Click here to switch to the map view.

The map label for this gene is 126208428

Identifier: 126208428

GI number: 126208428

Start: 1093033

End: 1094115

Strand: Direct

Name: 126208428

Synonym: APL_0952

Alternate gene names: NA

Gene position: 1093033-1094115 (Clockwise)

Preceding gene: 126208424

Following gene: 126208429

Centisome position: 48.06

GC content: 38.23

Gene sequence:

>1083_bases
ATGATTAAATCATCTGTATATACCCGATATTGTACATTTTTTTTATTTATGGCACAAAGTTTTTTGTTATCTAGCTCTGC
AAGAAAATTAAGTCCGCTTAAGATAGCTCGTCTATCTGATGCAGACGCATTTTCTTTATTGCATGAATTACGCTGGAGAA
GTAAAAATGAACAAGTTTGCCCTAAATGTGGTGTACAACATCAAGCCTATTTCATCTCTACTCGTAAACAATGGCGTTGC
AAACATTGCAGACACACGTTTAGCATTACATCAGGGACAATTTTTGCGAATCATAAACTGCCGATTCAAACCTATTTATT
CGCTATTGCTTTGTTTGTGAATGCGGTAAAAGGCATTTCAGCTTGCCAACTCTCTCGAGATTTAAACGTACAGTACAAAA
CCGCTTTTACTTTATCACATAAAATCCGTGAAAGTTTGATTGTACAGCGTGAGCTTTTTCCCTTATCAGGCGAAATCCAT
ATTGATGGTACTTACGTGCATTCTGCTCCACGTCCAAAGAATAAGAAAGCAGAACGTGTGGATAGACGTTTAAAACAAAA
TGCCAATCCAAATAAACGTGGCGTACTGGTAATGCGTGAACGTTACACTGAACAGGACGCTTTATTTAATCCGCAACTAG
TCGGCGCAAAAAGAACCATCACGTTTCCTATTTTGTCAGAAAATTCAGAAAGCGTGAAGAAATTGGCTACTGCATATATT
GAGCCCAACAGCCGTATTCATGCGGACGAAAACTCAGCTTATGATGAATTGATGGTGAATTACGACCTACAACGAGTAAA
CCATCAACGTGAATATCGTAGCGATGATGGTATAACTAACAATCTTGCCGAAAGTTACTTTGCACGTTTCAAACGAATGT
ATTACGGACAAGTCCACAAGATGAGTAACATCTATCTTGATAACTATGCCAATGAAGTCGCTTATCGTGAAGATACTCGT
AAACTAGATAATTTAACGATTTTCAATGATATCACCAGCAAATGCCTTTCTACACCATCAGAAAACGCTTGGAAAGGCTA
TTGGCAAGGACACCACAGACAAGTAGAACGGTTGGTAATGTAA

Upstream 100 bases:

>100_bases
AAGGCTTTGATATTCAAACCTTTATACTCCATTACTTCTCTTAAACGGTTATTTATACTCATTTTTGTATCCCATATTGA
CTTTTATGTAGTTTTTGAGT

Downstream 100 bases:

>100_bases
TGGCAAAGAAAATCTATTTAAATCAAATTCAGGCGAAAATTGACCGCTTGCAGCGTGAGCGTAAGCAAGTGCTAGAACAT
CTTGCTTTGGTGGAGAGTAA

Product: putative transposase

Products: NA

Alternate protein names: ISSpo8 Transposase; ISSpo3 Transposase; ISXo2 Transposase; ISSod11 Transposase; Insertion Element Protein; ISXo2 Transposase; ISH4-Type Transposase; ISSst2 Family IS; Conserved Transposase; ISRssp2 Family IS; Unclassified Family Transposase; Transposase And Inactivated Derivative

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MIKSSVYTRYCTFFLFMAQSFLLSSSARKLSPLKIARLSDADAFSLLHELRWRSKNEQVCPKCGVQHQAYFISTRKQWRC
KHCRHTFSITSGTIFANHKLPIQTYLFAIALFVNAVKGISACQLSRDLNVQYKTAFTLSHKIRESLIVQRELFPLSGEIH
IDGTYVHSAPRPKNKKAERVDRRLKQNANPNKRGVLVMRERYTEQDALFNPQLVGAKRTITFPILSENSESVKKLATAYI
EPNSRIHADENSAYDELMVNYDLQRVNHQREYRSDDGITNNLAESYFARFKRMYYGQVHKMSNIYLDNYANEVAYREDTR
KLDNLTIFNDITSKCLSTPSENAWKGYWQGHHRQVERLVM

Sequences:

>Translated_360_residues
MIKSSVYTRYCTFFLFMAQSFLLSSSARKLSPLKIARLSDADAFSLLHELRWRSKNEQVCPKCGVQHQAYFISTRKQWRC
KHCRHTFSITSGTIFANHKLPIQTYLFAIALFVNAVKGISACQLSRDLNVQYKTAFTLSHKIRESLIVQRELFPLSGEIH
IDGTYVHSAPRPKNKKAERVDRRLKQNANPNKRGVLVMRERYTEQDALFNPQLVGAKRTITFPILSENSESVKKLATAYI
EPNSRIHADENSAYDELMVNYDLQRVNHQREYRSDDGITNNLAESYFARFKRMYYGQVHKMSNIYLDNYANEVAYREDTR
KLDNLTIFNDITSKCLSTPSENAWKGYWQGHHRQVERLVM
>Mature_360_residues
MIKSSVYTRYCTFFLFMAQSFLLSSSARKLSPLKIARLSDADAFSLLHELRWRSKNEQVCPKCGVQHQAYFISTRKQWRC
KHCRHTFSITSGTIFANHKLPIQTYLFAIALFVNAVKGISACQLSRDLNVQYKTAFTLSHKIRESLIVQRELFPLSGEIH
IDGTYVHSAPRPKNKKAERVDRRLKQNANPNKRGVLVMRERYTEQDALFNPQLVGAKRTITFPILSENSESVKKLATAYI
EPNSRIHADENSAYDELMVNYDLQRVNHQREYRSDDGITNNLAESYFARFKRMYYGQVHKMSNIYLDNYANEVAYREDTR
KLDNLTIFNDITSKCLSTPSENAWKGYWQGHHRQVERLVM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41944; Mature: 41944

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSSVYTRYCTFFLFMAQSFLLSSSARKLSPLKIARLSDADAFSLLHELRWRSKNEQVC
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCC
PKCGVQHQAYFISTRKQWRCKHCRHTFSITSGTIFANHKLPIQTYLFAIALFVNAVKGIS
HHCCCCCEEEEEECCHHHHHHHHHHEEEECCCEEEECCCCCHHHHHHHHHHHHHHHCCHH
ACQLSRDLNVQYKTAFTLSHKIRESLIVQRELFPLSGEIHIDGTYVHSAPRPKNKKAERV
HHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEECEEEEECCCCCCCCHHHHH
DRRLKQNANPNKRGVLVMRERYTEQDALFNPQLVGAKRTITFPILSENSESVKKLATAYI
HHHHHHCCCCCCCCEEEEHHHCCCHHHCCCCCEECCCEEEEEEEECCCHHHHHHHHHHHC
EPNSRIHADENSAYDELMVNYDLQRVNHQREYRSDDGITNNLAESYFARFKRMYYGQVHK
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MSNIYLDNYANEVAYREDTRKLDNLTIFNDITSKCLSTPSENAWKGYWQGHHRQVERLVM
HHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKSSVYTRYCTFFLFMAQSFLLSSSARKLSPLKIARLSDADAFSLLHELRWRSKNEQVC
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCC
PKCGVQHQAYFISTRKQWRCKHCRHTFSITSGTIFANHKLPIQTYLFAIALFVNAVKGIS
HHCCCCCEEEEEECCHHHHHHHHHHEEEECCCEEEECCCCCHHHHHHHHHHHHHHHCCHH
ACQLSRDLNVQYKTAFTLSHKIRESLIVQRELFPLSGEIHIDGTYVHSAPRPKNKKAERV
HHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEECEEEEECCCCCCCCHHHHH
DRRLKQNANPNKRGVLVMRERYTEQDALFNPQLVGAKRTITFPILSENSESVKKLATAYI
HHHHHHCCCCCCCCEEEEHHHCCCHHHCCCCCEECCCEEEEEEEECCCHHHHHHHHHHHC
EPNSRIHADENSAYDELMVNYDLQRVNHQREYRSDDGITNNLAESYFARFKRMYYGQVHK
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MSNIYLDNYANEVAYREDTRKLDNLTIFNDITSKCLSTPSENAWKGYWQGHHRQVERLVM
HHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA