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The map label for this gene is yibP [C]

Identifier: 126208307

GI number: 126208307

Start: 964740

End: 965939

Strand: Reverse

Name: yibP [C]

Synonym: APL_0831

Alternate gene names: 126208307

Gene position: 965939-964740 (Counterclockwise)

Preceding gene: 126208309

Following gene: 126208306

Centisome position: 42.47

GC content: 43.33

Gene sequence:

>1200_bases
GTGAAAGTCTTTCGTCCGTTTTATGTCATTCCGCTATTGATTTGTTTTAGCGTATTCGTTCAGTCATCTTATGCGACTGA
GCTTTCCAGTATTCAGCAAAAAATTAAACAACAACAAAGTAAAATTAACGAACAACGTCAAAAACGTAGTGTGCTGCAAT
CTACGTTGAAAACGCAAGAAATCGAGATGGGTAAGGTATTGGGTAAACTTAAAGAAACCGAAATGTCTTTAACCGAAACT
CGCCAAGCGATTAAGCGTACCGAGCAGGAAATTCAAAGGCTGGAAAAGCAAGAAAAAGAACAAAAAGAGAAATTGAAAGA
GCAGCTGGATTCCGCTTATCGCTCCGGTATTCATCCTTCGGTATTGGAACGCTTGATGTCGGAAAGTGCTAAAAATGCGG
ACAGAATGACCGCTTATTATGCGCATATCAATCAAGTAAGAATCGATACGATTAACGATTTAAGACGTACGCAACAGGAA
TTAAAAGATCGTCGCGACGAGCTGAAAGGTCAGCAGAAAGGGCAACAGACACAATTAAGCGAACAAAAGAAACAAGAAAA
AGATTTAAAGAAAGTACAAAACGAACGTGAAACCACGTTGCGCTCAATTAATAAAACCTTAGAACAAGACGAAAGCCGTT
TAGAATCGTTAAAAAGTAATGAGGCGGCGTTACGTAATCAATTAGCCAAAGCGACGGCGGAATCCGAACGCCAAGAAGAG
CAGGAAATTGCCAAATTGGAGCAGAAAAAAAATAGTGAGGAAAAACGTAAAGCGACCGAGCAAGAAAAGCAACAAGTTAG
AGCCGGTAGAGGTTTAGGTTCGCCGAAGAAACAATTTAGTATGCCGGTGGCGGGGAAAGTGGTAAACAGTTTCGGTTCTC
GTCAAATGGGCGAAGTGACTTGGCACGGTGTCGTTATTGCGGCAAGCGCAGGTGCGTCGGTACGAGCGATTGCCGGCGGG
CGTGTAATTTTAGCCGATTGGTTGCAAGGTTACGGGCAAGTCGTCGTAATCGATCATGGTAACGGCGATATGTCGTTATA
CGGCTATAATCAATCGGTTTCGGTACGTAAAGGCAGCCGTGTTTCCGCCGGACAACAAATTGCCAGCGTAGGTAACTCCG
GCGGTCAAAATCGTTCGGCGTTATATTTTGAAATCCGTCGTAAAGGCAATCCGAAAAATCCGATGGGTTGGGTAAAATAA

Upstream 100 bases:

>100_bases
GATTTCTTTTTAGAAAAGCGAGAGAAAAGCTGATTTTCCTCAAATATTTGATAGAATAAGCTATTTTGTCGTCTTTAATT
GAGTTCCGTAGGTGGATTTT

Downstream 100 bases:

>100_bases
TGTGGAATTTATTTCAAAGTAAGCAGTCTATTTTTTCGGTTTTTTGGCAAATTTTGTTGCTGATTTCACCGCTTGCTCAA
GCGGGAAAATTAGCGATTGT

Product: membrane-bound metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKVFRPFYVIPLLICFSVFVQSSYATELSSIQQKIKQQQSKINEQRQKRSVLQSTLKTQEIEMGKVLGKLKETEMSLTET
RQAIKRTEQEIQRLEKQEKEQKEKLKEQLDSAYRSGIHPSVLERLMSESAKNADRMTAYYAHINQVRIDTINDLRRTQQE
LKDRRDELKGQQKGQQTQLSEQKKQEKDLKKVQNERETTLRSINKTLEQDESRLESLKSNEAALRNQLAKATAESERQEE
QEIAKLEQKKNSEEKRKATEQEKQQVRAGRGLGSPKKQFSMPVAGKVVNSFGSRQMGEVTWHGVVIAASAGASVRAIAGG
RVILADWLQGYGQVVVIDHGNGDMSLYGYNQSVSVRKGSRVSAGQQIASVGNSGGQNRSALYFEIRRKGNPKNPMGWVK

Sequences:

>Translated_399_residues
MKVFRPFYVIPLLICFSVFVQSSYATELSSIQQKIKQQQSKINEQRQKRSVLQSTLKTQEIEMGKVLGKLKETEMSLTET
RQAIKRTEQEIQRLEKQEKEQKEKLKEQLDSAYRSGIHPSVLERLMSESAKNADRMTAYYAHINQVRIDTINDLRRTQQE
LKDRRDELKGQQKGQQTQLSEQKKQEKDLKKVQNERETTLRSINKTLEQDESRLESLKSNEAALRNQLAKATAESERQEE
QEIAKLEQKKNSEEKRKATEQEKQQVRAGRGLGSPKKQFSMPVAGKVVNSFGSRQMGEVTWHGVVIAASAGASVRAIAGG
RVILADWLQGYGQVVVIDHGNGDMSLYGYNQSVSVRKGSRVSAGQQIASVGNSGGQNRSALYFEIRRKGNPKNPMGWVK
>Mature_399_residues
MKVFRPFYVIPLLICFSVFVQSSYATELSSIQQKIKQQQSKINEQRQKRSVLQSTLKTQEIEMGKVLGKLKETEMSLTET
RQAIKRTEQEIQRLEKQEKEQKEKLKEQLDSAYRSGIHPSVLERLMSESAKNADRMTAYYAHINQVRIDTINDLRRTQQE
LKDRRDELKGQQKGQQTQLSEQKKQEKDLKKVQNERETTLRSINKTLEQDESRLESLKSNEAALRNQLAKATAESERQEE
QEIAKLEQKKNSEEKRKATEQEKQQVRAGRGLGSPKKQFSMPVAGKVVNSFGSRQMGEVTWHGVVIAASAGASVRAIAGG
RVILADWLQGYGQVVVIDHGNGDMSLYGYNQSVSVRKGSRVSAGQQIASVGNSGGQNRSALYFEIRRKGNPKNPMGWVK

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibP [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=409, Percent_Identity=40.0977995110024, Blast_Score=274, Evalue=8e-75,
Organism=Escherichia coli, GI1789099, Length=115, Percent_Identity=40, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 45299; Mature: 45299

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKVFRPFYVIPLLICFSVFVQSSYATELSSIQQKIKQQQSKINEQRQKRSVLQSTLKTQE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEMGKVLGKLKETEMSLTETRQAIKRTEQEIQRLEKQEKEQKEKLKEQLDSAYRSGIHPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VLERLMSESAKNADRMTAYYAHINQVRIDTINDLRRTQQELKDRRDELKGQQKGQQTQLS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
EQKKQEKDLKKVQNERETTLRSINKTLEQDESRLESLKSNEAALRNQLAKATAESERQEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEIAKLEQKKNSEEKRKATEQEKQQVRAGRGLGSPKKQFSMPVAGKVVNSFGSRQMGEVT
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCCCCCEE
WHGVVIAASAGASVRAIAGGRVILADWLQGYGQVVVIDHGNGDMSLYGYNQSVSVRKGSR
ECCEEEEECCCCCEEEECCCCHHHHHHHHCCCCEEEEECCCCCEEEEECCCCEECCCCCC
VSAGQQIASVGNSGGQNRSALYFEIRRKGNPKNPMGWVK
CHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]