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The map label for this gene is ychE [H]

Identifier: 126208476

GI number: 126208476

Start: 1165071

End: 1165724

Strand: Reverse

Name: ychE [H]

Synonym: APL_1002

Alternate gene names: 126208476

Gene position: 1165724-1165071 (Counterclockwise)

Preceding gene: 126208477

Following gene: 126208475

Centisome position: 51.25

GC content: 40.83

Gene sequence:

>654_bases
GTGGAAATCGATCTTAATCTTGCTATTTATCTTCAATTTTTTATTGGATTATTCGCGATTGTGAATCCGTTCGGTTCACT
TCCCATTTTTTTCGGTATGACCGCTCATCAATATGAGGCGGAAAGAAATCATACGAGCTTAGTTACTTCGGTATCCATCG
GTGTTATTTTACTGGTCAGTTTATTTTTCGGTAAGTTTATCTTAGACGCTTTCAGCATTTCGCTGGATTCTTTCCGTGTT
GCCGGCGGTTTTCTAATTGTCAGTATCGCCATGACGATGATTAGCGGTAAACTCGGAGAACATAAACAAAATAAAGAAGA
AAAGAATGCGGATGTCAGCGAATACGAAAATATCGGCGTAGTCCCGCTTGCAATGCCGATTATGGCGGGGCCGGGCGCAA
TCGGTTCGACGATCGTATGGGGAACTCGTTATCATCAAGTTACGGATTATATCGGATTCAGTGCGGCGATTATTTTATTT
GCAACGGTATGTTATATCTTATTCCGTTTTTCCGCACCGTTAGTGAAAAAATTAGGTAAAACGGGATCGAATGTGGTTAC
TCGTATTATGGGGCTGATCCTCATGGCTTTAGGTATAGAAATTATTGTAGCTGGGCTTAGTAATTTATTTCCGGGATTAA
CTTCCGTTCATTAG

Upstream 100 bases:

>100_bases
AAAACGCCTAAAACTGATATGTTCTAGGCGTTTTTGTTTTGTCTTATTTTTCTTACTCTATATAATAACGCATAATTCCC
TCTTAGAAGGCTGGTGAGCT

Downstream 100 bases:

>100_bases
AAGGATAGAATGAGATGCACTCTGCGAAACAAGCGGTCAAATTTTTCCAAAATCTTGTCGGTTTATTAGCTTGTTTGCTT
ATATTATCCGCCTGTGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MEIDLNLAIYLQFFIGLFAIVNPFGSLPIFFGMTAHQYEAERNHTSLVTSVSIGVILLVSLFFGKFILDAFSISLDSFRV
AGGFLIVSIAMTMISGKLGEHKQNKEEKNADVSEYENIGVVPLAMPIMAGPGAIGSTIVWGTRYHQVTDYIGFSAAIILF
ATVCYILFRFSAPLVKKLGKTGSNVVTRIMGLILMALGIEIIVAGLSNLFPGLTSVH

Sequences:

>Translated_217_residues
MEIDLNLAIYLQFFIGLFAIVNPFGSLPIFFGMTAHQYEAERNHTSLVTSVSIGVILLVSLFFGKFILDAFSISLDSFRV
AGGFLIVSIAMTMISGKLGEHKQNKEEKNADVSEYENIGVVPLAMPIMAGPGAIGSTIVWGTRYHQVTDYIGFSAAIILF
ATVCYILFRFSAPLVKKLGKTGSNVVTRIMGLILMALGIEIIVAGLSNLFPGLTSVH
>Mature_217_residues
MEIDLNLAIYLQFFIGLFAIVNPFGSLPIFFGMTAHQYEAERNHTSLVTSVSIGVILLVSLFFGKFILDAFSISLDSFRV
AGGFLIVSIAMTMISGKLGEHKQNKEEKNADVSEYENIGVVPLAMPIMAGPGAIGSTIVWGTRYHQVTDYIGFSAAIILF
ATVCYILFRFSAPLVKKLGKTGSNVVTRIMGLILMALGIEIIVAGLSNLFPGLTSVH

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=208, Percent_Identity=59.6153846153846, Blast_Score=254, Evalue=3e-69,
Organism=Escherichia coli, GI1787809, Length=196, Percent_Identity=32.1428571428571, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1789842, Length=198, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 23501; Mature: 23501

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIDLNLAIYLQFFIGLFAIVNPFGSLPIFFGMTAHQYEAERNHTSLVTSVSIGVILLVS
CEECCHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
LFFGKFILDAFSISLDSFRVAGGFLIVSIAMTMISGKLGEHKQNKEEKNADVSEYENIGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHCCCHHHHHCCCC
VPLAMPIMAGPGAIGSTIVWGTRYHQVTDYIGFSAAIILFATVCYILFRFSAPLVKKLGK
HHHHHHHHCCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
TGSNVVTRIMGLILMALGIEIIVAGLSNLFPGLTSVH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MEIDLNLAIYLQFFIGLFAIVNPFGSLPIFFGMTAHQYEAERNHTSLVTSVSIGVILLVS
CEECCHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
LFFGKFILDAFSISLDSFRVAGGFLIVSIAMTMISGKLGEHKQNKEEKNADVSEYENIGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHCCCHHHHHCCCC
VPLAMPIMAGPGAIGSTIVWGTRYHQVTDYIGFSAAIILFATVCYILFRFSAPLVKKLGK
HHHHHHHHCCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
TGSNVVTRIMGLILMALGIEIIVAGLSNLFPGLTSVH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]