| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is hugZ
Identifier: 126208522
GI number: 126208522
Start: 1218053
End: 1218574
Strand: Reverse
Name: hugZ
Synonym: APL_1048
Alternate gene names: NA
Gene position: 1218574-1218053 (Counterclockwise)
Preceding gene: 126208523
Following gene: 126208521
Centisome position: 53.58
GC content: 37.74
Gene sequence:
>522_bases ATGACAGCGAAAAATCGCCAAGAAGTATTACAAAATCGTTTAGGACCGGAAATTCAAGAATTAAAAAAAAATATTCAAAC TATTGTACTTTCGACGGTAGATAAAGACGGTAATCCGAACGTAAGCTACGCCCCTTTTGTGATTAATAACGGCGAATATC AAGTACTTATTTCAACCATTGCACGTCACGCCCGTAATTTAACGGAAGTACCGAAAGTATCGTTAATGCTGATTGACGAT GAAACGAAAAGCCGTCAAATTTTTGCTCGCCGCCGTTTAACGTTTGATGCGACTTCACGTTTAATTGAACGTGAAGGTGA AGAGTGGGAAAGTGGTTTAAAAGCATTAAAAGCACGCCATGGTGATCTTATTGATGAGCTTTCAAAAATGAAAGATTTCA ACTTATTCAGTTTTAAACCGACACAAGGCCTTTTCGTAAAAGGCTTTGGTAAAGCTTTCGAAGTAAGCTCGGATGATCTA GTGAATATCGTTCACCTAGATGAAGGTCATAAAACAGAATAA
Upstream 100 bases:
>100_bases TTTTTAGGATTGCGCAAATTAATGGGGTTAATATAATTAATAATCGTTTTTATTATCAATAATTTTGATAGAAATTTGAA TGAAAAATTAAGGAGATCTT
Downstream 100 bases:
>100_bases TTAAACATTTACTGTGCTAGTTTTGGCTAGCACAGTTTTTTTATCTTGTCTAAAGGAGAATGATTGTGATTAAGCTTCGT TTTAATCTATCTATTGCAGC
Product: heme utilization protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTAKNRQEVLQNRLGPEIQELKKNIQTIVLSTVDKDGNPNVSYAPFVINNGEYQVLISTIARHARNLTEVPKVSLMLIDD ETKSRQIFARRRLTFDATSRLIEREGEEWESGLKALKARHGDLIDELSKMKDFNLFSFKPTQGLFVKGFGKAFEVSSDDL VNIVHLDEGHKTE
Sequences:
>Translated_173_residues MTAKNRQEVLQNRLGPEIQELKKNIQTIVLSTVDKDGNPNVSYAPFVINNGEYQVLISTIARHARNLTEVPKVSLMLIDD ETKSRQIFARRRLTFDATSRLIEREGEEWESGLKALKARHGDLIDELSKMKDFNLFSFKPTQGLFVKGFGKAFEVSSDDL VNIVHLDEGHKTE >Mature_172_residues TAKNRQEVLQNRLGPEIQELKKNIQTIVLSTVDKDGNPNVSYAPFVINNGEYQVLISTIARHARNLTEVPKVSLMLIDDE TKSRQIFARRRLTFDATSRLIEREGEEWESGLKALKARHGDLIDELSKMKDFNLFSFKPTQGLFVKGFGKAFEVSSDDLV NIVHLDEGHKTE
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019595 - InterPro: IPR011576 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR014419 [H]
Pfam domain/function: PF10615 DUF2470; PF01243 Pyridox_oxidase [H]
EC number: NA
Molecular weight: Translated: 19687; Mature: 19555
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKNRQEVLQNRLGPEIQELKKNIQTIVLSTVDKDGNPNVSYAPFVINNGEYQVLISTI CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEECCCHHHHHHHH ARHARNLTEVPKVSLMLIDDETKSRQIFARRRLTFDATSRLIEREGEEWESGLKALKARH HHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHC GDLIDELSKMKDFNLFSFKPTQGLFVKGFGKAFEVSSDDLVNIVHLDEGHKTE CHHHHHHHHHCCCCCEEECCCCCEEEEECCCEEECCCCCEEEEEEECCCCCCC >Mature Secondary Structure TAKNRQEVLQNRLGPEIQELKKNIQTIVLSTVDKDGNPNVSYAPFVINNGEYQVLISTI CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEECCCHHHHHHHH ARHARNLTEVPKVSLMLIDDETKSRQIFARRRLTFDATSRLIEREGEEWESGLKALKARH HHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHC GDLIDELSKMKDFNLFSFKPTQGLFVKGFGKAFEVSSDDLVNIVHLDEGHKTE CHHHHHHHHHCCCCCEEECCCCCEEEEECCCEEECCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]