| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208264
Identifier: 126208264
GI number: 126208264
Start: 906716
End: 907804
Strand: Reverse
Name: 126208264
Synonym: APL_0786
Alternate gene names: NA
Gene position: 907804-906716 (Counterclockwise)
Preceding gene: 126208265
Following gene: 126208263
Centisome position: 39.91
GC content: 29.02
Gene sequence:
>1089_bases ATGAAGGAAACAAAGAATTCTGCATTAATAACAGCACAAGCTTTTTACTATCAGAGTATTGTTGCATTGGAAAAATGTTT TGAGATGGAAGAAGGAGATATAATTTATCTTGAACAAGATGGTGATGTTAGCCACCGTTCGAATAATTTAGATATAAGTT CTCAAAGCGAAGTAAAAGATGTTCAAACACCATTAACCGATCATAGTAAAACTTTTTGGAACACACTTAACAACTGGTTA GCTCCTGAATTTAACCATTCACAATATAAGTATTTAATCTTATATACCACACAATCCTTTGGTAAAACTGCGCAATTAGC TACTTGGAATGATAGAAATCCACAAGAGAAATTTCAAATCCTGACGGATATTTATTCAAGCTCCACTTCTGAATCTAAAA TTGCAAAAATGCAAAAGGATATTCTCAATATGGATCATGATTCATTGATAGTAGTTATTGAAAAAATTGTATTAATTACT GAAGCAGATAATAAAGATGAAATTTTAAGTAAAATTAAAAGAACTAAATTATTTGGAATACCAGAGAATAATCAACAAGT TTTTATAGAAAATTTAATTGGCTTTATTTATGAATTAGGAAATGAAATGACTTGGTGTATTCGTTATGATCAGTTTCAAG AAAAGTTCATTGATTTAACTAGCCAATATTCAAGAAAAGAATTTACTTTCCCAGAATTTAGAGGTATGGATGCGACAGTA CAAGAAATTGCTGAAAATGAAGATAAACAATTTGTTAGAAAAATAAAAGATATTGAGTATGAAGATGTTATTTCAGAAGC AATTGGAAACTGGTTAGAGTTCGAAAGATCTTTAATGCAAGATTTAGATTATAGCCCCGTTTATCTAGAAAAAACACAAA AATATCAAGTTGAATTGATTAATAAATATAAAGGAAAATATAGAACAGCTCAAAGAAACAAAAAAGATCCTAAGGATATG TATGATGAAATTATTTATTCAGAACCTATGTTAATAGGAAATATTAGACCTCACTTAGCTTACCGAAATGGAGTTATACA TGATGCAATGGATACGAATCCTGAACTAACATGGGATACAAGAAAATGA
Upstream 100 bases:
>100_bases TTATAGAAATTATAGATATCTTGCTAATTTCTAAAATTTATCAATAATGCATTGTTAATGTTAGCTTATGTTGAACGCTA GTAAGCAATGGAGAAAAGTA
Downstream 100 bases:
>100_bases ATACTATAGATGCTTTATATACAATTAAATATAATCCATTCAAATATAGTAAATATCTTGTTACCTTTTATTCTGAATTA ACAGGTGTTGAGCAAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MKETKNSALITAQAFYYQSIVALEKCFEMEEGDIIYLEQDGDVSHRSNNLDISSQSEVKDVQTPLTDHSKTFWNTLNNWL APEFNHSQYKYLILYTTQSFGKTAQLATWNDRNPQEKFQILTDIYSSSTSESKIAKMQKDILNMDHDSLIVVIEKIVLIT EADNKDEILSKIKRTKLFGIPENNQQVFIENLIGFIYELGNEMTWCIRYDQFQEKFIDLTSQYSRKEFTFPEFRGMDATV QEIAENEDKQFVRKIKDIEYEDVISEAIGNWLEFERSLMQDLDYSPVYLEKTQKYQVELINKYKGKYRTAQRNKKDPKDM YDEIIYSEPMLIGNIRPHLAYRNGVIHDAMDTNPELTWDTRK
Sequences:
>Translated_362_residues MKETKNSALITAQAFYYQSIVALEKCFEMEEGDIIYLEQDGDVSHRSNNLDISSQSEVKDVQTPLTDHSKTFWNTLNNWL APEFNHSQYKYLILYTTQSFGKTAQLATWNDRNPQEKFQILTDIYSSSTSESKIAKMQKDILNMDHDSLIVVIEKIVLIT EADNKDEILSKIKRTKLFGIPENNQQVFIENLIGFIYELGNEMTWCIRYDQFQEKFIDLTSQYSRKEFTFPEFRGMDATV QEIAENEDKQFVRKIKDIEYEDVISEAIGNWLEFERSLMQDLDYSPVYLEKTQKYQVELINKYKGKYRTAQRNKKDPKDM YDEIIYSEPMLIGNIRPHLAYRNGVIHDAMDTNPELTWDTRK >Mature_362_residues MKETKNSALITAQAFYYQSIVALEKCFEMEEGDIIYLEQDGDVSHRSNNLDISSQSEVKDVQTPLTDHSKTFWNTLNNWL APEFNHSQYKYLILYTTQSFGKTAQLATWNDRNPQEKFQILTDIYSSSTSESKIAKMQKDILNMDHDSLIVVIEKIVLIT EADNKDEILSKIKRTKLFGIPENNQQVFIENLIGFIYELGNEMTWCIRYDQFQEKFIDLTSQYSRKEFTFPEFRGMDATV QEIAENEDKQFVRKIKDIEYEDVISEAIGNWLEFERSLMQDLDYSPVYLEKTQKYQVELINKYKGKYRTAQRNKKDPKDM YDEIIYSEPMLIGNIRPHLAYRNGVIHDAMDTNPELTWDTRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42676; Mature: 42676
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETKNSALITAQAFYYQSIVALEKCFEMEEGDIIYLEQDGDVSHRSNNLDISSQSEVKD CCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHH VQTPLTDHSKTFWNTLNNWLAPEFNHSQYKYLILYTTQSFGKTAQLATWNDRNPQEKFQI HHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCHHHHHHH LTDIYSSSTSESKIAKMQKDILNMDHDSLIVVIEKIVLITEADNKDEILSKIKRTKLFGI HHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHEECC PENNQQVFIENLIGFIYELGNEMTWCIRYDQFQEKFIDLTSQYSRKEFTFPEFRGMDATV CCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHH QEIAENEDKQFVRKIKDIEYEDVISEAIGNWLEFERSLMQDLDYSPVYLEKTQKYQVELI HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHH NKYKGKYRTAQRNKKDPKDMYDEIIYSEPMLIGNIRPHLAYRNGVIHDAMDTNPELTWDT HHHCCHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCHHHHHCCCCEECCCCCCCCEECCC RK CC >Mature Secondary Structure MKETKNSALITAQAFYYQSIVALEKCFEMEEGDIIYLEQDGDVSHRSNNLDISSQSEVKD CCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHH VQTPLTDHSKTFWNTLNNWLAPEFNHSQYKYLILYTTQSFGKTAQLATWNDRNPQEKFQI HHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCHHHHHHH LTDIYSSSTSESKIAKMQKDILNMDHDSLIVVIEKIVLITEADNKDEILSKIKRTKLFGI HHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHEECC PENNQQVFIENLIGFIYELGNEMTWCIRYDQFQEKFIDLTSQYSRKEFTFPEFRGMDATV CCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHH QEIAENEDKQFVRKIKDIEYEDVISEAIGNWLEFERSLMQDLDYSPVYLEKTQKYQVELI HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHH NKYKGKYRTAQRNKKDPKDMYDEIIYSEPMLIGNIRPHLAYRNGVIHDAMDTNPELTWDT HHHCCHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCHHHHHCCCCEECCCCCCCCEECCC RK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA