| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is yejM [C]
Identifier: 126208065
GI number: 126208065
Start: 663279
End: 665018
Strand: Reverse
Name: yejM [C]
Synonym: APL_0583
Alternate gene names: 126208065
Gene position: 665018-663279 (Counterclockwise)
Preceding gene: 126208066
Following gene: 126208059
Centisome position: 29.24
GC content: 40.34
Gene sequence:
>1740_bases ATGCTAAATCGATTACGCCGACTACTACCGTCAAATTCTCTCCAATACCGTGAAGAAACTTCGCAGCGTATTACTTGGGG ACATTGGTTCGCACTTTTTAATGTGGTGTTGGCGTTATTGATTGCTTCTCGATATGCGTTTAATGCCGACTGGCCTAATA CGCTTTCCGGTAAGCTCTACTTTTTCACCAGTTTATTCGGTCATTTCAGTTTTATTGTTTTTGCCGTTTATCTGTTACTA CTCTTTCCTCTCAGTTTCTTAATTAAAAACGAACGGACTTTCCGCGGACTTTCCGTGATTTTAGCGACTATCGGACAAAC CGTTTTATTGCTGGATACCGAGGTTTTTAAACAATTTTATCTGCACTTATCTCCGCTGGTGTGGGACTTGCTGGTAAACC CCGATCAGGGTGAACTGACTCGCCAATGGCAATTACTTTTTGTTCCTATGCCGCTTATTTTATTGGTGGAGATGCTTTAT TCCCGTTGGTGTTGGCAAAAACTTCGCAGTTTTAACCGTCAAACATGGGGAAAATATGTCGCTTATTTTTTCGTTAGTTG CTTTACCGCAACCCATTTGGTTTATGCTTGGGCGGATATGACGCTTTATCGTCCGATTACCGCACAAAAAGCCAATTATC CGCTTTCTCACCCGATGACGGCTCGAACTTTCTTACAAAAACACGGTTTGATTGATCAAGCGGAATTACAACAAGAAATC GAAGAAAGCGGTCGTTTGGACAGTTTTTATTTAAATTATCCGAAACATACCTTAATTTTCACTCAGAAACCGACGACTAA TCTCTTATTCATTAATTTGTCCGGTTTGAATAACGATGCGATTACCGCCGAATATATGCCGACGCTAACCGAGATCAGCC GAAAATCTCATCGTTTTATGCAACATTATTCGAGCGGAGATTCTGCCGCCGCCGGCGTATTAGGTTTATTTTATAGTTTA AGCGGCAAATATCTGGATGCGGTATTAGGTAATAAAGAAACGTCGCCGTTGTTGCTTGCTTTCAGACAATCCGGTTATCA ATTGGGACTATTTTCTCACAACGGATTTGCCGATCCGATTTACCACCAAGCCGTTTTTGCGGGAATTTTATTATCCGAAT CTCAGAATAATTTAGATGCTATTGCACAATGGAAACAATGGGTTACTCAACGTTCATTAAACGAGCCGTTTTTTAGTTAT TTAGATTTAGCGATGCCTAGTGCAAACGATTATGTTCAACAAACGAAATTACTTGATTGGCAACTCAATGAAATTTGGAC TCAGCTGGAAACCCATGCCTTGCTAGCCAATACGTTAGTGATTCTTACGGCGGATCAAGCGATTCCGTCCGATAAACAAA GTGAAAATAGTTTTGCCAAACAACATATCCAAGTACCGATGATGATGTATTGGCAGGGCGAAGGCAAACAGTATGATTTT CTGTCAAGCCACGTAGATATATTGCCTACGTTACTCAACCAATTCTTTAAAATCAAAAACCCTCTTAGCGATTATGCACA AGGGATTGATTTAACGACGCAAAATAAACGTTTATGGCTATTGGCATCAAATCATAAATGGGATGTAGCTATTATGCCGG ACGGCGAGCAATATCACATTGATAAACGAGGACACTTTGAGAATTTTAATGCGCAAGGCGAAAAAGTAAAAAGTGAACGT CCGCCGCTTGCACTCTTCTTACATATGATCCAACAAAGTAATCAATTTGTTGAGAAATAA
Upstream 100 bases:
>100_bases CGAATATTTTATTAGAAAACGTGCAAACCGGAGCTCAACGTCTTGCGCTTGCCGAAGCATTCTCAAACGCACTTAAAAAT TCACTTAAAATCAAATAACA
Downstream 100 bases:
>100_bases GCGGTAACTGAAAATGGGATAACAATCCCATTTTCTTTTATTGTGCCTAAGCTATTTTATTACACGATAACGTAAAGAAA TAAATACAAACCATAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 579; Mature: 579
Protein sequence:
>579_residues MLNRLRRLLPSNSLQYREETSQRITWGHWFALFNVVLALLIASRYAFNADWPNTLSGKLYFFTSLFGHFSFIVFAVYLLL LFPLSFLIKNERTFRGLSVILATIGQTVLLLDTEVFKQFYLHLSPLVWDLLVNPDQGELTRQWQLLFVPMPLILLVEMLY SRWCWQKLRSFNRQTWGKYVAYFFVSCFTATHLVYAWADMTLYRPITAQKANYPLSHPMTARTFLQKHGLIDQAELQQEI EESGRLDSFYLNYPKHTLIFTQKPTTNLLFINLSGLNNDAITAEYMPTLTEISRKSHRFMQHYSSGDSAAAGVLGLFYSL SGKYLDAVLGNKETSPLLLAFRQSGYQLGLFSHNGFADPIYHQAVFAGILLSESQNNLDAIAQWKQWVTQRSLNEPFFSY LDLAMPSANDYVQQTKLLDWQLNEIWTQLETHALLANTLVILTADQAIPSDKQSENSFAKQHIQVPMMMYWQGEGKQYDF LSSHVDILPTLLNQFFKIKNPLSDYAQGIDLTTQNKRLWLLASNHKWDVAIMPDGEQYHIDKRGHFENFNAQGEKVKSER PPLALFLHMIQQSNQFVEK
Sequences:
>Translated_579_residues MLNRLRRLLPSNSLQYREETSQRITWGHWFALFNVVLALLIASRYAFNADWPNTLSGKLYFFTSLFGHFSFIVFAVYLLL LFPLSFLIKNERTFRGLSVILATIGQTVLLLDTEVFKQFYLHLSPLVWDLLVNPDQGELTRQWQLLFVPMPLILLVEMLY SRWCWQKLRSFNRQTWGKYVAYFFVSCFTATHLVYAWADMTLYRPITAQKANYPLSHPMTARTFLQKHGLIDQAELQQEI EESGRLDSFYLNYPKHTLIFTQKPTTNLLFINLSGLNNDAITAEYMPTLTEISRKSHRFMQHYSSGDSAAAGVLGLFYSL SGKYLDAVLGNKETSPLLLAFRQSGYQLGLFSHNGFADPIYHQAVFAGILLSESQNNLDAIAQWKQWVTQRSLNEPFFSY LDLAMPSANDYVQQTKLLDWQLNEIWTQLETHALLANTLVILTADQAIPSDKQSENSFAKQHIQVPMMMYWQGEGKQYDF LSSHVDILPTLLNQFFKIKNPLSDYAQGIDLTTQNKRLWLLASNHKWDVAIMPDGEQYHIDKRGHFENFNAQGEKVKSER PPLALFLHMIQQSNQFVEK >Mature_579_residues MLNRLRRLLPSNSLQYREETSQRITWGHWFALFNVVLALLIASRYAFNADWPNTLSGKLYFFTSLFGHFSFIVFAVYLLL LFPLSFLIKNERTFRGLSVILATIGQTVLLLDTEVFKQFYLHLSPLVWDLLVNPDQGELTRQWQLLFVPMPLILLVEMLY SRWCWQKLRSFNRQTWGKYVAYFFVSCFTATHLVYAWADMTLYRPITAQKANYPLSHPMTARTFLQKHGLIDQAELQQEI EESGRLDSFYLNYPKHTLIFTQKPTTNLLFINLSGLNNDAITAEYMPTLTEISRKSHRFMQHYSSGDSAAAGVLGLFYSL SGKYLDAVLGNKETSPLLLAFRQSGYQLGLFSHNGFADPIYHQAVFAGILLSESQNNLDAIAQWKQWVTQRSLNEPFFSY LDLAMPSANDYVQQTKLLDWQLNEIWTQLETHALLANTLVILTADQAIPSDKQSENSFAKQHIQVPMMMYWQGEGKQYDF LSSHVDILPTLLNQFFKIKNPLSDYAQGIDLTTQNKRLWLLASNHKWDVAIMPDGEQYHIDKRGHFENFNAQGEKVKSER PPLALFLHMIQQSNQFVEK
Specific function: Unknown
COG id: COG3083
COG function: function code R; Predicted hydrolase of alkaline phosphatase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yejM [H]
Homologues:
Organism=Escherichia coli, GI1788515, Length=580, Percent_Identity=40.1724137931035, Blast_Score=468, Evalue=1e-133,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012159 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 67077; Mature: 67077
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRLRRLLPSNSLQYREETSQRITWGHWFALFNVVLALLIASRYAFNADWPNTLSGKLY CHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH FFTSLFGHFSFIVFAVYLLLLFPLSFLIKNERTFRGLSVILATIGQTVLLLDTEVFKQFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHH LHLSPLVWDLLVNPDQGELTRQWQLLFVPMPLILLVEMLYSRWCWQKLRSFNRQTWGKYV HHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH AYFFVSCFTATHLVYAWADMTLYRPITAQKANYPLSHPMTARTFLQKHGLIDQAELQQEI HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH EESGRLDSFYLNYPKHTLIFTQKPTTNLLFINLSGLNNDAITAEYMPTLTEISRKSHRFM HHCCCCCEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHH QHYSSGDSAAAGVLGLFYSLSGKYLDAVLGNKETSPLLLAFRQSGYQLGLFSHNGFADPI HHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCHH YHQAVFAGILLSESQNNLDAIAQWKQWVTQRSLNEPFFSYLDLAMPSANDYVQQTKLLDW HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHH QLNEIWTQLETHALLANTLVILTADQAIPSDKQSENSFAKQHIQVPMMMYWQGEGKQYDF HHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHH LSSHVDILPTLLNQFFKIKNPLSDYAQGIDLTTQNKRLWLLASNHKWDVAIMPDGEQYHI HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCEEEEEECCCCEEEEECCCCCEEEE DKRGHFENFNAQGEKVKSERPPLALFLHMIQQSNQFVEK CCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNRLRRLLPSNSLQYREETSQRITWGHWFALFNVVLALLIASRYAFNADWPNTLSGKLY CHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH FFTSLFGHFSFIVFAVYLLLLFPLSFLIKNERTFRGLSVILATIGQTVLLLDTEVFKQFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHH LHLSPLVWDLLVNPDQGELTRQWQLLFVPMPLILLVEMLYSRWCWQKLRSFNRQTWGKYV HHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH AYFFVSCFTATHLVYAWADMTLYRPITAQKANYPLSHPMTARTFLQKHGLIDQAELQQEI HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH EESGRLDSFYLNYPKHTLIFTQKPTTNLLFINLSGLNNDAITAEYMPTLTEISRKSHRFM HHCCCCCEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHH QHYSSGDSAAAGVLGLFYSLSGKYLDAVLGNKETSPLLLAFRQSGYQLGLFSHNGFADPI HHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCHH YHQAVFAGILLSESQNNLDAIAQWKQWVTQRSLNEPFFSYLDLAMPSANDYVQQTKLLDW HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHH QLNEIWTQLETHALLANTLVILTADQAIPSDKQSENSFAKQHIQVPMMMYWQGEGKQYDF HHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHH LSSHVDILPTLLNQFFKIKNPLSDYAQGIDLTTQNKRLWLLASNHKWDVAIMPDGEQYHI HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCEEEEEECCCCEEEEECCCCCEEEE DKRGHFENFNAQGEKVKSERPPLALFLHMIQQSNQFVEK CCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]