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The map label for this gene is yciM [C]

Identifier: 126208217

GI number: 126208217

Start: 842999

End: 844195

Strand: Reverse

Name: yciM [C]

Synonym: APL_0737

Alternate gene names: 126208217

Gene position: 844195-842999 (Counterclockwise)

Preceding gene: 126208218

Following gene: 126208216

Centisome position: 37.12

GC content: 38.26

Gene sequence:

>1197_bases
ATGCTAGAATTACTGTTCCTTTTGTTACCTATAGCTGCGCTTTACGGCTGGTATATGGGGCAACGCAGTGCAAAGAAGGA
TCAAGAAACTGTTAATAATAAGTTTTCCCGTGATTATGTGACGGGGCTTAATTTTCTTTTATCTAATCAACAGGAAAAGG
CGGTCGATCTTTTCCTTTCCATGCTTCAGAAACAAGAAGCCGAAAATCAGATTGCAACGGAATCACAATTTGAAGCGGAA
TTAACGCTCGGTAATCTTTTCCGCTCGCGTGGTGAAGTGGATCGCGCCTTACGTATTCATCAAGCTTTAGATGCCAGCCC
GGATTATTCCATCGAACAGAAATTATTAGCGAAACAACAATTAGCGAAAGATTTTATGGCGGCGGGTTTTTATGATAGAG
CTGAAAATTATTATATTATGTTGCTCGATGAGCCGGAGTTTGCGGTAAATTCACTAACTCAATTGATGACGGTTTATCAG
AAAACCAAGGAATGGAAGAAAGCGATTAATGTTGCGGAAAAGCTCATTAAAATAGAGCCGGATACGGATAAAATCCCGCT
TTCTCATTATTATTGCGAATATGCTCAGGCGATAAAAAATGAAGATTTAGACGGACATTTGAGCGCATTATCCAAAGCCT
TGGAATATTCTCCGCAATGTGCCAGAGCCTCGATCTTATTAGGCGATTATTATTTAGCACAAAATCAATTTCAAAGCGCA
TTAAAAAATTACGAGCGTATTTTGCAGCAAGATCCGGATTTTATTAGTGAAGTGATAGAGAAAATAAAAGCCTGTTATAT
GGCAGAAAACGATTTGGCGAATTACGAGTTGTTTTTAATTAGAGCAAATCAGATTAAGCATAATAGTAGCGTGGATCTCG
CTTTAGCGGAATATATTGAGCAAAAAGATGGCGTGGTAGCCGCACATTCCAAGTTATATCAACAGTTAAGCCAATATCCG
AGTATGATTACGTTCCATCGTTTCATTCATTATCAAATTAATGAAGCGGAGGAGGGTAGAGCAAAAGAAAGTTTGATGTT
GTTATATAATATGGTCGGTTCAAGAATGAAAAAAGGCTTTCAGTATCGATGTTTAAACTGCGGTTACCAAAGTTATCGAT
TAAGTTGGCATTGTCCGTCTTGTCGCCGATGGGAACAAATTAAACCTATACACAGCATTGATTCACAAATTAATTGA

Upstream 100 bases:

>100_bases
ATTTACGTATTAAATTGCAAAATATTACGCTTAATCGTCGCGTTAGACGTCAGGCACAACAAATTACTGAATTAACAACA
ACTACGCCGAAGGCTGAGTA

Downstream 100 bases:

>100_bases
ATAAACTAAAATTGAGGAGTCCTTATGGATAATAAAATTATTGTTGCTTTAGACTATGAAACAGAATATGAAGCATTGAG
TTTTGTAGATCAAGTTGATC

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLELLFLLLPIAALYGWYMGQRSAKKDQETVNNKFSRDYVTGLNFLLSNQQEKAVDLFLSMLQKQEAENQIATESQFEAE
LTLGNLFRSRGEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVNSLTQLMTVYQ
KTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSALSKALEYSPQCARASILLGDYYLAQNQFQSA
LKNYERILQQDPDFISEVIEKIKACYMAENDLANYELFLIRANQIKHNSSVDLALAEYIEQKDGVVAAHSKLYQQLSQYP
SMITFHRFIHYQINEAEEGRAKESLMLLYNMVGSRMKKGFQYRCLNCGYQSYRLSWHCPSCRRWEQIKPIHSIDSQIN

Sequences:

>Translated_398_residues
MLELLFLLLPIAALYGWYMGQRSAKKDQETVNNKFSRDYVTGLNFLLSNQQEKAVDLFLSMLQKQEAENQIATESQFEAE
LTLGNLFRSRGEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVNSLTQLMTVYQ
KTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSALSKALEYSPQCARASILLGDYYLAQNQFQSA
LKNYERILQQDPDFISEVIEKIKACYMAENDLANYELFLIRANQIKHNSSVDLALAEYIEQKDGVVAAHSKLYQQLSQYP
SMITFHRFIHYQINEAEEGRAKESLMLLYNMVGSRMKKGFQYRCLNCGYQSYRLSWHCPSCRRWEQIKPIHSIDSQIN
>Mature_398_residues
MLELLFLLLPIAALYGWYMGQRSAKKDQETVNNKFSRDYVTGLNFLLSNQQEKAVDLFLSMLQKQEAENQIATESQFEAE
LTLGNLFRSRGEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVNSLTQLMTVYQ
KTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSALSKALEYSPQCARASILLGDYYLAQNQFQSA
LKNYERILQQDPDFISEVIEKIKACYMAENDLANYELFLIRANQIKHNSSVDLALAEYIEQKDGVVAAHSKLYQQLSQYP
SMITFHRFIHYQINEAEEGRAKESLMLLYNMVGSRMKKGFQYRCLNCGYQSYRLSWHCPSCRRWEQIKPIHSIDSQIN

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=387, Percent_Identity=47.2868217054264, Blast_Score=394, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46194; Mature: 46194

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELLFLLLPIAALYGWYMGQRSAKKDQETVNNKFSRDYVTGLNFLLSNQQEKAVDLFLS
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MLQKQEAENQIATESQFEAELTLGNLFRSRGEVDRALRIHQALDASPDYSIEQKLLAKQQ
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LAKDFMAAGFYDRAENYYIMLLDEPEFAVNSLTQLMTVYQKTKEWKKAINVAEKLIKIEP
HHHHHHHHCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTDKIPLSHYYCEYAQAIKNEDLDGHLSALSKALEYSPQCARASILLGDYYLAQNQFQSA
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LKNYERILQQDPDFISEVIEKIKACYMAENDLANYELFLIRANQIKHNSSVDLALAEYIE
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHH
QKDGVVAAHSKLYQQLSQYPSMITFHRFIHYQINEAEEGRAKESLMLLYNMVGSRMKKGF
HCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
QYRCLNCGYQSYRLSWHCPSCRRWEQIKPIHSIDSQIN
CCHHHHCCCHHEEEEECCCCCCCHHHCCCHHHHCCCCC
>Mature Secondary Structure
MLELLFLLLPIAALYGWYMGQRSAKKDQETVNNKFSRDYVTGLNFLLSNQQEKAVDLFLS
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MLQKQEAENQIATESQFEAELTLGNLFRSRGEVDRALRIHQALDASPDYSIEQKLLAKQQ
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LAKDFMAAGFYDRAENYYIMLLDEPEFAVNSLTQLMTVYQKTKEWKKAINVAEKLIKIEP
HHHHHHHHCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTDKIPLSHYYCEYAQAIKNEDLDGHLSALSKALEYSPQCARASILLGDYYLAQNQFQSA
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LKNYERILQQDPDFISEVIEKIKACYMAENDLANYELFLIRANQIKHNSSVDLALAEYIE
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHH
QKDGVVAAHSKLYQQLSQYPSMITFHRFIHYQINEAEEGRAKESLMLLYNMVGSRMKKGF
HCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
QYRCLNCGYQSYRLSWHCPSCRRWEQIKPIHSIDSQIN
CCHHHHCCCHHEEEEECCCCCCCHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]