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The map label for this gene is yhhJ [H]

Identifier: 126208315

GI number: 126208315

Start: 973456

End: 974580

Strand: Direct

Name: yhhJ [H]

Synonym: APL_0839

Alternate gene names: 126208315

Gene position: 973456-974580 (Clockwise)

Preceding gene: 126208314

Following gene: 126208316

Centisome position: 42.8

GC content: 41.42

Gene sequence:

>1125_bases
ATGTTACGTTGGTTCAAAAATGTGGCATTTCTTTCAGCCAAAGAATTTAAAAGCCTCTTTAGTGATAAAGTATTGGTGGC
GATGATTATCTATATGTTTTCCGCTGCCATATTGACGATTGCTAAGCAAGGTATGACGGATGTCAAAAACGGTTCCGTTG
CGATTGTCGATTATGATCACTCTACACTGTCGTATCGCTTACAAGATGCTCTGATTCCTCCCTACTTCAAAACCGTTGAA
GAGGTAAAAGCCGACCAAGTCGAATATCTAATGGATAACGGTAAATTTACGTTTGTAGTCGAAATCCCAGCTAATTTCCA
ACGAGATCTCTCAAGCGGTAAGTCGCCGCATTTACAACTTTTAGTCGATGCCACCGCAATGACACAAGCGAATATTGGTT
CTTCTTATATTACACAAATTTTTAATCGAGAAATTCAGCAATTTCTTGGTATCAGTGCGTTACAAGCTCCCATAAATGTG
GTCGCTAATGTTTTATATAACCCTAACCATTCAAGCGAATGGTTTATGGGAACGGTACAAATTGTCGGTAATTTAACGCT
TCTAACTCTACTTTTAGCGGGCTCGGCAGTGATTCGAGAACGGGAACGAGGTACGCTAGAACATCTATTGGTAATGCCCG
TGCGTGCCAGTGAAATTATGACGGCTAAAATTCTTGCTAATGGTTTGGTATTATTAGTAACCTCCGGCTTTTCTTTAAAA
ATCGTAGTCGCGGGCATATTAGGTACGCCGCTGGTAAATCAGCAAATTGCTATTTTCATCTTAGGAGCAGCAATTTTTCT
GTTTTCCATTGCTTCATTAGGTATTTTACTCGCTGTATTTGCGCCGACAATGCCGCAATTCGGACTACTCTGTATGCCGA
TTTACCTCGTTCTCTATTTATTGTCCGGTTCAATGTCACCACTGGAAAATATGCCTCAGCTCGCACAAAGTCTAACCCAA
CTTTCTCCTGTCACCATGCTCGGCGCTTACGCTCAAGACGTGCTATTTCGTGGTGCAGGTCTTGATATGGTATGGCACTA
TTTAGCTAAAATGGCAATAGTGGGAGCTCTGTTTTTAAGCCCTGCCCTCTATCAATTTAAATCAATGCTCTCCAAACAGG
GATAA

Upstream 100 bases:

>100_bases
AGTTTTACTCAATTTGAGCAGAGTTATTTAGCTCTAGCCCTCATTTATTTTGTTTACCTCACACTTGCCACTTTGGCATT
AAAAAAACAGGAAAAGTAAT

Downstream 100 bases:

>100_bases
GAATATAGGAACAACTATGAAGATTGAGAAATATACCTCTTTTGCAATTTTTTGCTTAATTTTGACCGCTTGTCACAATC
AAGACGTTGCCAAATTGCAG

Product: inner membrane transport permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MLRWFKNVAFLSAKEFKSLFSDKVLVAMIIYMFSAAILTIAKQGMTDVKNGSVAIVDYDHSTLSYRLQDALIPPYFKTVE
EVKADQVEYLMDNGKFTFVVEIPANFQRDLSSGKSPHLQLLVDATAMTQANIGSSYITQIFNREIQQFLGISALQAPINV
VANVLYNPNHSSEWFMGTVQIVGNLTLLTLLLAGSAVIRERERGTLEHLLVMPVRASEIMTAKILANGLVLLVTSGFSLK
IVVAGILGTPLVNQQIAIFILGAAIFLFSIASLGILLAVFAPTMPQFGLLCMPIYLVLYLLSGSMSPLENMPQLAQSLTQ
LSPVTMLGAYAQDVLFRGAGLDMVWHYLAKMAIVGALFLSPALYQFKSMLSKQG

Sequences:

>Translated_374_residues
MLRWFKNVAFLSAKEFKSLFSDKVLVAMIIYMFSAAILTIAKQGMTDVKNGSVAIVDYDHSTLSYRLQDALIPPYFKTVE
EVKADQVEYLMDNGKFTFVVEIPANFQRDLSSGKSPHLQLLVDATAMTQANIGSSYITQIFNREIQQFLGISALQAPINV
VANVLYNPNHSSEWFMGTVQIVGNLTLLTLLLAGSAVIRERERGTLEHLLVMPVRASEIMTAKILANGLVLLVTSGFSLK
IVVAGILGTPLVNQQIAIFILGAAIFLFSIASLGILLAVFAPTMPQFGLLCMPIYLVLYLLSGSMSPLENMPQLAQSLTQ
LSPVTMLGAYAQDVLFRGAGLDMVWHYLAKMAIVGALFLSPALYQFKSMLSKQG
>Mature_374_residues
MLRWFKNVAFLSAKEFKSLFSDKVLVAMIIYMFSAAILTIAKQGMTDVKNGSVAIVDYDHSTLSYRLQDALIPPYFKTVE
EVKADQVEYLMDNGKFTFVVEIPANFQRDLSSGKSPHLQLLVDATAMTQANIGSSYITQIFNREIQQFLGISALQAPINV
VANVLYNPNHSSEWFMGTVQIVGNLTLLTLLLAGSAVIRERERGTLEHLLVMPVRASEIMTAKILANGLVLLVTSGFSLK
IVVAGILGTPLVNQQIAIFILGAAIFLFSIASLGILLAVFAPTMPQFGLLCMPIYLVLYLLSGSMSPLENMPQLAQSLTQ
LSPVTMLGAYAQDVLFRGAGLDMVWHYLAKMAIVGALFLSPALYQFKSMLSKQG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI226510979, Length=372, Percent_Identity=40.3225806451613, Blast_Score=273, Evalue=1e-74,
Organism=Escherichia coli, GI1787010, Length=377, Percent_Identity=28.1167108753316, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40974; Mature: 40974

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRWFKNVAFLSAKEFKSLFSDKVLVAMIIYMFSAAILTIAKQGMTDVKNGSVAIVDYDH
CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
STLSYRLQDALIPPYFKTVEEVKADQVEYLMDNGKFTFVVEIPANFQRDLSSGKSPHLQL
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCCEEE
LVDATAMTQANIGSSYITQIFNREIQQFLGISALQAPINVVANVLYNPNHSSEWFMGTVQ
EEEHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IVGNLTLLTLLLAGSAVIRERERGTLEHLLVMPVRASEIMTAKILANGLVLLVTSGFSLK
HHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCEEE
IVVAGILGTPLVNQQIAIFILGAAIFLFSIASLGILLAVFAPTMPQFGLLCMPIYLVLYL
EEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LSGSMSPLENMPQLAQSLTQLSPVTMLGAYAQDVLFRGAGLDMVWHYLAKMAIVGALFLS
HCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
PALYQFKSMLSKQG
HHHHHHHHHHHCCC
>Mature Secondary Structure
MLRWFKNVAFLSAKEFKSLFSDKVLVAMIIYMFSAAILTIAKQGMTDVKNGSVAIVDYDH
CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
STLSYRLQDALIPPYFKTVEEVKADQVEYLMDNGKFTFVVEIPANFQRDLSSGKSPHLQL
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCCEEE
LVDATAMTQANIGSSYITQIFNREIQQFLGISALQAPINVVANVLYNPNHSSEWFMGTVQ
EEEHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IVGNLTLLTLLLAGSAVIRERERGTLEHLLVMPVRASEIMTAKILANGLVLLVTSGFSLK
HHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCEEE
IVVAGILGTPLVNQQIAIFILGAAIFLFSIASLGILLAVFAPTMPQFGLLCMPIYLVLYL
EEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LSGSMSPLENMPQLAQSLTQLSPVTMLGAYAQDVLFRGAGLDMVWHYLAKMAIVGALFLS
HCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
PALYQFKSMLSKQG
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8387990 [H]