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The map label for this gene is pssA [H]

Identifier: 126207531

GI number: 126207531

Start: 47008

End: 48372

Strand: Reverse

Name: pssA [H]

Synonym: APL_0043

Alternate gene names: 126207531

Gene position: 48372-47008 (Counterclockwise)

Preceding gene: 126207532

Following gene: 126207530

Centisome position: 2.13

GC content: 39.85

Gene sequence:

>1365_bases
ATGCTCATTCTCAATAAACCTAATCACGCCAAAAAACAGCTGGAAGCATTACGTTTTATCCCGCAAACGGCGGATAAAGT
GGAATTTCTATCCGATAGTCGTGAGTTCAAAGAGCGCATTTTAACGCTAATCAAAAATGCAAAAAAACGCATTTATTTAA
CCGCTTTATATTTTGAACAAGATGAAGCGGGGCAAGAAGTTTTAACCGCTTTATATCAAGCGAAACGAGATAATCCTACG
CTCGATATTAAAGTCCTCGTCGATTGGCACAGAGCGCAACGAGGTCGTATCGGAGAAGAAACGACAAGTTCAAATGCCGA
TTGGTATGTAAAAATCAAACAACAATATAATTTACCGACTGATCAAGAAATTCAGTTTTGGGGCGTGCCGGTTAATCGCA
AAGAGTTATTCGGCGTATTGCATTTAAAAGGCTTTATCTTCGATGATACGTTACTCTATAGCGGCGCAAGTATTAATAAC
GTCTATCTGCAACAATTCGAACGTTATCGTTACGACCGTTATCATGTGATTGAAAATAAAGCCTTAACCGATGCCATAGT
CGAGTTTGCCGATACGCATATTTTGCAGCATGATGCGGTAAATCGTCTGGATAATGCCAACCGTCCGAAAACGCACGAAA
TTCGACCGCTTATCAAAGCGTTTCGTAAATATTTATCCGCACAAAGTTATATATTTAACGGACAGCCGCAAAGTGATCAA
TTGAGCTTATCGCCGTTAGTCGGTTTAGGACGTAAAAATGCGTTAAATAAAACCATTGAAGCCTTGTTTTATCAGGTGGA
AGATAAATTAACGATATGTACGCCGTATTTTAATTTTCCGCTTTCGCTCTATAAGCGTTTAAATTGGTTATTGGATCACG
GTAAAAAAGCGGAAATTATTGTCGGCGATAAAACCGCCAACGATTTTTATACGCCGCCGGAAGAAAAATTTACGATGGCA
TCGGCATTGCCGTATTTATATGAGAAAAATTTACGCGCCTTTGCCAAACGTTTTGATCGTTATATTCAGAACGGGCAATT
AACCGTACGTCTATGGAAACACGGCGATAATAGTTACCATCTGAAAGGGGTATGGATTGATAGCCGCTACATTCTACTAA
CCGGCAACAATCTAAATCCTCGAGCGTGGGCTTTAGATGCGGAAAATGCGGTATTAATTTATGACCCGAAAGCCGAACTA
AGCGCAAAGGCAGAAACCGAATTAACGCAGATTCGTACTCATACGACGGTTTTAAAACACTATAGTGACTTAGAGCAAAT
TAACGATTATCCCGAAGCGGTACGAAAACTGTTAAAACGTTTCGGTCGAGTGAAGTTGGATAAAGTCGTCAAAATGTTGT
TATAA

Upstream 100 bases:

>100_bases
AGTTATTTTTAATCAATAGCTTCCGTAAATTCTGTCGCAGAGCGACAACGATATACTAACCCGATATATTACTATCGGGT
CTATCATATAGGATCGTAAA

Downstream 100 bases:

>100_bases
ATTATTTGATTTATCACGGATAACATAGATTTGTATAAAACTTTGTTATCCGTCTTTTTTATTTACAAAGGAATAAAAAT
GAGCGAACAAATTTATGGTA

Product: phosphatidylserine synthase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MLILNKPNHAKKQLEALRFIPQTADKVEFLSDSREFKERILTLIKNAKKRIYLTALYFEQDEAGQEVLTALYQAKRDNPT
LDIKVLVDWHRAQRGRIGEETTSSNADWYVKIKQQYNLPTDQEIQFWGVPVNRKELFGVLHLKGFIFDDTLLYSGASINN
VYLQQFERYRYDRYHVIENKALTDAIVEFADTHILQHDAVNRLDNANRPKTHEIRPLIKAFRKYLSAQSYIFNGQPQSDQ
LSLSPLVGLGRKNALNKTIEALFYQVEDKLTICTPYFNFPLSLYKRLNWLLDHGKKAEIIVGDKTANDFYTPPEEKFTMA
SALPYLYEKNLRAFAKRFDRYIQNGQLTVRLWKHGDNSYHLKGVWIDSRYILLTGNNLNPRAWALDAENAVLIYDPKAEL
SAKAETELTQIRTHTTVLKHYSDLEQINDYPEAVRKLLKRFGRVKLDKVVKMLL

Sequences:

>Translated_454_residues
MLILNKPNHAKKQLEALRFIPQTADKVEFLSDSREFKERILTLIKNAKKRIYLTALYFEQDEAGQEVLTALYQAKRDNPT
LDIKVLVDWHRAQRGRIGEETTSSNADWYVKIKQQYNLPTDQEIQFWGVPVNRKELFGVLHLKGFIFDDTLLYSGASINN
VYLQQFERYRYDRYHVIENKALTDAIVEFADTHILQHDAVNRLDNANRPKTHEIRPLIKAFRKYLSAQSYIFNGQPQSDQ
LSLSPLVGLGRKNALNKTIEALFYQVEDKLTICTPYFNFPLSLYKRLNWLLDHGKKAEIIVGDKTANDFYTPPEEKFTMA
SALPYLYEKNLRAFAKRFDRYIQNGQLTVRLWKHGDNSYHLKGVWIDSRYILLTGNNLNPRAWALDAENAVLIYDPKAEL
SAKAETELTQIRTHTTVLKHYSDLEQINDYPEAVRKLLKRFGRVKLDKVVKMLL
>Mature_454_residues
MLILNKPNHAKKQLEALRFIPQTADKVEFLSDSREFKERILTLIKNAKKRIYLTALYFEQDEAGQEVLTALYQAKRDNPT
LDIKVLVDWHRAQRGRIGEETTSSNADWYVKIKQQYNLPTDQEIQFWGVPVNRKELFGVLHLKGFIFDDTLLYSGASINN
VYLQQFERYRYDRYHVIENKALTDAIVEFADTHILQHDAVNRLDNANRPKTHEIRPLIKAFRKYLSAQSYIFNGQPQSDQ
LSLSPLVGLGRKNALNKTIEALFYQVEDKLTICTPYFNFPLSLYKRLNWLLDHGKKAEIIVGDKTANDFYTPPEEKFTMA
SALPYLYEKNLRAFAKRFDRYIQNGQLTVRLWKHGDNSYHLKGVWIDSRYILLTGNNLNPRAWALDAENAVLIYDPKAEL
SAKAETELTQIRTHTTVLKHYSDLEQINDYPEAVRKLLKRFGRVKLDKVVKMLL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87082134, Length=434, Percent_Identity=53.6866359447005, Blast_Score=479, Evalue=1e-136,
Organism=Caenorhabditis elegans, GI25143331, Length=460, Percent_Identity=22.1739130434783, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28572961, Length=424, Percent_Identity=23.8207547169811, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016270
- InterPro:   IPR001736 [H]

Pfam domain/function: PF00614 PLDc [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 53007; Mature: 53007

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILNKPNHAKKQLEALRFIPQTADKVEFLSDSREFKERILTLIKNAKKRIYLTALYFEQ
CEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEEECC
DEAGQEVLTALYQAKRDNPTLDIKVLVDWHRAQRGRIGEETTSSNADWYVKIKQQYNLPT
CCHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHCCCCCCCCCCCCCCEEEEEEEECCCCC
DQEIQFWGVPVNRKELFGVLHLKGFIFDDTLLYSGASINNVYLQQFERYRYDRYHVIENK
CCCEEEEECCCCHHHHHHHHHHHCEEEECHHHCCCCCCCHHHHHHHHHHCCCCEEEECCH
ALTDAIVEFADTHILQHDAVNRLDNANRPKTHEIRPLIKAFRKYLSAQSYIFNGQPQSDQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCC
LSLSPLVGLGRKNALNKTIEALFYQVEDKLTICTPYFNFPLSLYKRLNWLLDHGKKAEII
EECCHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
VGDKTANDFYTPPEEKFTMASALPYLYEKNLRAFAKRFDRYIQNGQLTVRLWKHGDNSYH
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEE
LKGVWIDSRYILLTGNNLNPRAWALDAENAVLIYDPKAELSAKAETELTQIRTHTTVLKH
EEEEEEECEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
YSDLEQINDYPEAVRKLLKRFGRVKLDKVVKMLL
HHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHC
>Mature Secondary Structure
MLILNKPNHAKKQLEALRFIPQTADKVEFLSDSREFKERILTLIKNAKKRIYLTALYFEQ
CEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEEECC
DEAGQEVLTALYQAKRDNPTLDIKVLVDWHRAQRGRIGEETTSSNADWYVKIKQQYNLPT
CCHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHCCCCCCCCCCCCCCEEEEEEEECCCCC
DQEIQFWGVPVNRKELFGVLHLKGFIFDDTLLYSGASINNVYLQQFERYRYDRYHVIENK
CCCEEEEECCCCHHHHHHHHHHHCEEEECHHHCCCCCCCHHHHHHHHHHCCCCEEEECCH
ALTDAIVEFADTHILQHDAVNRLDNANRPKTHEIRPLIKAFRKYLSAQSYIFNGQPQSDQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCC
LSLSPLVGLGRKNALNKTIEALFYQVEDKLTICTPYFNFPLSLYKRLNWLLDHGKKAEII
EECCHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
VGDKTANDFYTPPEEKFTMASALPYLYEKNLRAFAKRFDRYIQNGQLTVRLWKHGDNSYH
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEE
LKGVWIDSRYILLTGNNLNPRAWALDAENAVLIYDPKAELSAKAETELTQIRTHTTVLKH
EEEEEEECEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
YSDLEQINDYPEAVRKLLKRFGRVKLDKVVKMLL
HHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]