTEIEFIDGDRGIHYPKKEEFSSSGYCVFLNTGNVTSNGFNFNDLDFITKEKDELLRKGRVIPHDIVLTTR
GTVGNVAYVSENELYKNIRINSGMVIIRSDCSKYEPYFLYSFFRSELFKKQCEYNGSGSAQPQLPISALKNISFPNFNLE
TQQKIAQVLSTLDRKIALNQQISAKLEKMAKTLYDYWFVQFDFPDENGNPYKSSGGEMVYNPELKRDVPKGWECDFVENY
LDKVPNTDKIPSKEIQVKGQIPVIDQSQDYICGFTDNENALLEPIDAHIIFGDHTRVVKLVNFPYARGADGTQIIISNNK
KLPNFLFYQMIAKIDLSNYGYARHYKFLKESKVLIPTEYIAQKYHQTVKPYFDLWKTNLKETQKLTQLRDFLLPMLMNGQ
VEVV

Sequences:

>Translated_404_residues
MVVNYIKFNDTEIEFIDGDRGIHYPKKEEFSSSGYCVFLNTGNVTSNGFNFNDLDFITKEKDELLRKGRVIPHDIVLTTR
GTVGNVAYVSENELYKNIRINSGMVIIRSDCSKYEPYFLYSFFRSELFKKQCEYNGSGSAQPQLPISALKNISFPNFNLE
TQQKIAQVLSTLDRKIALNQQISAKLEKMAKTLYDYWFVQFDFPDENGNPYKSSGGEMVYNPELKRDVPKGWECDFVENY
LDKVPNTDKIPSKEIQVKGQIPVIDQSQDYICGFTDNENALLEPIDAHIIFGDHTRVVKLVNFPYARGADGTQIIISNNK
KLPNFLFYQMIAKIDLSNYGYARHYKFLKESKVLIPTEYIAQKYHQTVKPYFDLWKTNLKETQKLTQLRDFLLPMLMNGQ
VEVV
>Mature_404_residues
MVVNYIKFNDTEIEFIDGDRGIHYPKKEEFSSSGYCVFLNTGNVTSNGFNFNDLDFITKEKDELLRKGRVIPHDIVLTTR
GTVGNVAYVSENELYKNIRINSGMVIIRSDCSKYEPYFLYSFFRSELFKKQCEYNGSGSAQPQLPISALKNISFPNFNLE
TQQKIAQVLSTLDRKIALNQQISAKLEKMAKTLYDYWFVQFDFPDENGNPYKSSGGEMVYNPELKRDVPKGWECDFVENY
LDKVPNTDKIPSKEIQVKGQIPVIDQSQDYICGFTDNENALLEPIDAHIIFGDHTRVVKLVNFPYARGADGTQIIISNNK
KLPNFLFYQMIAKIDLSNYGYARHYKFLKESKVLIPTEYIAQKYHQTVKPYFDLWKTNLKETQKLTQLRDFLLPMLMNGQ
VEVV

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 46713; Mature: 46713

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVNYIKFNDTEIEFIDGDRGIHYPKKEEFSSSGYCVFLNTGNVTSNGFNFNDLDFITKE
CEEEEEEECCCEEEEEECCCCCCCCCHHCCCCCCEEEEEECCCEECCCCCCCCCHHHHCC
KDELLRKGRVIPHDIVLTTRGTVGNVAYVSENELYKNIRINSGMVIIRSDCSKYEPYFLY
HHHHHHCCCCCCCEEEEEECCCCCCEEEEECCHHHHEEEECCCEEEEECCCCCCCCHHHH
SFFRSELFKKQCEYNGSGSAQPQLPISALKNISFPNFNLETQQKIAQVLSTLDRKIALNQ
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QISAKLEKMAKTLYDYWFVQFDFPDENGNPYKSSGGEMVYNPELKRDVPKGWECDFVENY
HHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCHHHHHH
LDKVPNTDKIPSKEIQVKGQIPVIDQSQDYICGFTDNENALLEPIDAHIIFGDHTRVVKL
HHHCCCCCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCEECCCCEEEEECCCCEEEEE
VNFPYARGADGTQIIISNNKKLPNFLFYQMIAKIDLSNYGYARHYKFLKESKVLIPTEYI
ECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCHHHH
AQKYHQTVKPYFDLWKTNLKETQKLTQLRDFLLPMLMNGQVEVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
>Mature Secondary Structure
MVVNYIKFNDTEIEFIDGDRGIHYPKKEEFSSSGYCVFLNTGNVTSNGFNFNDLDFITKE
CEEEEEEECCCEEEEEECCCCCCCCCHHCCCCCCEEEEEECCCEECCCCCCCCCHHHHCC
KDELLRKGRVIPHDIVLTTRGTVGNVAYVSENELYKNIRINSGMVIIRSDCSKYEPYFLY
HHHHHHCCCCCCCEEEEEECCCCCCEEEEECCHHHHEEEECCCEEEEECCCCCCCCHHHH
SFFRSELFKKQCEYNGSGSAQPQLPISALKNISFPNFNLETQQKIAQVLSTLDRKIALNQ
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QISAKLEKMAKTLYDYWFVQFDFPDENGNPYKSSGGEMVYNPELKRDVPKGWECDFVENY
HHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCHHHHHH
LDKVPNTDKIPSKEIQVKGQIPVIDQSQDYICGFTDNENALLEPIDAHIIFGDHTRVVKL
HHHCCCCCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCEECCCCEEEEECCCCEEEEE
VNFPYARGADGTQIIISNNKKLPNFLFYQMIAKIDLSNYGYARHYKFLKESKVLIPTEYI
ECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCHHHH
AQKYHQTVKPYFDLWKTNLKETQKLTQLRDFLLPMLMNGQVEVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]