| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is ppc [H]
Identifier: 126176310
GI number: 126176310
Start: 4835240
End: 4837909
Strand: Direct
Name: ppc [H]
Synonym: Sbal_4125
Alternate gene names: 126176310
Gene position: 4835240-4837909 (Clockwise)
Preceding gene: 126176304
Following gene: 126176311
Centisome position: 94.3
GC content: 50.97
Gene sequence:
>2670_bases ATGGTTGTAACCAAGGCAGACAATATGACCGATATGTATGCGTCATTAAGATCGAACGTGAGTATGTTAGGACAAATCCT CGGTGACACTATGCGCACCCACCTCGGGGACTCTTTTCTCGAGAAGGTTGAACAGATCCGTAAACTTGCTAAAGATTCAC GCCGGGGCGATCAAGCCGCCAGAGAGCAAATGCTCGAGTTACTCACCGCCCTGCCAGACGAAGAATTAGTTCCGTTTGCA AAGGCATTTAACCAGTTCCTCAACTTAGCTAATTTATCTGAACAATTTCATACCATTAGCCGCAACTGCGACGAACTCGT CTGCGTACCAGATCCCGTGGAACAGCTGCTAGGCCGCATGTTAAATGGCCGTGTAGACCAAACGAAAATGCTCGACTGCC TTAAGACACTGGATATCGATCTAGTGCTGACAGCGCATCCCACTGAAATTTCCCGTCGCACTCTGATCCAAAAATACGCC GCCATTGTCGACTGCTTAACTGAGCAAGAAAACGACCAATTATCAGATAGAGAGCGTCAGCAAATCAGTCTGCGCCTGCG CCAATTGATCGCGCAAATCTGGCACACCAATGAGATCCGCCGTGAGCGCCCAACACCTGTTGATGAAGCCCGCTGGGGAT TATCGACCATTGAAGAGTCACTCTGGCATGCGGTGCCAGACTTCTTAAGACAGCTTAACGACCAAGTGCAACAACGCACG GGTCAACAATTACCGATTGATATCGCGCCAGTGCGTTTTTCAAGCTGGATGGGCGGCGATCGCGACGGCAACCCCTTTGT GACCGCGAAGGTCACCCAAGAGGTGCTCGATCGCAACCGCCATGCCGCCGCCAGATTATTCTTAAAAGACATAGTCCTGC TGGTTGGCGAGCTGTCGATGGAAGAAGCCAATGATGAGTTAAAGGCTTACACCAACAACAGCTGCGAGCCATACCGCCAC GTGTTGCGCTCTATTCGTCAAAGACTGCGTGACACCATAGATTATTTAAATGCGCGCATCGAAGGCCACAATCCTGAAGT CGATAAGTCGAGCCTGATTTGGCAAGAAAGCGATCTCAAAGCGCCGTTAGAAATGCTTTATAAGAGTTTGACCGACTGCG GTATGCGCTTAATCGCCAACGGTCTATTACTCGATATTCTCCGTCGTCTCGCCTGTTTTGGCATTCACATGCTCAGACTC GATATTCGCCAAGACGCCAGCCGTCACAGCGATGTGCTCGCCGAATTGACTCGCTATCTCGGCATGGGTGATTTCAACCA TTGGGATGAAACCGAGAAACAAGCCTTCCTATTACGCGAACTCAGCAACCGTCGTCCGCTGATCCCAAGTAACTGGCAGC CGTCAGCCGATGTGGCCGAAGTGCTTAATACCTGTCGTTTGATCGCAAAACATCCGGCTAAGGCACTTGGTTCCTATGTG ATCTCGATGGCGGGTAAGCCATCGGATGTCTTAACGGTTTTACTGTTACTCAAAGAAACGGGCTGTTCGCACCCAATGCG CGTGGTGCCGCTGTTTGAAACCCTAAGCGACTTAAACAACGCCGCAGCCTGTATTACCGATTTACTCGATATCGACTGGT ATCGTGGTTATACCAAGGGCATGCAAGAAGTGATGATTGGCTACTCTGACTCTGCTAAAGATGCCGGCGTAATGGCGGCG GCTTGGGCTCAGTATCACGCTCAAGAGCAGTTAGTGGCCGTCTGTAAACAAGCGGGCGTCAAGCTCACACTATTCCATGG CCGCGGCGGCAGCATTGGTCGCGGCGGCGGTCCTGCACACAAAGCGATTCTATCCCAACCTCCAGGGTCGGTAGATGGCC GTATTCGTGTCACTGAGCAAGGCGAAATGATCCGCTTCAAGTTTGGCTTGCCAAAACTCGCGGTTCAAAGCTTAGCTCTG TATACCTCTGCCGTATTGGAAGCAACCCTGTTACCACCGCCAGAACCCAAGCAGCAATGGCGTGATTGCATGCAACGTAT CGCTGAAGAATCAGTAGGAGCCTATCGTGGCATAGTGCGTGATGAGCCTGATTTTGTGGCTTATTTCCGCGCTGCAACCC CAGAAGTGGAATTAGGCAAGCTGCCACTCGGCAGCCGCCCAGCTAAACGTCGTGTCGATGGAGGGATTGAAAGCCTACGG GCAATTCCGTGGATTTTTGCTTGGTCGCAAAACCGCTTGATGTTACCTGCATGGCTTGGCGCCGGTGAAGCCCTTCAAGC CGCCAGTGAACGCGGTGAAATGGGTTTACTGCAAGATATGGAACGGGAATGGCCCTTCTTCAGCACTCGCATTTCAATGC TAGAAATGGTCTACGCCAAGGCGGAACCTAATTTAGCCCGCTACTACGAAACCTGTTTAGTACCGAAAGACTTGCATCAC TTAGGCGAAACCTTGCGCCAACGCTTAGATCTGGGCATTAAAGTCGTGCTTGAACTGACAAAATCAGATAGCTTAATGGC GCATACGCCGTGGAATCGCGAGTCAGTAAAACTGCGAAATCCGTATATCGATCCATTAAACTTCTTACAAACCGAGCTAT TAGCGCGGACACGTAAGGAAACAACAGAAACTCCCGCGTCTGAACATGTGCAGCTAGCGCTAATGCTGACTATTGCGGGT GTGGCAGCGGGAATGAGAAATACTGGTTAA
Upstream 100 bases:
>100_bases GTTATAAGTTCTTCTGTTGACCATTGCCCCAAGTGATAGGTATTGTGCTAACGGGCTAAATGCAATGCGGAATTTTCATG TTTTTCTATTCGGAGTAACT
Downstream 100 bases:
>100_bases TGAAAAAACTTTCCCGCACGATTTGCTTGGGACTGACTGTACTACTTGGCGGCTGCGTCTCGCAGTACAGTATCAGCGAG CACGAAATGGAGCAGTACCT
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 889; Mature: 889
Protein sequence:
>889_residues MVVTKADNMTDMYASLRSNVSMLGQILGDTMRTHLGDSFLEKVEQIRKLAKDSRRGDQAAREQMLELLTALPDEELVPFA KAFNQFLNLANLSEQFHTISRNCDELVCVPDPVEQLLGRMLNGRVDQTKMLDCLKTLDIDLVLTAHPTEISRRTLIQKYA AIVDCLTEQENDQLSDRERQQISLRLRQLIAQIWHTNEIRRERPTPVDEARWGLSTIEESLWHAVPDFLRQLNDQVQQRT GQQLPIDIAPVRFSSWMGGDRDGNPFVTAKVTQEVLDRNRHAAARLFLKDIVLLVGELSMEEANDELKAYTNNSCEPYRH VLRSIRQRLRDTIDYLNARIEGHNPEVDKSSLIWQESDLKAPLEMLYKSLTDCGMRLIANGLLLDILRRLACFGIHMLRL DIRQDASRHSDVLAELTRYLGMGDFNHWDETEKQAFLLRELSNRRPLIPSNWQPSADVAEVLNTCRLIAKHPAKALGSYV ISMAGKPSDVLTVLLLLKETGCSHPMRVVPLFETLSDLNNAAACITDLLDIDWYRGYTKGMQEVMIGYSDSAKDAGVMAA AWAQYHAQEQLVAVCKQAGVKLTLFHGRGGSIGRGGGPAHKAILSQPPGSVDGRIRVTEQGEMIRFKFGLPKLAVQSLAL YTSAVLEATLLPPPEPKQQWRDCMQRIAEESVGAYRGIVRDEPDFVAYFRAATPEVELGKLPLGSRPAKRRVDGGIESLR AIPWIFAWSQNRLMLPAWLGAGEALQAASERGEMGLLQDMEREWPFFSTRISMLEMVYAKAEPNLARYYETCLVPKDLHH LGETLRQRLDLGIKVVLELTKSDSLMAHTPWNRESVKLRNPYIDPLNFLQTELLARTRKETTETPASEHVQLALMLTIAG VAAGMRNTG
Sequences:
>Translated_889_residues MVVTKADNMTDMYASLRSNVSMLGQILGDTMRTHLGDSFLEKVEQIRKLAKDSRRGDQAAREQMLELLTALPDEELVPFA KAFNQFLNLANLSEQFHTISRNCDELVCVPDPVEQLLGRMLNGRVDQTKMLDCLKTLDIDLVLTAHPTEISRRTLIQKYA AIVDCLTEQENDQLSDRERQQISLRLRQLIAQIWHTNEIRRERPTPVDEARWGLSTIEESLWHAVPDFLRQLNDQVQQRT GQQLPIDIAPVRFSSWMGGDRDGNPFVTAKVTQEVLDRNRHAAARLFLKDIVLLVGELSMEEANDELKAYTNNSCEPYRH VLRSIRQRLRDTIDYLNARIEGHNPEVDKSSLIWQESDLKAPLEMLYKSLTDCGMRLIANGLLLDILRRLACFGIHMLRL DIRQDASRHSDVLAELTRYLGMGDFNHWDETEKQAFLLRELSNRRPLIPSNWQPSADVAEVLNTCRLIAKHPAKALGSYV ISMAGKPSDVLTVLLLLKETGCSHPMRVVPLFETLSDLNNAAACITDLLDIDWYRGYTKGMQEVMIGYSDSAKDAGVMAA AWAQYHAQEQLVAVCKQAGVKLTLFHGRGGSIGRGGGPAHKAILSQPPGSVDGRIRVTEQGEMIRFKFGLPKLAVQSLAL YTSAVLEATLLPPPEPKQQWRDCMQRIAEESVGAYRGIVRDEPDFVAYFRAATPEVELGKLPLGSRPAKRRVDGGIESLR AIPWIFAWSQNRLMLPAWLGAGEALQAASERGEMGLLQDMEREWPFFSTRISMLEMVYAKAEPNLARYYETCLVPKDLHH LGETLRQRLDLGIKVVLELTKSDSLMAHTPWNRESVKLRNPYIDPLNFLQTELLARTRKETTETPASEHVQLALMLTIAG VAAGMRNTG >Mature_889_residues MVVTKADNMTDMYASLRSNVSMLGQILGDTMRTHLGDSFLEKVEQIRKLAKDSRRGDQAAREQMLELLTALPDEELVPFA KAFNQFLNLANLSEQFHTISRNCDELVCVPDPVEQLLGRMLNGRVDQTKMLDCLKTLDIDLVLTAHPTEISRRTLIQKYA AIVDCLTEQENDQLSDRERQQISLRLRQLIAQIWHTNEIRRERPTPVDEARWGLSTIEESLWHAVPDFLRQLNDQVQQRT GQQLPIDIAPVRFSSWMGGDRDGNPFVTAKVTQEVLDRNRHAAARLFLKDIVLLVGELSMEEANDELKAYTNNSCEPYRH VLRSIRQRLRDTIDYLNARIEGHNPEVDKSSLIWQESDLKAPLEMLYKSLTDCGMRLIANGLLLDILRRLACFGIHMLRL DIRQDASRHSDVLAELTRYLGMGDFNHWDETEKQAFLLRELSNRRPLIPSNWQPSADVAEVLNTCRLIAKHPAKALGSYV ISMAGKPSDVLTVLLLLKETGCSHPMRVVPLFETLSDLNNAAACITDLLDIDWYRGYTKGMQEVMIGYSDSAKDAGVMAA AWAQYHAQEQLVAVCKQAGVKLTLFHGRGGSIGRGGGPAHKAILSQPPGSVDGRIRVTEQGEMIRFKFGLPKLAVQSLAL YTSAVLEATLLPPPEPKQQWRDCMQRIAEESVGAYRGIVRDEPDFVAYFRAATPEVELGKLPLGSRPAKRRVDGGIESLR AIPWIFAWSQNRLMLPAWLGAGEALQAASERGEMGLLQDMEREWPFFSTRISMLEMVYAKAEPNLARYYETCLVPKDLHH LGETLRQRLDLGIKVVLELTKSDSLMAHTPWNRESVKLRNPYIDPLNFLQTELLARTRKETTETPASEHVQLALMLTIAG VAAGMRNTG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=886, Percent_Identity=57.2234762979684, Blast_Score=998, Evalue=0.0,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 100309; Mature: 100309
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVTKADNMTDMYASLRSNVSMLGQILGDTMRTHLGDSFLEKVEQIRKLAKDSRRGDQAA CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHH REQMLELLTALPDEELVPFAKAFNQFLNLANLSEQFHTISRNCDELVCVPDPVEQLLGRM HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHH LNGRVDQTKMLDCLKTLDIDLVLTAHPTEISRRTLIQKYAAIVDCLTEQENDQLSDRERQ HCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QISLRLRQLIAQIWHTNEIRRERPTPVDEARWGLSTIEESLWHAVPDFLRQLNDQVQQRT HHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GQQLPIDIAPVRFSSWMGGDRDGNPFVTAKVTQEVLDRNRHAAARLFLKDIVLLVGELSM CCCCCCEEECCHHHHCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EEANDELKAYTNNSCEPYRHVLRSIRQRLRDTIDYLNARIEGHNPEVDKSSLIWQESDLK HHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCCC APLEMLYKSLTDCGMRLIANGLLLDILRRLACFGIHMLRLDIRQDASRHSDVLAELTRYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMGDFNHWDETEKQAFLLRELSNRRPLIPSNWQPSADVAEVLNTCRLIAKHPAKALGSYV CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHH ISMAGKPSDVLTVLLLLKETGCSHPMRVVPLFETLSDLNNAAACITDLLDIDWYRGYTKG HHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQEVMIGYSDSAKDAGVMAAAWAQYHAQEQLVAVCKQAGVKLTLFHGRGGSIGRGGGPAH HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHH KAILSQPPGSVDGRIRVTEQGEMIRFKFGLPKLAVQSLALYTSAVLEATLLPPPEPKQQW HHHHCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RDCMQRIAEESVGAYRGIVRDEPDFVAYFRAATPEVELGKLPLGSRPAKRRVDGGIESLR HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHH AIPWIFAWSQNRLMLPAWLGAGEALQAASERGEMGLLQDMEREWPFFSTRISMLEMVYAK HHHHHEEECCCCEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH AEPNLARYYETCLVPKDLHHLGETLRQRLDLGIKVVLELTKSDSLMAHTPWNRESVKLRN CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHEECCCCCEEEECCCCCCCEEECC PYIDPLNFLQTELLARTRKETTETPASEHVQLALMLTIAGVAAGMRNTG CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVVTKADNMTDMYASLRSNVSMLGQILGDTMRTHLGDSFLEKVEQIRKLAKDSRRGDQAA CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHH REQMLELLTALPDEELVPFAKAFNQFLNLANLSEQFHTISRNCDELVCVPDPVEQLLGRM HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHH LNGRVDQTKMLDCLKTLDIDLVLTAHPTEISRRTLIQKYAAIVDCLTEQENDQLSDRERQ HCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QISLRLRQLIAQIWHTNEIRRERPTPVDEARWGLSTIEESLWHAVPDFLRQLNDQVQQRT HHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GQQLPIDIAPVRFSSWMGGDRDGNPFVTAKVTQEVLDRNRHAAARLFLKDIVLLVGELSM CCCCCCEEECCHHHHCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EEANDELKAYTNNSCEPYRHVLRSIRQRLRDTIDYLNARIEGHNPEVDKSSLIWQESDLK HHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCCC APLEMLYKSLTDCGMRLIANGLLLDILRRLACFGIHMLRLDIRQDASRHSDVLAELTRYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMGDFNHWDETEKQAFLLRELSNRRPLIPSNWQPSADVAEVLNTCRLIAKHPAKALGSYV CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHH ISMAGKPSDVLTVLLLLKETGCSHPMRVVPLFETLSDLNNAAACITDLLDIDWYRGYTKG HHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQEVMIGYSDSAKDAGVMAAAWAQYHAQEQLVAVCKQAGVKLTLFHGRGGSIGRGGGPAH HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHH KAILSQPPGSVDGRIRVTEQGEMIRFKFGLPKLAVQSLALYTSAVLEATLLPPPEPKQQW HHHHCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RDCMQRIAEESVGAYRGIVRDEPDFVAYFRAATPEVELGKLPLGSRPAKRRVDGGIESLR HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHH AIPWIFAWSQNRLMLPAWLGAGEALQAASERGEMGLLQDMEREWPFFSTRISMLEMVYAK HHHHHEEECCCCEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH AEPNLARYYETCLVPKDLHHLGETLRQRLDLGIKVVLELTKSDSLMAHTPWNRESVKLRN CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHEECCCCCEEEECCCCCCCEEECC PYIDPLNFLQTELLARTRKETTETPASEHVQLALMLTIAGVAAGMRNTG CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]