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The map label for this gene is qseB [H]

Identifier: 126208535

GI number: 126208535

Start: 1231690

End: 1232355

Strand: Direct

Name: qseB [H]

Synonym: APL_1063

Alternate gene names: 126208535

Gene position: 1231690-1232355 (Clockwise)

Preceding gene: 126208534

Following gene: 126208536

Centisome position: 54.15

GC content: 39.34

Gene sequence:

>666_bases
ATGCGTATTCTACTGATTGAAGACGACAAACTAATCGGTGACGGCTTAAAGCTGGGACTAACCAAACAAAATTTTGTCGT
TGATTGGTTCCAAGACGGTAAATTAGGCTTTGAAGCGTTATTCTCTACCGAATATGATGCGGTCGTTTTGGATTTAACGT
TACCTAAAATGGACGGCTTAGCCATTCTGAAAAATTGGCGTAAAGAAAATCTGGATATTCCGGTTTTAATCTTAACCGCA
AGGGATACGTTAGACGAAAGAATATTGGGATTTAATTCCGGTGCGGACGATTATCTCTGTAAGCCGTTTGCATTAATGGA
AGTGGTCGTCCGTTTACAAGCTCTAATTCGCCGCCGTTATAAACAGAGTTCCACCGAAATTACTCTCGGTGATCTGACGA
TTGACAGCAGTACCCACAAAGTAACCCTTGCCGATAAAGAAATCAATTTAACCTCGAAAGAATTTCAATTGCTGTTACTG
TTTGCCAGTAATAAAGATCGTGTTTTGACGCGTTCCGCTATCGAAGAAAAATTATACAGTTGGGATAACGACGTCAGCAG
TAACGCTATGGAAGTTTATATCCATAATTTACGTAAAAAACTCGGTAAAGAATGGATCAAAACCGTACACGGCATAGGTT
ATAAAATAGGAAATTCAGATGCTTAA

Upstream 100 bases:

>100_bases
AAAGTACAATAATTCTTATTTATTAATCAGTTATACAAGCGGTCGATTTTTGCAAAATTTCAGCAAATTTAGACCGCTTG
TCGCTTTATCGGACAATAAT

Downstream 100 bases:

>100_bases
ACGCTTTGCTAACAATAGTTTACGTTTTAGATTGATCGTTATTTTATCCGGTATCAGCCTACTCATTTGGTTTACCGCCA
CAGCGATAGAATGGTTTAAA

Product: transcriptional regulatory protein QseB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRILLIEDDKLIGDGLKLGLTKQNFVVDWFQDGKLGFEALFSTEYDAVVLDLTLPKMDGLAILKNWRKENLDIPVLILTA
RDTLDERILGFNSGADDYLCKPFALMEVVVRLQALIRRRYKQSSTEITLGDLTIDSSTHKVTLADKEINLTSKEFQLLLL
FASNKDRVLTRSAIEEKLYSWDNDVSSNAMEVYIHNLRKKLGKEWIKTVHGIGYKIGNSDA

Sequences:

>Translated_221_residues
MRILLIEDDKLIGDGLKLGLTKQNFVVDWFQDGKLGFEALFSTEYDAVVLDLTLPKMDGLAILKNWRKENLDIPVLILTA
RDTLDERILGFNSGADDYLCKPFALMEVVVRLQALIRRRYKQSSTEITLGDLTIDSSTHKVTLADKEINLTSKEFQLLLL
FASNKDRVLTRSAIEEKLYSWDNDVSSNAMEVYIHNLRKKLGKEWIKTVHGIGYKIGNSDA
>Mature_221_residues
MRILLIEDDKLIGDGLKLGLTKQNFVVDWFQDGKLGFEALFSTEYDAVVLDLTLPKMDGLAILKNWRKENLDIPVLILTA
RDTLDERILGFNSGADDYLCKPFALMEVVVRLQALIRRRYKQSSTEITLGDLTIDSSTHKVTLADKEINLTSKEFQLLLL
FASNKDRVLTRSAIEEKLYSWDNDVSSNAMEVYIHNLRKKLGKEWIKTVHGIGYKIGNSDA

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=58.7155963302752, Blast_Score=265, Evalue=2e-72,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=42.1296296296296, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=37.1681415929204, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=37.1559633027523, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=33.0275229357798, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=30.6306306306306, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1788394, Length=221, Percent_Identity=31.2217194570136, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1786911, Length=220, Percent_Identity=28.1818181818182, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=29.4117647058824, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=28.8888888888889, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=30.5309734513274, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787229, Length=220, Percent_Identity=28.1818181818182, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=26.431718061674, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=31.0043668122271, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1790299, Length=134, Percent_Identity=32.089552238806, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1788550, Length=146, Percent_Identity=26.7123287671233, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25153; Mature: 25153

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLIEDDKLIGDGLKLGLTKQNFVVDWFQDGKLGFEALFSTEYDAVVLDLTLPKMDGL
CEEEEEECCCEECCCEEECEECCCEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCH
AILKNWRKENLDIPVLILTARDTLDERILGFNSGADDYLCKPFALMEVVVRLQALIRRRY
HHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHH
KQSSTEITLGDLTIDSSTHKVTLADKEINLTSKEFQLLLLFASNKDRVLTRSAIEEKLYS
HCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHC
WDNDVSSNAMEVYIHNLRKKLGKEWIKTVHGIGYKIGNSDA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCC
>Mature Secondary Structure
MRILLIEDDKLIGDGLKLGLTKQNFVVDWFQDGKLGFEALFSTEYDAVVLDLTLPKMDGL
CEEEEEECCCEECCCEEECEECCCEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCH
AILKNWRKENLDIPVLILTARDTLDERILGFNSGADDYLCKPFALMEVVVRLQALIRRRY
HHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHH
KQSSTEITLGDLTIDSSTHKVTLADKEINLTSKEFQLLLLFASNKDRVLTRSAIEEKLYS
HCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHC
WDNDVSSNAMEVYIHNLRKKLGKEWIKTVHGIGYKIGNSDA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]