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The map label for this gene is ycaO [C]

Identifier: 126208287

GI number: 126208287

Start: 934070

End: 935833

Strand: Direct

Name: ycaO [C]

Synonym: APL_0811

Alternate gene names: 126208287

Gene position: 934070-935833 (Clockwise)

Preceding gene: 126208283

Following gene: 126208290

Centisome position: 41.07

GC content: 40.59

Gene sequence:

>1764_bases
ATGTCAGAACAAACTTTTATTACCGGTAAAGATGCTGCGCTTGAGGACAGTATTTCTACCTTTCAACATAAATTAAAAAC
TTTAGGCTTTAACATTGAAGAAGCGTCTTGGTTAAATCCTGTACCGAATGTGTGGTCGGTGCATATTCGTGATGCGGATT
GTCCGCAATGTTTCTCGAATGGTAAAGGCGCAAGCAAAAAAGCGGCGTTAGCTTCGGCATTAGGTGAATATTTCGAGCGT
TTATCAACCAACTATTTCTGGGCGGATTTTTATTTAGGTCAAGAAATTGCGAATAGTGAATTTGTGCATTATCCATCAGA
AAAATGGTTTCCAATTGAAGATGACGTATTACCGCCAGCAGATATGATGGACGATTATTTATGGGAATACTTCGATCCGA
ACGGCGAGCTTACGCCGGAATTATTGGTCGATCTCCAATCCGGTAACTACGATCGTGGGATTGTAACCTTACCTTATGTA
CGTCAATCGGATAACCAAACCGTGTATATTCCGCAAAGCATTATCGGCAACTTATTTGTTTCAAACGGTATGTCGGCTGG
TAATACGAAAAACGAAGCGCGTGTACAAGGTTTGTCGGAAGTGTTCGAACGTTTTGTGAAAAACCGTATTATTACTGAAG
CAATCAGCTTACCGGAAATTCCGCAAAGCGTGATTGACGGCTATCCGACAATCAAAGCGTCTATCGAAAAACTTGAGCAA
GAAGGCTTCCCGATTTTATGCTATGACGCATCATTAGGCGGTGAATTCCCGGTTATTTGTGTGATCTTGTTAAATCCGAA
TAATGGTACTTGTTTCGCTTCATTCGGTGCACACCCGAATTTCCAAGTGGCGTTTGAACGTACGGTAACCGAGTTATTAC
AAGGTCGTAGCTTAAAAGATTTAGATGTATTTGCTCCGCCTTCATTTAATAATGAAGATGTGGCGGATCACGCTAACCTT
GAAACGCACTTTATTGATTCAAGCGGTCTGATTTCGTGGGATCTTTTCAAGAAAGATGCCGATTATGAATTCGTTCATTG
GGATTTCTCAGGTACAACCGAGCAAGAGTTTGCCAATATGATGGCAATCTTTAATAAACATGAGCAACCGGTTTATATTA
TGGATTATGAGCATTTAGGTGTGTACGCTTGCCGTATTCTTGCACCGGGTATGTCGAACATTTATCCAAGCGACGATTTA
ATTTATGCGAATAACAATATGGGTATGGATTGGCGTGAAATCTTATTAGATCTGCCACATTTCCATCACGATCGTGAAAC
TTATCAAGAACTTCTTGATGAATTAGATGAACAAGGTATTGATGATTTAACCCGTGTGCGTGAATTTATCGGTTTAGTGG
CGGAAAAAGGTTCTGCAATGCAAACTTTACGTATCGGTGAGCTTAAATCGATGCTACATTTAGCTTTAGGCAACTTAGAG
CAAGCGTTAGATTGGGCAAACTGGACTGCAAATATGAATGCGAGCGTATTCTCAGCAGAACGTAACAATTATTACCGCTG
CTTAATTCAATTGATTGAATTATTCTTAGACAAAGAACGTGATGCGGAACAATATCGTATGGTATTTGAGAAAATGTATG
GTAAACAAGCGGTTGAATCTGCTTGGGGCGCAATCCAAGGCGGTAACCCGTTCCACGGTTTAACCGCATCGGATGAATCA
CTCGAAAATATGACCGCACATCAGAAATTACTTGATGCTTACCGTAAATTACAGGTAGCGAAAGTAAATCCGATTGCTAG
TTAA

Upstream 100 bases:

>100_bases
ATTAAAAAACTCATCCGGTGAATTTCACAAAAAATTTACTTATCTGTAGTGATTTTTGCTAGAATGTCGCACTTTTTTAC
GACAAGTCGAAGGTATTACA

Downstream 100 bases:

>100_bases
GCTTTTCAAATGGTGGGCGAAAGCCCACCTTATTATCTACTATATCTTCCTGAAATCTCTCGCACACTTTCCACTACTTC
ATATTTCAAATCATTAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 586

Protein sequence:

>587_residues
MSEQTFITGKDAALEDSISTFQHKLKTLGFNIEEASWLNPVPNVWSVHIRDADCPQCFSNGKGASKKAALASALGEYFER
LSTNYFWADFYLGQEIANSEFVHYPSEKWFPIEDDVLPPADMMDDYLWEYFDPNGELTPELLVDLQSGNYDRGIVTLPYV
RQSDNQTVYIPQSIIGNLFVSNGMSAGNTKNEARVQGLSEVFERFVKNRIITEAISLPEIPQSVIDGYPTIKASIEKLEQ
EGFPILCYDASLGGEFPVICVILLNPNNGTCFASFGAHPNFQVAFERTVTELLQGRSLKDLDVFAPPSFNNEDVADHANL
ETHFIDSSGLISWDLFKKDADYEFVHWDFSGTTEQEFANMMAIFNKHEQPVYIMDYEHLGVYACRILAPGMSNIYPSDDL
IYANNNMGMDWREILLDLPHFHHDRETYQELLDELDEQGIDDLTRVREFIGLVAEKGSAMQTLRIGELKSMLHLALGNLE
QALDWANWTANMNASVFSAERNNYYRCLIQLIELFLDKERDAEQYRMVFEKMYGKQAVESAWGAIQGGNPFHGLTASDES
LENMTAHQKLLDAYRKLQVAKVNPIAS

Sequences:

>Translated_587_residues
MSEQTFITGKDAALEDSISTFQHKLKTLGFNIEEASWLNPVPNVWSVHIRDADCPQCFSNGKGASKKAALASALGEYFER
LSTNYFWADFYLGQEIANSEFVHYPSEKWFPIEDDVLPPADMMDDYLWEYFDPNGELTPELLVDLQSGNYDRGIVTLPYV
RQSDNQTVYIPQSIIGNLFVSNGMSAGNTKNEARVQGLSEVFERFVKNRIITEAISLPEIPQSVIDGYPTIKASIEKLEQ
EGFPILCYDASLGGEFPVICVILLNPNNGTCFASFGAHPNFQVAFERTVTELLQGRSLKDLDVFAPPSFNNEDVADHANL
ETHFIDSSGLISWDLFKKDADYEFVHWDFSGTTEQEFANMMAIFNKHEQPVYIMDYEHLGVYACRILAPGMSNIYPSDDL
IYANNNMGMDWREILLDLPHFHHDRETYQELLDELDEQGIDDLTRVREFIGLVAEKGSAMQTLRIGELKSMLHLALGNLE
QALDWANWTANMNASVFSAERNNYYRCLIQLIELFLDKERDAEQYRMVFEKMYGKQAVESAWGAIQGGNPFHGLTASDES
LENMTAHQKLLDAYRKLQVAKVNPIAS
>Mature_586_residues
SEQTFITGKDAALEDSISTFQHKLKTLGFNIEEASWLNPVPNVWSVHIRDADCPQCFSNGKGASKKAALASALGEYFERL
STNYFWADFYLGQEIANSEFVHYPSEKWFPIEDDVLPPADMMDDYLWEYFDPNGELTPELLVDLQSGNYDRGIVTLPYVR
QSDNQTVYIPQSIIGNLFVSNGMSAGNTKNEARVQGLSEVFERFVKNRIITEAISLPEIPQSVIDGYPTIKASIEKLEQE
GFPILCYDASLGGEFPVICVILLNPNNGTCFASFGAHPNFQVAFERTVTELLQGRSLKDLDVFAPPSFNNEDVADHANLE
THFIDSSGLISWDLFKKDADYEFVHWDFSGTTEQEFANMMAIFNKHEQPVYIMDYEHLGVYACRILAPGMSNIYPSDDLI
YANNNMGMDWREILLDLPHFHHDRETYQELLDELDEQGIDDLTRVREFIGLVAEKGSAMQTLRIGELKSMLHLALGNLEQ
ALDWANWTANMNASVFSAERNNYYRCLIQLIELFLDKERDAEQYRMVFEKMYGKQAVESAWGAIQGGNPFHGLTASDESL
ENMTAHQKLLDAYRKLQVAKVNPIAS

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=579, Percent_Identity=66.839378238342, Blast_Score=793, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 66549; Mature: 66418

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQTFITGKDAALEDSISTFQHKLKTLGFNIEEASWLNPVPNVWSVHIRDADCPQCFSN
CCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHC
GKGASKKAALASALGEYFERLSTNYFWADFYLGQEIANSEFVHYPSEKWFPIEDDVLPPA
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCEEECCCCCCCCCCCCCCCCH
DMMDDYLWEYFDPNGELTPELLVDLQSGNYDRGIVTLPYVRQSDNQTVYIPQSIIGNLFV
HHHHHHHHHHCCCCCCCCHHHEEEECCCCCCCCEEEECEEECCCCCEEEECHHHHHHHHH
SNGMSAGNTKNEARVQGLSEVFERFVKNRIITEAISLPEIPQSVIDGYPTIKASIEKLEQ
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHH
EGFPILCYDASLGGEFPVICVILLNPNNGTCFASFGAHPNFQVAFERTVTELLQGRSLKD
CCCCEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCCC
LDVFAPPSFNNEDVADHANLETHFIDSSGLISWDLFKKDADYEFVHWDFSGTTEQEFANM
CEEECCCCCCCCCCHHCCCCEEEEECCCCCEEEEHHCCCCCCEEEEEECCCCCHHHHHHH
MAIFNKHEQPVYIMDYEHLGVYACRILAPGMSNIYPSDDLIYANNNMGMDWREILLDLPH
HHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCC
FHHDRETYQELLDELDEQGIDDLTRVREFIGLVAEKGSAMQTLRIGELKSMLHLALGNLE
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QALDWANWTANMNASVFSAERNNYYRCLIQLIELFLDKERDAEQYRMVFEKMYGKQAVES
HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AWGAIQGGNPFHGLTASDESLENMTAHQKLLDAYRKLQVAKVNPIAS
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
>Mature Secondary Structure 
SEQTFITGKDAALEDSISTFQHKLKTLGFNIEEASWLNPVPNVWSVHIRDADCPQCFSN
CCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHC
GKGASKKAALASALGEYFERLSTNYFWADFYLGQEIANSEFVHYPSEKWFPIEDDVLPPA
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCEEECCCCCCCCCCCCCCCCH
DMMDDYLWEYFDPNGELTPELLVDLQSGNYDRGIVTLPYVRQSDNQTVYIPQSIIGNLFV
HHHHHHHHHHCCCCCCCCHHHEEEECCCCCCCCEEEECEEECCCCCEEEECHHHHHHHHH
SNGMSAGNTKNEARVQGLSEVFERFVKNRIITEAISLPEIPQSVIDGYPTIKASIEKLEQ
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHH
EGFPILCYDASLGGEFPVICVILLNPNNGTCFASFGAHPNFQVAFERTVTELLQGRSLKD
CCCCEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCCC
LDVFAPPSFNNEDVADHANLETHFIDSSGLISWDLFKKDADYEFVHWDFSGTTEQEFANM
CEEECCCCCCCCCCHHCCCCEEEEECCCCCEEEEHHCCCCCCEEEEEECCCCCHHHHHHH
MAIFNKHEQPVYIMDYEHLGVYACRILAPGMSNIYPSDDLIYANNNMGMDWREILLDLPH
HHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCC
FHHDRETYQELLDELDEQGIDDLTRVREFIGLVAEKGSAMQTLRIGELKSMLHLALGNLE
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QALDWANWTANMNASVFSAERNNYYRCLIQLIELFLDKERDAEQYRMVFEKMYGKQAVES
HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AWGAIQGGNPFHGLTASDESLENMTAHQKLLDAYRKLQVAKVNPIAS
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]