Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is 126176418

Identifier: 126176418

GI number: 126176418

Start: 4961237

End: 4962040

Strand: Direct

Name: 126176418

Synonym: Sbal_4233

Alternate gene names: NA

Gene position: 4961237-4962040 (Clockwise)

Preceding gene: 126176417

Following gene: 126176420

Centisome position: 96.76

GC content: 50.5

Gene sequence:

>804_bases
ATGTGCATACTCTTTGTCGCCATTAATGCCCATCCTAAGTATCCCTTAATCATCTGTGCCAACCGTGACGAGTTTCACCA
TAGACCGACCGCGCCGGCGCACTTTTGGCCACCGGAAGAAAACATACTCGCAGGTAAAGATCTGCAGGCGGGCGGCACTT
GGTTTGGGGTGAATAAACAGGGACAAGTCGCCGCAGTGACAAATCTGCGCGTACCGCAAAAAAAACCAGAAGCCATGCGT
AGCCGTGGCGAACTCATTACTATGACGCTCAACTCTGGGTCGCTCGTGTGCCCGAATTGGCTCATTGAACACAGTGACAA
TTATCAGCCATTCAATCTCGTCTTCGGCCAAGGTACTGACTTATATTGTTTTAACAGTATCAATAAAGACACAGTCAAAC
TCGCCGATGGGTTTCATGCCATTAGCAATGGTGCACTCGATGATATTTGGCCGAAAATGGCGAAGGGACAGCAAGCGCTA
GAAGCCGTGATCAATCAGTCCGACAACCTAGAAGTGCAAGCGCTGTTACAGTTGATGAAAGACGACTCCCAACCACAAGA
TAATGAATTGCCTAACACGGGAGTGGGGATCGAGTGGGAACGGCGCTTAGCCGCGATTTATATTCGTCACCCCGACTATG
GCACGCGCTCCACCAGCATTCTGCTTGAAGATGCTGAGGGCGGCATGCATTTTACCGAAGTGAGATACGACGGCAAAGGT
CGACAGCTCGGACAACAGGATTTCCATTTAACCCTGCCCGCCGAGCCCCCCGCTAAGCCAGACTGTTTATTAACGCAAAT
CTAA

Upstream 100 bases:

>100_bases
CACGATAAAGCAAAAGCAAATAAGCACACGCACCACTAACACTGTTCATTTGTGAGCAGACAGGCTAAGTTAATCTACCT
TTGGATTAATTTAGCCTGCT

Downstream 100 bases:

>100_bases
ACTGAACAACTGTGCAGCCTTGTATTGAAACGGCGCACTTTAGTCAGCGCTATTGTTCAATTAAAGCCGTGGCTTAGTCC
GAACTATGATCCATAGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQGQVAAVTNLRVPQKKPEAMR
SRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLVFGQGTDLYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQAL
EAVINQSDNLEVQALLQLMKDDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG
RQLGQQDFHLTLPAEPPAKPDCLLTQI

Sequences:

>Translated_267_residues
MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQGQVAAVTNLRVPQKKPEAMR
SRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLVFGQGTDLYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQAL
EAVINQSDNLEVQALLQLMKDDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG
RQLGQQDFHLTLPAEPPAKPDCLLTQI
>Mature_267_residues
MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQGQVAAVTNLRVPQKKPEAMR
SRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLVFGQGTDLYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQAL
EAVINQSDNLEVQALLQLMKDDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG
RQLGQQDFHLTLPAEPPAKPDCLLTQI

Specific function: Unknown

COG id: COG3332

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190570176, Length=255, Percent_Identity=33.7254901960784, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17566294, Length=262, Percent_Identity=27.8625954198473, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17563216, Length=262, Percent_Identity=29.0076335877863, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6321566, Length=281, Percent_Identity=27.4021352313167, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29784; Mature: 29784

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQ
CEEEEEEECCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCC
GQVAAVTNLRVPQKKPEAMRSRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLVFGQGTD
CCEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCEECCCCEEECCCCCCCEEEEEECCCC
LYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQALEAVINQSDNLEVQALLQLMK
EEEECCCCCCEEEECCCHHHHCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHH
DDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG
CCCCCCCCCCCCCCCCCEEECEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEECCCC
RQLGQQDFHLTLPAEPPAKPDCLLTQI
CCCCCCCEEEECCCCCCCCCCEEEECC
>Mature Secondary Structure
MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQ
CEEEEEEECCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCC
GQVAAVTNLRVPQKKPEAMRSRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLVFGQGTD
CCEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCEECCCCEEECCCCCCCEEEEEECCCC
LYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQALEAVINQSDNLEVQALLQLMK
EEEECCCCCCEEEECCCHHHHCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHH
DDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG
CCCCCCCCCCCCCCCCCEEECEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEECCCC
RQLGQQDFHLTLPAEPPAKPDCLLTQI
CCCCCCCEEEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA