| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yhhW [C]
Identifier: 126176486
GI number: 126176486
Start: 5037071
End: 5037994
Strand: Direct
Name: yhhW [C]
Synonym: Sbal_4301
Alternate gene names: 126176486
Gene position: 5037071-5037994 (Clockwise)
Preceding gene: 126176478
Following gene: 126176487
Centisome position: 98.24
GC content: 53.79
Gene sequence:
>924_bases ATGAGTGAAGTTCAAGCACAGTTTTATGGAGGCCCTAAGGAATGCCCTATTGAAAATGGCCGCATTCAAGTTCAACGAAT TTCCCCAAAAATCAGTGATGTCGGCGGCATTCCCGTCGCACGGGCGATCCCACAAAAAGAGCGTCGTCTTATCGGCCCTT GGTGTTTCCTCGACCATATTGGCCCCGTTACCGACGGCCCAGAGTTAAACGTTGGCCAGCATCCGCACATTGGGCTGCAA ACTTTTACTTGGATGCTCGAAGGCGAAATCATGCACAAGGACAGTCTCGGCAGCGCCCAAGTGATCCGCCCTAAACAAGT TAACTTGATGACCGCCGGACACGGTATCGCCCACACCGAAGAATCCGTCGCAGGCCATAGCACTATGCACGCGGCGCAGC TGTGGATTGCCCTGCCGCTTGAGCATAAAGACACAACTCCGAGATTCGATCACTATCCCGAACTCCCAACTTGGCACGAT GCGGGCGTTGATTTCACTCTACTGATTGGCAGTTGGCTGCATCAACAGGCGCCCACATTGCACTTCTCGCCGATAGTGGC GATGGATTTGTTTGCCGCCGAAAACACTGAGCTCACTCTGACTCTCGACCCGAGTTTTGAATATGCCCTCATGCCACTCG AAGGCTTTTTCCGCATCGATGACCAAAGCTTCAACAATAACGACCTCGCCTATCTGGGGATGTTACGCGAAAGCGTCACT GTCGAACTCGACGCGGGTTGCCGCATATTGCTGATTGGCGGCGCGCCACTGGCCGACCCTGTCAGTATTTGGTGGAATTT TGTTGGCCATAGCAAAGACGAAATCGCTCAGGCTCAAGCGGATTGGGAAGCCCACTCGACACGTTTTGATACTGTGCCCG GCTATGAGGGCAAGCGCTTAGTGCCACCGCCGATACCTTGGTGA
Upstream 100 bases:
>100_bases TAAAACCTTCGGCTCGAATGCAAGATGGGATCTGAAACCAGTTCAGCATGCCAGACTAACACTAACTAAGTGTGTCCTCG CAAAGGAATAAGGAGCGAAC
Downstream 100 bases:
>100_bases TCTTCAGCTAAAGAATGGCAGGCAAATACTTGATAGCGAGCCCATTAGCATCAATCCGATAACGGCCCACGCCTAGAATG GCTTACCCCATAAGTTTATG
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA1205 [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSEVQAQFYGGPKECPIENGRIQVQRISPKISDVGGIPVARAIPQKERRLIGPWCFLDHIGPVTDGPELNVGQHPHIGLQ TFTWMLEGEIMHKDSLGSAQVIRPKQVNLMTAGHGIAHTEESVAGHSTMHAAQLWIALPLEHKDTTPRFDHYPELPTWHD AGVDFTLLIGSWLHQQAPTLHFSPIVAMDLFAAENTELTLTLDPSFEYALMPLEGFFRIDDQSFNNNDLAYLGMLRESVT VELDAGCRILLIGGAPLADPVSIWWNFVGHSKDEIAQAQADWEAHSTRFDTVPGYEGKRLVPPPIPW
Sequences:
>Translated_307_residues MSEVQAQFYGGPKECPIENGRIQVQRISPKISDVGGIPVARAIPQKERRLIGPWCFLDHIGPVTDGPELNVGQHPHIGLQ TFTWMLEGEIMHKDSLGSAQVIRPKQVNLMTAGHGIAHTEESVAGHSTMHAAQLWIALPLEHKDTTPRFDHYPELPTWHD AGVDFTLLIGSWLHQQAPTLHFSPIVAMDLFAAENTELTLTLDPSFEYALMPLEGFFRIDDQSFNNNDLAYLGMLRESVT VELDAGCRILLIGGAPLADPVSIWWNFVGHSKDEIAQAQADWEAHSTRFDTVPGYEGKRLVPPPIPW >Mature_306_residues SEVQAQFYGGPKECPIENGRIQVQRISPKISDVGGIPVARAIPQKERRLIGPWCFLDHIGPVTDGPELNVGQHPHIGLQT FTWMLEGEIMHKDSLGSAQVIRPKQVNLMTAGHGIAHTEESVAGHSTMHAAQLWIALPLEHKDTTPRFDHYPELPTWHDA GVDFTLLIGSWLHQQAPTLHFSPIVAMDLFAAENTELTLTLDPSFEYALMPLEGFFRIDDQSFNNNDLAYLGMLRESVTV ELDAGCRILLIGGAPLADPVSIWWNFVGHSKDEIAQAQADWEAHSTRFDTVPGYEGKRLVPPPIPW
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=287, Percent_Identity=26.1324041811847, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4505823, Length=287, Percent_Identity=26.1324041811847, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 34156; Mature: 34025
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVQAQFYGGPKECPIENGRIQVQRISPKISDVGGIPVARAIPQKERRLIGPWCFLDHI CCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCCHHHCCCHHHHEEECCEEEHHCC GPVTDGPELNVGQHPHIGLQTFTWMLEGEIMHKDSLGSAQVIRPKQVNLMTAGHGIAHTE CCCCCCCCCCCCCCCCCCHHEEEEEEECEEEECCCCCCCEEECCCEEEEEECCCCCCCCH ESVAGHSTMHAAQLWIALPLEHKDTTPRFDHYPELPTWHDAGVDFTLLIGSWLHQQAPTL HHHCCCCHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCE HFSPIVAMDLFAAENTELTLTLDPSFEYALMPLEGFFRIDDQSFNNNDLAYLGMLRESVT EECCHHEEEEEECCCCEEEEEECCCCCEEEECCCCEEEECCCCCCCCCEEEEEEECCCEE VELDAGCRILLIGGAPLADPVSIWWNFVGHSKDEIAQAQADWEAHSTRFDTVPGYEGKRL EEECCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCEE VPPPIPW CCCCCCC >Mature Secondary Structure SEVQAQFYGGPKECPIENGRIQVQRISPKISDVGGIPVARAIPQKERRLIGPWCFLDHI CCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCCHHHCCCHHHHEEECCEEEHHCC GPVTDGPELNVGQHPHIGLQTFTWMLEGEIMHKDSLGSAQVIRPKQVNLMTAGHGIAHTE CCCCCCCCCCCCCCCCCCHHEEEEEEECEEEECCCCCCCEEECCCEEEEEECCCCCCCCH ESVAGHSTMHAAQLWIALPLEHKDTTPRFDHYPELPTWHDAGVDFTLLIGSWLHQQAPTL HHHCCCCHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCE HFSPIVAMDLFAAENTELTLTLDPSFEYALMPLEGFFRIDDQSFNNNDLAYLGMLRESVT EECCHHEEEEEECCCCEEEEEECCCCCEEEECCCCEEEECCCCCCCCCEEEEEEECCCEE VELDAGCRILLIGGAPLADPVSIWWNFVGHSKDEIAQAQADWEAHSTRFDTVPGYEGKRL EEECCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCEE VPPPIPW CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]