| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208429
Identifier: 126208429
GI number: 126208429
Start: 1094115
End: 1094549
Strand: Direct
Name: 126208429
Synonym: APL_0953
Alternate gene names: NA
Gene position: 1094115-1094549 (Clockwise)
Preceding gene: 126208428
Following gene: 126208434
Centisome position: 48.1
GC content: 39.77
Gene sequence:
>435_bases ATGGCAAAGAAAATCTATTTAAATCAAATTCAGGCGAAAATTGACCGCTTGCAGCGTGAGCGTAAGCAAGTGCTAGAACA TCTTGCTTTGGTGGAGAGTAAGCTTGATAAACTACAAGCAGCTATTGAGGTTATGCAATCAGAAGCCCTAACTGATGAAT ACGATACGGAGCTTTATACTTATCAAACTCATAAACGCCATTTCAAAGGCAAGTTACGCCAAATGGTGCTGGCAGAGATG AAGGCTCAACCAAATCATGAATTTACCGTTAATGAATTGATTAAGCTCGTCCTTATTCGAGATAAACAAGAACCAATCAT TCAACCGCAGCATACTGTTTCCGTGCGTGGTGCATTGAAACACTGGCTTAATAAAGGTGTGGTAGAACGAGTAGCATTAA AGGCAAATGATGTGCGGTGGAAATTGAAAATATAA
Upstream 100 bases:
>100_bases TCAATGATATCACCAGCAAATGCCTTTCTACACCATCAGAAAACGCTTGGAAAGGCTATTGGCAAGGACACCACAGACAA GTAGAACGGTTGGTAATGTA
Downstream 100 bases:
>100_bases CTAAATTGCCTTCAAACGCCAATAACACGTTTTACCTTCTAGCTTTTTCTCAACTAATGAATGCTTAACAAGATGATTTA GTGTACTGTGAATGGTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MAKKIYLNQIQAKIDRLQRERKQVLEHLALVESKLDKLQAAIEVMQSEALTDEYDTELYTYQTHKRHFKGKLRQMVLAEM KAQPNHEFTVNELIKLVLIRDKQEPIIQPQHTVSVRGALKHWLNKGVVERVALKANDVRWKLKI
Sequences:
>Translated_144_residues MAKKIYLNQIQAKIDRLQRERKQVLEHLALVESKLDKLQAAIEVMQSEALTDEYDTELYTYQTHKRHFKGKLRQMVLAEM KAQPNHEFTVNELIKLVLIRDKQEPIIQPQHTVSVRGALKHWLNKGVVERVALKANDVRWKLKI >Mature_143_residues AKKIYLNQIQAKIDRLQRERKQVLEHLALVESKLDKLQAAIEVMQSEALTDEYDTELYTYQTHKRHFKGKLRQMVLAEMK AQPNHEFTVNELIKLVLIRDKQEPIIQPQHTVSVRGALKHWLNKGVVERVALKANDVRWKLKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16975; Mature: 16844
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKIYLNQIQAKIDRLQRERKQVLEHLALVESKLDKLQAAIEVMQSEALTDEYDTELYT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHH YQTHKRHFKGKLRQMVLAEMKAQPNHEFTVNELIKLVLIRDKQEPIIQPQHTVSVRGALK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH HWLNKGVVERVALKANDVRWKLKI HHHHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure AKKIYLNQIQAKIDRLQRERKQVLEHLALVESKLDKLQAAIEVMQSEALTDEYDTELYT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHH YQTHKRHFKGKLRQMVLAEMKAQPNHEFTVNELIKLVLIRDKQEPIIQPQHTVSVRGALK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH HWLNKGVVERVALKANDVRWKLKI HHHHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA