| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is flp1
Identifier: 126208041
GI number: 126208041
Start: 627628
End: 627858
Strand: Reverse
Name: flp1
Synonym: APL_0559
Alternate gene names: NA
Gene position: 627858-627628 (Counterclockwise)
Preceding gene: 126208050
Following gene: 126208040
Centisome position: 27.6
GC content: 33.33
Gene sequence:
>231_bases ATGTTATCTAACTTAACAACCAAAGCATATATTTCAGTAACCGAAGGTATCCGTCGTTTTAAAGAAAACCAACAAGGTGT AACCGCAATCGAATACGGTTTAATTGCGGTAGCGGTAGCCGTGTTAATTGTGGCTGTTTTCTATAATAAAGAAGGATTTA TTCAAAAATTACAAGCTAAATTTGGTGATTTAACAAAAGCAATTCAAAACGCCACAACTACTGTTAAATAA
Upstream 100 bases:
>100_bases TTAATTTTATCGCCCCGTTATCGCTTAGGACCTCTTTCCGGCGGTAACGCTAATTTGTTCCATTGTTAAACAAAATTAAA TAATTTAAGGAGATTATTAC
Downstream 100 bases:
>100_bases TTATGAAGAATCCTTATGCAATATTTCAAGTATAAGGATTCCCTATTTTTCTAAAATAAATGGAAAAATTATTGCAGTTT TATCGGCAACAACAAGGTAT
Product: fimbrial protein Flp precursor
Products: NA
Alternate protein names: Fimbrial Protein Flp
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MLSNLTTKAYISVTEGIRRFKENQQGVTAIEYGLIAVAVAVLIVAVFYNKEGFIQKLQAKFGDLTKAIQNATTTVK
Sequences:
>Translated_76_residues MLSNLTTKAYISVTEGIRRFKENQQGVTAIEYGLIAVAVAVLIVAVFYNKEGFIQKLQAKFGDLTKAIQNATTTVK >Mature_76_residues MLSNLTTKAYISVTEGIRRFKENQQGVTAIEYGLIAVAVAVLIVAVFYNKEGFIQKLQAKFGDLTKAIQNATTTVK
Specific function: Unknown
COG id: COG3847
COG function: function code U; Flp pilus assembly protein, pilin Flp
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8338; Mature: 8338
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNLTTKAYISVTEGIRRFKENQQGVTAIEYGLIAVAVAVLIVAVFYNKEGFIQKLQAK CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH FGDLTKAIQNATTTVK HHHHHHHHHHHCCCCC >Mature Secondary Structure MLSNLTTKAYISVTEGIRRFKENQQGVTAIEYGLIAVAVAVLIVAVFYNKEGFIQKLQAK CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH FGDLTKAIQNATTTVK HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA