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The map label for this gene is yhcH [C]

Identifier: 126208187

GI number: 126208187

Start: 817194

End: 817661

Strand: Reverse

Name: yhcH [C]

Synonym: APL_0707

Alternate gene names: 126208187

Gene position: 817661-817194 (Counterclockwise)

Preceding gene: 126208188

Following gene: 126208186

Centisome position: 35.95

GC content: 38.25

Gene sequence:

>468_bases
ATGTTATTAGGTGATTTATCTCGTGCGGATTATGCGAAATCGTTACCCCCTGTTTTTGCGCGTTTATGTGAAAAACTTAA
AAATTTAGATTTAGTTAATCTTCCCTTAGGTTGGCAGGATCTTGAAGAGGGTGTTCGTATGAACGTGATGGAGTTCGAAA
CCTCGCCGGCGGAAGAGAAAAAAGCCGAAATGCACCGTAAATTTATTGATATTCAATTACTTATCTCAGGGGAAGAAATG
ATTGAATATGGTTTGAGCGAGCCTGATTTAGCACTGTATGACGAATATCGAGATGAAGACGACTATCAACTTACCGATAA
AATCGAACATAAAAACGAGTTGATTTTACAACCGAATATGTTTGCGATCTTTCTTCCTTACGAACCGCATAAACCGGGAA
ATGCGGTAGGCGGACAAAATAAATTACTTAAAAAACTTGTGGTGAAAGTACCTGTGAGTTATCTATAG

Upstream 100 bases:

>100_bases
TTTAACCTACTATTATTGGAGTATATCTTCATTTATGGAGTGTTTGCTGAATTGATACGGCAATCTATGTAATAGTTAAT
TTAAGGTAAGGACTGTTAAT

Downstream 100 bases:

>100_bases
GAGGCGCAAATGTCTGCTCGAGGTAAAATATTAGATACAATCGGTGCGTTACAAACCAGCCTGACCAAAACGGAAAAGAA
AATCGCATCGGCGATTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MLLGDLSRADYAKSLPPVFARLCEKLKNLDLVNLPLGWQDLEEGVRMNVMEFETSPAEEKKAEMHRKFIDIQLLISGEEM
IEYGLSEPDLALYDEYRDEDDYQLTDKIEHKNELILQPNMFAIFLPYEPHKPGNAVGGQNKLLKKLVVKVPVSYL

Sequences:

>Translated_155_residues
MLLGDLSRADYAKSLPPVFARLCEKLKNLDLVNLPLGWQDLEEGVRMNVMEFETSPAEEKKAEMHRKFIDIQLLISGEEM
IEYGLSEPDLALYDEYRDEDDYQLTDKIEHKNELILQPNMFAIFLPYEPHKPGNAVGGQNKLLKKLVVKVPVSYL
>Mature_155_residues
MLLGDLSRADYAKSLPPVFARLCEKLKNLDLVNLPLGWQDLEEGVRMNVMEFETSPAEEKKAEMHRKFIDIQLLISGEEM
IEYGLSEPDLALYDEYRDEDDYQLTDKIEHKNELILQPNMFAIFLPYEPHKPGNAVGGQNKLLKKLVVKVPVSYL

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhcH [H]

Homologues:

Organism=Escherichia coli, GI1789615, Length=93, Percent_Identity=50.5376344086022, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: NA

Molecular weight: Translated: 17853; Mature: 17853

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLGDLSRADYAKSLPPVFARLCEKLKNLDLVNLPLGWQDLEEGVRMNVMEFETSPAEEK
CCCCCCCHHHHHHCCCHHHHHHHHHHHCCCEEECCCCHHHHHCCHHEEEEECCCCCCHHH
KAEMHRKFIDIQLLISGEEMIEYGLSEPDLALYDEYRDEDDYQLTDKIEHKNELILQPNM
HHHHHHHHHEEEEEECCHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHCCCCCEEECCCE
FAIFLPYEPHKPGNAVGGQNKLLKKLVVKVPVSYL
EEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLLGDLSRADYAKSLPPVFARLCEKLKNLDLVNLPLGWQDLEEGVRMNVMEFETSPAEEK
CCCCCCCHHHHHHCCCHHHHHHHHHHHCCCEEECCCCHHHHHCCHHEEEEECCCCCCHHH
KAEMHRKFIDIQLLISGEEMIEYGLSEPDLALYDEYRDEDDYQLTDKIEHKNELILQPNM
HHHHHHHHHEEEEEECCHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHCCCCCEEECCCE
FAIFLPYEPHKPGNAVGGQNKLLKKLVVKVPVSYL
EEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 9719565; 10675023 [H]