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The map label for this gene is ygiM [C]

Identifier: 126208200

GI number: 126208200

Start: 830104

End: 830709

Strand: Direct

Name: ygiM [C]

Synonym: APL_0720

Alternate gene names: 126208200

Gene position: 830104-830709 (Clockwise)

Preceding gene: 126208199

Following gene: 126208204

Centisome position: 36.5

GC content: 40.92

Gene sequence:

>606_bases
ATGTTAAAACGGAAGTTAATCCTAATTGCTTATACCTTACTTGGTCTTTCTTCTCCGGTATTTTCCGCAGATTATATTAC
GGAGAATCTCAGTACTTATATGCGAAAAGGTGCGGGTGATCAATACAAAATTTCAGGTGCTGTTCAAGCCGGTGAAAAAG
TAACGGTATTAGACCGGAAAGATCGCTTTGTTTTAATTCGTGATAGCAGAAATCGAGAGGGATGGGTGCTTGCCTCTGAA
ATTTCTCAGACTGCAAGCCCGAAAGATTTAATTCCTCAACTGCAACAGCAAGTACAGGATTTAAGTAGTAAATTAGGTAA
GATTGATGCGGATTGGCAACAACGTACGTTAGAAATGCAACGCCGCAGCCAACAAGCCGAACAGCAAAGTAGCCAACTTC
TCGATCAAAATGCTCAATTGAAGCGAGAGTTGGATATTCTGAAAAACAAGAATCGAGATTTGGAAACGATGCATGACTCT
GCCAAACGAGAAATTGTGATTCAGTGGTTTATCTATGGCGGTTCGGTACTTGCGGTAGGTTTATTACTCGGATTAATTAT
TCCGTTTATCTTACCGCGTCGTAAACGTCATAACGGTTGGTCATAG

Upstream 100 bases:

>100_bases
TGTTATCTATGAAATCTTATTAATGATTTTTTATTAATTTTATCGTTCGGGGAAAGTATGTTTAAACATATCTTTCCCTT
TCATTTAAAAGGACTCGATT

Downstream 100 bases:

>100_bases
GCTTCTATCAATTAAGCGGTTATTTTTGCAAAAAAGTTTGTAAAAACAACCGCTTACTTTTTGCGAATACTCAAGGAATG
ATACCGGCTGATTTGCGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MLKRKLILIAYTLLGLSSPVFSADYITENLSTYMRKGAGDQYKISGAVQAGEKVTVLDRKDRFVLIRDSRNREGWVLASE
ISQTASPKDLIPQLQQQVQDLSSKLGKIDADWQQRTLEMQRRSQQAEQQSSQLLDQNAQLKRELDILKNKNRDLETMHDS
AKREIVIQWFIYGGSVLAVGLLLGLIIPFILPRRKRHNGWS

Sequences:

>Translated_201_residues
MLKRKLILIAYTLLGLSSPVFSADYITENLSTYMRKGAGDQYKISGAVQAGEKVTVLDRKDRFVLIRDSRNREGWVLASE
ISQTASPKDLIPQLQQQVQDLSSKLGKIDADWQQRTLEMQRRSQQAEQQSSQLLDQNAQLKRELDILKNKNRDLETMHDS
AKREIVIQWFIYGGSVLAVGLLLGLIIPFILPRRKRHNGWS
>Mature_201_residues
MLKRKLILIAYTLLGLSSPVFSADYITENLSTYMRKGAGDQYKISGAVQAGEKVTVLDRKDRFVLIRDSRNREGWVLASE
ISQTASPKDLIPQLQQQVQDLSSKLGKIDADWQQRTLEMQRRSQQAEQQSSQLLDQNAQLKRELDILKNKNRDLETMHDS
AKREIVIQWFIYGGSVLAVGLLLGLIIPFILPRRKRHNGWS

Specific function: Unknown

COG id: COG3103

COG function: function code T; SH3 domain protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygiM [H]

Homologues:

Organism=Escherichia coli, GI1789435, Length=202, Percent_Identity=39.6039603960396, Blast_Score=127, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003646
- InterPro:   IPR013247
- InterPro:   IPR016476 [H]

Pfam domain/function: PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 22993; Mature: 22993

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRKLILIAYTLLGLSSPVFSADYITENLSTYMRKGAGDQYKISGAVQAGEKVTVLDRK
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCEEEEEECC
DRFVLIRDSRNREGWVLASEISQTASPKDLIPQLQQQVQDLSSKLGKIDADWQQRTLEMQ
CCEEEEECCCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RRSQQAEQQSSQLLDQNAQLKRELDILKNKNRDLETMHDSAKREIVIQWFIYGGSVLAVG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEEEECCCHHHHHH
LLLGLIIPFILPRRKRHNGWS
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLKRKLILIAYTLLGLSSPVFSADYITENLSTYMRKGAGDQYKISGAVQAGEKVTVLDRK
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCEEEEEECC
DRFVLIRDSRNREGWVLASEISQTASPKDLIPQLQQQVQDLSSKLGKIDADWQQRTLEMQ
CCEEEEECCCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RRSQQAEQQSSQLLDQNAQLKRELDILKNKNRDLETMHDSAKREIVIQWFIYGGSVLAVG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEEEECCCHHHHHH
LLLGLIIPFILPRRKRHNGWS
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]