Click here to switch to the map view.

The map label for this gene is yhdL [C]

Identifier: 126208239

GI number: 126208239

Start: 870918

End: 871160

Strand: Reverse

Name: yhdL [C]

Synonym: APL_0761

Alternate gene names: 126208239

Gene position: 871160-870918 (Counterclockwise)

Preceding gene: 126208244

Following gene: 126208230

Centisome position: 38.3

GC content: 38.68

Gene sequence:

>243_bases
ATGAAACAAGCACAAAATACGGTTTATGAGCACCAAAGAGGCGAGATCCGAGAAAGTGCGATAAAAGCACTTGTAACGGA
TAAATTGTTTCGTACTCGGATTGAGAACAATCGAAAAGGCAAAGGGAGTTATCAACGAAACGCAAAACACCGTAAAGCGG
GTTATGAGAGAAGCGAAAGCCCATTTAAAAATGTTCCGACGAGCAATTTTAAATGGGCTTTTTTATTAGCATTCAGTAAT
TAA

Upstream 100 bases:

>100_bases
TACAGAAAATTTCAGTTTTCTTATATACAAAGAGCGTAAATTTCGGCATTATGCATACTACGATTCACATATTTTGTACA
GTTAAAATAGAGGAACTAAA

Downstream 100 bases:

>100_bases
TTTGGCATAAAAAAATCCCTTGTCTTTCGACAAGGGATTGGAATTTTATGGTGCGACTAGCTGGACTCGAACCAGTGACC
CCCACCATGTCAAGGTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKQAQNTVYEHQRGEIRESAIKALVTDKLFRTRIENNRKGKGSYQRNAKHRKAGYERSESPFKNVPTSNFKWAFLLAFSN

Sequences:

>Translated_80_residues
MKQAQNTVYEHQRGEIRESAIKALVTDKLFRTRIENNRKGKGSYQRNAKHRKAGYERSESPFKNVPTSNFKWAFLLAFSN
>Mature_80_residues
MKQAQNTVYEHQRGEIRESAIKALVTDKLFRTRIENNRKGKGSYQRNAKHRKAGYERSESPFKNVPTSNFKWAFLLAFSN

Specific function: Unknown

COG id: COG3036

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhdL [H]

Homologues:

Organism=Escherichia coli, GI87082241, Length=46, Percent_Identity=54.3478260869565, Blast_Score=58, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005589 [H]

Pfam domain/function: PF03889 DUF331 [H]

EC number: NA

Molecular weight: Translated: 9376; Mature: 9376

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQAQNTVYEHQRGEIRESAIKALVTDKLFRTRIENNRKGKGSYQRNAKHRKAGYERSES
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHCCCCCCCC
PFKNVPTSNFKWAFLLAFSN
CCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKQAQNTVYEHQRGEIRESAIKALVTDKLFRTRIENNRKGKGSYQRNAKHRKAGYERSES
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHCCCCCCCC
PFKNVPTSNFKWAFLLAFSN
CCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]