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The map label for this gene is ybiP [C]

Identifier: 126208050

GI number: 126208050

Start: 640596

End: 642149

Strand: Reverse

Name: ybiP [C]

Synonym: APL_0568

Alternate gene names: 126208050

Gene position: 642149-640596 (Counterclockwise)

Preceding gene: 126208053

Following gene: 126208041

Centisome position: 28.23

GC content: 39.12

Gene sequence:

>1554_bases
ATGATACAAAAATTAACAAAACAACAAATCATTTATACCGTTATTGCCGTTCTACTCGCAATCTTTTCGGGTTATGTGAT
GTTGAAAGGCTCAGGTTTTTTTCCTTCTCCGACCTTAGCCGAAATACTGTTTGCCGTGATACTGATTATCGCATTAGGCA
GTTCTAAGCTCTCTTTTTACGGCTTATTGTTACCGATTGCAATCGGTTATGCGCTTTACACCCCGATTGGTTTATCCTTC
GGCGCACCGTCTTATCAATATATCGCTTCTTTATTCGCCACTGATTTATTGGAAGGCAGAGAATTTCTGTCGCAATTGCC
TCTTACCGACTATTTACTGGCTGTCGGAATGTTGGTAGCGGTCATTTTTTTCCGAAAAATCACGAAAAAACATCGAATCA
ACTTTTTAAATAATCGTGCGTTTATCGTCTGCTCGCTGGTCATTTCCTTATTCAGTCTGGCACCCTTTAAATTCTTTCAC
GAGTTTTTTAACGAAAGTATGAAAGTAAAACAAGAATTGGAAGCCTTAAATAACGGTACGGAAATTCCGTCCGAGTGGGG
AACCTCAACCCTTTCCGCCGATTCGAAATATGACGATTATGTGCTGGTAATCGGCGAAAGCGCACGTAAAGATTACCATC
ACGCTTACGGCTATCCGGTTGAAAATACGCCGTTTATGAGCAATGCGAAAGGCACGTTGATTGACGGTTTTACCGCCGGC
GGCACCAATACTATTGCTTCATTAAAATTGCTATTGACCAAACCGAATACGCAAACTTGGGAAGGCAATTACCGCTTAAA
TTTAGTTGAGCTAGTCAAATCCGCCGGGATTAAAACTTACTGGATTTCCAATCAAGGCTATTTGGGACGTTTTGACACAC
CGATTTCGTCATTGGCAAATAAAAGCGATGAGAAAATCTTTCTAAAAACGGGCGATTCGTTTAGCCAGAATATCAGTGAT
TTCGCTTTATTACCGAAATTTAATCAGATCGTTTCACAAAATGCTCAAGGTAAACGCTTTATTGTAGTACATCTGTACGG
TTCACATCCGATTACCTGTGATCGTCTCACCGATTATCCGAAAATCTTTGATGATGCGAAAATTGCGCAAAAATATCACA
ACGTGAACTGTTATCTTTCTTCGATGAAGAAAACCGATGAATTACTGGAAAAACTGTATAACGAGTTAAATCAAAATAAA
GCAAAAACAGGTAGAAGTTTCTCCATGGTTTACTTTTCCGATCACGGTTTAATTCATAGTGAAGACGATAAAGGCATTCA
TATTTTAAATACTGCACAAGGCAAACTACACTTTGACGTGCCGTTATTTAAAATTTCAAGCGATGATACCGAACGCCACG
TTTATAAAGTGTTTAAATCCGGTTTAAACTTTACCGACGGTATCGGCAAATGGATTGGTATTACTAATGAGAAATTAAAT
CCGCAAGCGGATTTGTTTAGCAATCAAAATGATAAAGACGATTACGGATTAAAGCAAGTGATTGAGAAGATTCCGGCAAA
AGCCGATCCGGCGATTGTGATTCCGATTAAATAA

Upstream 100 bases:

>100_bases
CTTAATGCTGTATGGACTAAAAACAAAATTACGCTATTATAGACCATCCGATTTAAACAGGAAATAAATAAGAAATCATA
TTTATAATTTGGAATAAAAA

Downstream 100 bases:

>100_bases
GTGCGGCAAACACGACAAGCGGTTATTTTTAGTATGCTATTTGCAAAAATCCGAAGAAAAATGACCGCTTGCATAGCAAC
AGACAGAAAAAAAGCAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MIQKLTKQQIIYTVIAVLLAIFSGYVMLKGSGFFPSPTLAEILFAVILIIALGSSKLSFYGLLLPIAIGYALYTPIGLSF
GAPSYQYIASLFATDLLEGREFLSQLPLTDYLLAVGMLVAVIFFRKITKKHRINFLNNRAFIVCSLVISLFSLAPFKFFH
EFFNESMKVKQELEALNNGTEIPSEWGTSTLSADSKYDDYVLVIGESARKDYHHAYGYPVENTPFMSNAKGTLIDGFTAG
GTNTIASLKLLLTKPNTQTWEGNYRLNLVELVKSAGIKTYWISNQGYLGRFDTPISSLANKSDEKIFLKTGDSFSQNISD
FALLPKFNQIVSQNAQGKRFIVVHLYGSHPITCDRLTDYPKIFDDAKIAQKYHNVNCYLSSMKKTDELLEKLYNELNQNK
AKTGRSFSMVYFSDHGLIHSEDDKGIHILNTAQGKLHFDVPLFKISSDDTERHVYKVFKSGLNFTDGIGKWIGITNEKLN
PQADLFSNQNDKDDYGLKQVIEKIPAKADPAIVIPIK

Sequences:

>Translated_517_residues
MIQKLTKQQIIYTVIAVLLAIFSGYVMLKGSGFFPSPTLAEILFAVILIIALGSSKLSFYGLLLPIAIGYALYTPIGLSF
GAPSYQYIASLFATDLLEGREFLSQLPLTDYLLAVGMLVAVIFFRKITKKHRINFLNNRAFIVCSLVISLFSLAPFKFFH
EFFNESMKVKQELEALNNGTEIPSEWGTSTLSADSKYDDYVLVIGESARKDYHHAYGYPVENTPFMSNAKGTLIDGFTAG
GTNTIASLKLLLTKPNTQTWEGNYRLNLVELVKSAGIKTYWISNQGYLGRFDTPISSLANKSDEKIFLKTGDSFSQNISD
FALLPKFNQIVSQNAQGKRFIVVHLYGSHPITCDRLTDYPKIFDDAKIAQKYHNVNCYLSSMKKTDELLEKLYNELNQNK
AKTGRSFSMVYFSDHGLIHSEDDKGIHILNTAQGKLHFDVPLFKISSDDTERHVYKVFKSGLNFTDGIGKWIGITNEKLN
PQADLFSNQNDKDDYGLKQVIEKIPAKADPAIVIPIK
>Mature_517_residues
MIQKLTKQQIIYTVIAVLLAIFSGYVMLKGSGFFPSPTLAEILFAVILIIALGSSKLSFYGLLLPIAIGYALYTPIGLSF
GAPSYQYIASLFATDLLEGREFLSQLPLTDYLLAVGMLVAVIFFRKITKKHRINFLNNRAFIVCSLVISLFSLAPFKFFH
EFFNESMKVKQELEALNNGTEIPSEWGTSTLSADSKYDDYVLVIGESARKDYHHAYGYPVENTPFMSNAKGTLIDGFTAG
GTNTIASLKLLLTKPNTQTWEGNYRLNLVELVKSAGIKTYWISNQGYLGRFDTPISSLANKSDEKIFLKTGDSFSQNISD
FALLPKFNQIVSQNAQGKRFIVVHLYGSHPITCDRLTDYPKIFDDAKIAQKYHNVNCYLSSMKKTDELLEKLYNELNQNK
AKTGRSFSMVYFSDHGLIHSEDDKGIHILNTAQGKLHFDVPLFKISSDDTERHVYKVFKSGLNFTDGIGKWIGITNEKLN
PQADLFSNQNDKDDYGLKQVIEKIPAKADPAIVIPIK

Specific function: Unknown

COG id: COG2194

COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoethanolamine transferase family [H]

Homologues:

Organism=Escherichia coli, GI1787035, Length=434, Percent_Identity=32.4884792626728, Blast_Score=216, Evalue=4e-57,
Organism=Escherichia coli, GI87082223, Length=298, Percent_Identity=28.5234899328859, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1790392, Length=411, Percent_Identity=24.5742092457421, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: NA

Molecular weight: Translated: 57957; Mature: 57957

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQKLTKQQIIYTVIAVLLAIFSGYVMLKGSGFFPSPTLAEILFAVILIIALGSSKLSFY
CCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
GLLLPIAIGYALYTPIGLSFGAPSYQYIASLFATDLLEGREFLSQLPLTDYLLAVGMLVA
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VIFFRKITKKHRINFLNNRAFIVCSLVISLFSLAPFKFFHEFFNESMKVKQELEALNNGT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EIPSEWGTSTLSADSKYDDYVLVIGESARKDYHHAYGYPVENTPFMSNAKGTLIDGFTAG
CCCHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCC
GTNTIASLKLLLTKPNTQTWEGNYRLNLVELVKSAGIKTYWISNQGYLGRFDTPISSLAN
CCCHHEEEEEEEECCCCCEECCCEEEHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHCC
KSDEKIFLKTGDSFSQNISDFALLPKFNQIVSQNAQGKRFIVVHLYGSHPITCDRLTDYP
CCCCEEEEEECCCHHHCCHHHHHCCHHHHHHCCCCCCCEEEEEEEECCCCEEHHHCCCCH
KIFDDAKIAQKYHNVNCYLSSMKKTDELLEKLYNELNQNKAKTGRSFSMVYFSDHGLIHS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEECCCCEEC
EDDKGIHILNTAQGKLHFDVPLFKISSDDTERHVYKVFKSGLNFTDGIGKWIGITNEKLN
CCCCCEEEEEECCCEEEECCEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHEECCCCCCC
PQADLFSNQNDKDDYGLKQVIEKIPAKADPAIVIPIK
CCHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECC
>Mature Secondary Structure
MIQKLTKQQIIYTVIAVLLAIFSGYVMLKGSGFFPSPTLAEILFAVILIIALGSSKLSFY
CCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
GLLLPIAIGYALYTPIGLSFGAPSYQYIASLFATDLLEGREFLSQLPLTDYLLAVGMLVA
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VIFFRKITKKHRINFLNNRAFIVCSLVISLFSLAPFKFFHEFFNESMKVKQELEALNNGT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EIPSEWGTSTLSADSKYDDYVLVIGESARKDYHHAYGYPVENTPFMSNAKGTLIDGFTAG
CCCHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCC
GTNTIASLKLLLTKPNTQTWEGNYRLNLVELVKSAGIKTYWISNQGYLGRFDTPISSLAN
CCCHHEEEEEEEECCCCCEECCCEEEHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHCC
KSDEKIFLKTGDSFSQNISDFALLPKFNQIVSQNAQGKRFIVVHLYGSHPITCDRLTDYP
CCCCEEEEEECCCHHHCCHHHHHCCHHHHHHCCCCCCCEEEEEEEECCCCEEHHHCCCCH
KIFDDAKIAQKYHNVNCYLSSMKKTDELLEKLYNELNQNKAKTGRSFSMVYFSDHGLIHS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEECCCCEEC
EDDKGIHILNTAQGKLHFDVPLFKISSDDTERHVYKVFKSGLNFTDGIGKWIGITNEKLN
CCCCCEEEEEECCCEEEECCEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHEECCCCCCC
PQADLFSNQNDKDDYGLKQVIEKIPAKADPAIVIPIK
CCHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]