| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176418
Identifier: 126176418
GI number: 126176418
Start: 4961237
End: 4962040
Strand: Direct
Name: 126176418
Synonym: Sbal_4233
Alternate gene names: NA
Gene position: 4961237-4962040 (Clockwise)
Preceding gene: 126176417
Following gene: 126176420
Centisome position: 96.76
GC content: 50.5
Gene sequence:
>804_bases ATGTGCATACTCTTTGTCGCCATTAATGCCCATCCTAAGTATCCCTTAATCATCTGTGCCAACCGTGACGAGTTTCACCA TAGACCGACCGCGCCGGCGCACTTTTGGCCACCGGAAGAAAACATACTCGCAGGTAAAGATCTGCAGGCGGGCGGCACTT GGTTTGGGGTGAATAAACAGGGACAAGTCGCCGCAGTGACAAATCTGCGCGTACCGCAAAAAAAACCAGAAGCCATGCGT AGCCGTGGCGAACTCATTACTATGACGCTCAACTCTGGGTCGCTCGTGTGCCCGAATTGGCTCATTGAACACAGTGACAA TTATCAGCCATTCAATCTCGTCTTCGGCCAAGGTACTGACTTATATTGTTTTAACAGTATCAATAAAGACACAGTCAAAC TCGCCGATGGGTTTCATGCCATTAGCAATGGTGCACTCGATGATATTTGGCCGAAAATGGCGAAGGGACAGCAAGCGCTA GAAGCCGTGATCAATCAGTCCGACAACCTAGAAGTGCAAGCGCTGTTACAGTTGATGAAAGACGACTCCCAACCACAAGA TAATGAATTGCCTAACACGGGAGTGGGGATCGAGTGGGAACGGCGCTTAGCCGCGATTTATATTCGTCACCCCGACTATG GCACGCGCTCCACCAGCATTCTGCTTGAAGATGCTGAGGGCGGCATGCATTTTACCGAAGTGAGATACGACGGCAAAGGT CGACAGCTCGGACAACAGGATTTCCATTTAACCCTGCCCGCCGAGCCCCCCGCTAAGCCAGACTGTTTATTAACGCAAAT CTAA
Upstream 100 bases:
>100_bases CACGATAAAGCAAAAGCAAATAAGCACACGCACCACTAACACTGTTCATTTGTGAGCAGACAGGCTAAGTTAATCTACCT TTGGATTAATTTAGCCTGCT
Downstream 100 bases:
>100_bases ACTGAACAACTGTGCAGCCTTGTATTGAAACGGCGCACTTTAGTCAGCGCTATTGTTCAATTAAAGCCGTGGCTTAGTCC GAACTATGATCCATAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQGQVAAVTNLRVPQKKPEAMR SRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLVFGQGTDLYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQAL EAVINQSDNLEVQALLQLMKDDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG RQLGQQDFHLTLPAEPPAKPDCLLTQI
Sequences:
>Translated_267_residues MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQGQVAAVTNLRVPQKKPEAMR SRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLVFGQGTDLYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQAL EAVINQSDNLEVQALLQLMKDDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG RQLGQQDFHLTLPAEPPAKPDCLLTQI >Mature_267_residues MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQGQVAAVTNLRVPQKKPEAMR SRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLVFGQGTDLYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQAL EAVINQSDNLEVQALLQLMKDDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG RQLGQQDFHLTLPAEPPAKPDCLLTQI
Specific function: Unknown
COG id: COG3332
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI190570176, Length=255, Percent_Identity=33.7254901960784, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17566294, Length=262, Percent_Identity=27.8625954198473, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17563216, Length=262, Percent_Identity=29.0076335877863, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321566, Length=281, Percent_Identity=27.4021352313167, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29784; Mature: 29784
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQ CEEEEEEECCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCC GQVAAVTNLRVPQKKPEAMRSRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLVFGQGTD CCEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCEECCCCEEECCCCCCCEEEEEECCCC LYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQALEAVINQSDNLEVQALLQLMK EEEECCCCCCEEEECCCHHHHCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHH DDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG CCCCCCCCCCCCCCCCCEEECEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEECCCC RQLGQQDFHLTLPAEPPAKPDCLLTQI CCCCCCCEEEECCCCCCCCCCEEEECC >Mature Secondary Structure MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQ CEEEEEEECCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCC GQVAAVTNLRVPQKKPEAMRSRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLVFGQGTD CCEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCEECCCCEEECCCCCCCEEEEEECCCC LYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQALEAVINQSDNLEVQALLQLMK EEEECCCCCCEEEECCCHHHHCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHH DDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG CCCCCCCCCCCCCCCCCEEECEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEECCCC RQLGQQDFHLTLPAEPPAKPDCLLTQI CCCCCCCEEEECCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA