| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is mrcA [H]
Identifier: 126176304
GI number: 126176304
Start: 4826493
End: 4829027
Strand: Direct
Name: mrcA [H]
Synonym: Sbal_4119
Alternate gene names: 126176304
Gene position: 4826493-4829027 (Clockwise)
Preceding gene: 126176294
Following gene: 126176310
Centisome position: 94.13
GC content: 47.89
Gene sequence:
>2535_bases GTGAAGTGGTTAAAACGTATTGTTATAGCACTATTCAGTCTAGCCCTTTTGGGAGTAGGCGCCATTGTGGCAGCATACTT TTATGTTTTGCCGGATTTGCCGGATGTTTCAACACTAAAAAATGTGCAACTTCAAACACCTTTACGCATCTACAGCAGTG ACGGCAAACTTATTTCACAATTTGGTGAGAAGCGTCGCATTCCATTGAAGTTAGACGAAGTGCCAAAACCCCTACTTCAA GCGTTTATCGCAACTGAAGATGCGCGTTTTTACGAGCATGGTGGTATAGATCCTGTAGGTGTACTTCGCGCCGCATTAGT GATGTTGACCACAGGTGAGAAAAAGCAAGGTGCAAGTACCATTACCATGCAGGTTGCGCGTAACTTCTTCTTAACCCGCG ATAAAACCATTATTCGTAAAGTGAAGGAGATTTTTATCTCCTATCACATTGAAGAATTACTCACCAAAGACGAGATTTTA GAACTCTATGTGAACCGCATTTACTTAGGCCAACGCGCCTATGGTGTTGGTGCCGCTGCACAAGTTTATTTCGGTAAAGA TGTTAAAGACCTTACACTCTCAGAAATGAGTATGATCGCGGGCTTACCCAAAGCGCCTTCGACACTCAACCCTGTGACCT CACCTTCTCGTGCCGTCGCTCGCCGTAATGTCGTCCTCATGCGGATGAATGAAGTAGGTTACATCAGCCAAGCCGAATAC CAAGCCGCACTACAAGAACCGCTGGTCGCTAAATACCACGGCGCCGAAATTGATCTCTATGCGCCTTATATTTCTGAAAT GGCACGAGATTATATGGTGCAAAAGTACGGCGAAGAAGAAGCTTATACCAATGGCTACAACGTCTACACAACCATTTCAT CGGATATACAGCTGAAAGCTCAGCAAGCATTACGTAATAACGTTTATGCCTATGATGAGCGTCATGGCTACCGTGGTCCT GCCGCCGTTCTGTGGACAGATGAAAAACCAGATCAAGCTCAAATCAAGGCTGAACTGGCCAAGGTGGCTTCAATTCAAGA ACTGCAACCCGCAGCAGTCATCAGCGTGGCAGATCAACAAGCCAGTGTCATGACCGCCAAGGGCGAGACTAAAGTCATTA CTTGGGATGGTTTGAAGTGGGCGCGTAAATTTATTACCGATAAACGTCAAGGCAGTGTACCTAAGTCAGCTTCTGACATG CTCAAGGTTGGTGAGCGTATTTGGATCCGTGATAACGGCCAATATTTGCAGTTATCGCAAGTACCAGAAGTTGCCAGCGC GACTGTGTCACTCGACCCACAAAATGGTGCGATTCGTTCTTTAGTCGGCGGATATAGCTTTAGCCAAAGCCAATACAACC GCGTCACTCAAGCAAAACGCCAATTAGGTTCGAACATCAAACCTTTCATCTATGCTGGCGCATTAGAGAAAGGCTTTACC TTAGCGACCCTCATCAACAATGCACCGATCAATAAACCCGATATCAGCCAAGGCACCGCATGGCGCCCTAAAAACTCGCC TGATATCTATGGCGGCCCAACCCGTTTACGTGTGGGCTTAGCGCAATCAATCAACGTGATGTCTGTGCGTGCAATGCGCC ATGTCGGACTCGATGCCACCATTGCTGAATTGATAAAATTTGGTTTCGACCCTAATGACTTACCGCGTAACGAGTCGATT GCATTAGGTTCGTCTTCAGTAACGCCATTACAAGTGGTCACGGCATTTAACGTGTTTGCTAACGGCGGTTTCTTACTCGA ACCTTTCTACATCGATCGCGTCGAAGATGCCTACGGTAATGTGATTGAAAAAGCGAATCCAACATTGGCCTGTAAGCCTA GCCAAAGTCTTAGCCAACCAATTACACCGAGCGATCCTATGGCGTTCAGTGTAACTGGAGACTCTAGTACTGAACCGAGT GCACCTGTTGCCCAGTGTTTCGAGCAAACGGGTCGCTTTGCACCACAGATCATTTCAGAGCAAACTGCATTCCTCATCAC CGAGGCGTTAAAGAGCGTGATCTGGGGTGGCGGTGATTGGAGTCACGGCACTGGCTGGCAAGGTACGGCTTGGCGTGCTG CAAGATTGATTAAACGCCATGATATTGCGGGTAAAACAGGTACAACCAACGAATCTCGCGATACGTGGTTCAGTGGATTT AGCCCTGTGCTCACCAGTACGTTCTGGGTCGGTTTCGACGATCACGGTCGACAACTGGGCAGAACTGCATGGAATGCCAG CGCAGAGAAAGATCAGATAACCGGCGCCGAGGCCGGCGCGAAAACGGCAGGTCCGGGTTGGAACGAGTTTATGAACAGTG TCTTACAAGGCACACCTGAAACCACATCGATTCCACCAGAAGGCATTGTCTCGGTACGGATCGATTTAGCAACGGGTAAA CTCACGCGCAAAACCGACTATACCAGTGCGTTCGAATACTTCATCTCGGGCACTGAGCCGAAGGAATACATCAGCGAAAC TCAGGATGAAAATAACATCTTCATCGATGCGCCAACTGACGACCTATTCCAATAA
Upstream 100 bases:
>100_bases ATTTTACAAACGCTATTTTAGGCTTCTCACGTTTTTACTTCACCAAGAGGTGTACGCCTTATATACTGTCGCACTTAACG GAACATTAGGATAAATTTTG
Downstream 100 bases:
>100_bases ACAACGCATAGAAAGTCATTGCCCATACGGATAATGACCTAATAAAAACGCGACTTAAAGTCGCGTTTTTTATTGGCTTG TTGATTTGAACAACTTGCCT
Product: 1A family penicillin-binding protein
Products: NA
Alternate protein names: PBP-1a; PBP1a; Penicillin-insensitive transglycosylase; Peptidoglycan TGase; Penicillin-sensitive transpeptidase; DD-transpeptidase [H]
Number of amino acids: Translated: 844; Mature: 844
Protein sequence:
>844_residues MKWLKRIVIALFSLALLGVGAIVAAYFYVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQFGEKRRIPLKLDEVPKPLLQ AFIATEDARFYEHGGIDPVGVLRAALVMLTTGEKKQGASTITMQVARNFFLTRDKTIIRKVKEIFISYHIEELLTKDEIL ELYVNRIYLGQRAYGVGAAAQVYFGKDVKDLTLSEMSMIAGLPKAPSTLNPVTSPSRAVARRNVVLMRMNEVGYISQAEY QAALQEPLVAKYHGAEIDLYAPYISEMARDYMVQKYGEEEAYTNGYNVYTTISSDIQLKAQQALRNNVYAYDERHGYRGP AAVLWTDEKPDQAQIKAELAKVASIQELQPAAVISVADQQASVMTAKGETKVITWDGLKWARKFITDKRQGSVPKSASDM LKVGERIWIRDNGQYLQLSQVPEVASATVSLDPQNGAIRSLVGGYSFSQSQYNRVTQAKRQLGSNIKPFIYAGALEKGFT LATLINNAPINKPDISQGTAWRPKNSPDIYGGPTRLRVGLAQSINVMSVRAMRHVGLDATIAELIKFGFDPNDLPRNESI ALGSSSVTPLQVVTAFNVFANGGFLLEPFYIDRVEDAYGNVIEKANPTLACKPSQSLSQPITPSDPMAFSVTGDSSTEPS APVAQCFEQTGRFAPQIISEQTAFLITEALKSVIWGGGDWSHGTGWQGTAWRAARLIKRHDIAGKTGTTNESRDTWFSGF SPVLTSTFWVGFDDHGRQLGRTAWNASAEKDQITGAEAGAKTAGPGWNEFMNSVLQGTPETTSIPPEGIVSVRIDLATGK LTRKTDYTSAFEYFISGTEPKEYISETQDENNIFIDAPTDDLFQ
Sequences:
>Translated_844_residues MKWLKRIVIALFSLALLGVGAIVAAYFYVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQFGEKRRIPLKLDEVPKPLLQ AFIATEDARFYEHGGIDPVGVLRAALVMLTTGEKKQGASTITMQVARNFFLTRDKTIIRKVKEIFISYHIEELLTKDEIL ELYVNRIYLGQRAYGVGAAAQVYFGKDVKDLTLSEMSMIAGLPKAPSTLNPVTSPSRAVARRNVVLMRMNEVGYISQAEY QAALQEPLVAKYHGAEIDLYAPYISEMARDYMVQKYGEEEAYTNGYNVYTTISSDIQLKAQQALRNNVYAYDERHGYRGP AAVLWTDEKPDQAQIKAELAKVASIQELQPAAVISVADQQASVMTAKGETKVITWDGLKWARKFITDKRQGSVPKSASDM LKVGERIWIRDNGQYLQLSQVPEVASATVSLDPQNGAIRSLVGGYSFSQSQYNRVTQAKRQLGSNIKPFIYAGALEKGFT LATLINNAPINKPDISQGTAWRPKNSPDIYGGPTRLRVGLAQSINVMSVRAMRHVGLDATIAELIKFGFDPNDLPRNESI ALGSSSVTPLQVVTAFNVFANGGFLLEPFYIDRVEDAYGNVIEKANPTLACKPSQSLSQPITPSDPMAFSVTGDSSTEPS APVAQCFEQTGRFAPQIISEQTAFLITEALKSVIWGGGDWSHGTGWQGTAWRAARLIKRHDIAGKTGTTNESRDTWFSGF SPVLTSTFWVGFDDHGRQLGRTAWNASAEKDQITGAEAGAKTAGPGWNEFMNSVLQGTPETTSIPPEGIVSVRIDLATGK LTRKTDYTSAFEYFISGTEPKEYISETQDENNIFIDAPTDDLFQ >Mature_844_residues MKWLKRIVIALFSLALLGVGAIVAAYFYVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQFGEKRRIPLKLDEVPKPLLQ AFIATEDARFYEHGGIDPVGVLRAALVMLTTGEKKQGASTITMQVARNFFLTRDKTIIRKVKEIFISYHIEELLTKDEIL ELYVNRIYLGQRAYGVGAAAQVYFGKDVKDLTLSEMSMIAGLPKAPSTLNPVTSPSRAVARRNVVLMRMNEVGYISQAEY QAALQEPLVAKYHGAEIDLYAPYISEMARDYMVQKYGEEEAYTNGYNVYTTISSDIQLKAQQALRNNVYAYDERHGYRGP AAVLWTDEKPDQAQIKAELAKVASIQELQPAAVISVADQQASVMTAKGETKVITWDGLKWARKFITDKRQGSVPKSASDM LKVGERIWIRDNGQYLQLSQVPEVASATVSLDPQNGAIRSLVGGYSFSQSQYNRVTQAKRQLGSNIKPFIYAGALEKGFT LATLINNAPINKPDISQGTAWRPKNSPDIYGGPTRLRVGLAQSINVMSVRAMRHVGLDATIAELIKFGFDPNDLPRNESI ALGSSSVTPLQVVTAFNVFANGGFLLEPFYIDRVEDAYGNVIEKANPTLACKPSQSLSQPITPSDPMAFSVTGDSSTEPS APVAQCFEQTGRFAPQIISEQTAFLITEALKSVIWGGGDWSHGTGWQGTAWRAARLIKRHDIAGKTGTTNESRDTWFSGF SPVLTSTFWVGFDDHGRQLGRTAWNASAEKDQITGAEAGAKTAGPGWNEFMNSVLQGTPETTSIPPEGIVSVRIDLATGK LTRKTDYTSAFEYFISGTEPKEYISETQDENNIFIDAPTDDLFQ
Specific function: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal
COG id: COG5009
COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI87082258, Length=843, Percent_Identity=51.1269276393832, Blast_Score=850, Evalue=0.0, Organism=Escherichia coli, GI1788867, Length=260, Percent_Identity=33.8461538461538, Blast_Score=133, Evalue=5e-32, Organism=Escherichia coli, GI1786343, Length=275, Percent_Identity=31.6363636363636, Blast_Score=132, Evalue=9e-32, Organism=Escherichia coli, GI1789601, Length=166, Percent_Identity=34.3373493975904, Blast_Score=87, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.2.-; 3.4.-.-
Molecular weight: Translated: 92915; Mature: 92915
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWLKRIVIALFSLALLGVGAIVAAYFYVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEECCCEEEECCCCHHHHH FGEKRRIPLKLDEVPKPLLQAFIATEDARFYEHGGIDPVGVLRAALVMLTTGEKKQGAST HHHCCCCCEEHHHCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHH ITMQVARNFFLTRDKTIIRKVKEIFISYHIEELLTKDEILELYVNRIYLGQRAYGVGAAA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEE QVYFGKDVKDLTLSEMSMIAGLPKAPSTLNPVTSPSRAVARRNVVLMRMNEVGYISQAEY EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCHHHHH QAALQEPLVAKYHGAEIDLYAPYISEMARDYMVQKYGEEEAYTNGYNVYTTISSDIQLKA HHHHHCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCHHCCCCCEEEEEECCCHHHHH QQALRNNVYAYDERHGYRGPAAVLWTDEKPDQAQIKAELAKVASIQELQPAAVISVADQQ HHHHHCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCC ASVMTAKGETKVITWDGLKWARKFITDKRQGSVPKSASDMLKVGERIWIRDNGQYLQLSQ CCEEEECCCEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCCEEEECC VPEVASATVSLDPQNGAIRSLVGGYSFSQSQYNRVTQAKRQLGSNIKPFIYAGALEKGFT CCCHHHCEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCE LATLINNAPINKPDISQGTAWRPKNSPDIYGGPTRLRVGLAQSINVMSVRAMRHVGLDAT EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEHHHCCHHHHHHHHHHCCCCHH IAELIKFGFDPNDLPRNESIALGSSSVTPLQVVTAFNVFANGGFLLEPFYIDRVEDAYGN HHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH VIEKANPTLACKPSQSLSQPITPSDPMAFSVTGDSSTEPSAPVAQCFEQTGRFAPQIISE HHHHCCCCEEECCCHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHH QTAFLITEALKSVIWGGGDWSHGTGWQGTAWRAARLIKRHDIAGKTGTTNESRDTWFSGF HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCC SPVLTSTFWVGFDDHGRQLGRTAWNASAEKDQITGAEAGAKTAGPGWNEFMNSVLQGTPE CHHHHHHEEECCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC TTSIPPEGIVSVRIDLATGKLTRKTDYTSAFEYFISGTEPKEYISETQDENNIFIDAPTD CCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCH DLFQ HHCC >Mature Secondary Structure MKWLKRIVIALFSLALLGVGAIVAAYFYVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEECCCEEEECCCCHHHHH FGEKRRIPLKLDEVPKPLLQAFIATEDARFYEHGGIDPVGVLRAALVMLTTGEKKQGAST HHHCCCCCEEHHHCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHH ITMQVARNFFLTRDKTIIRKVKEIFISYHIEELLTKDEILELYVNRIYLGQRAYGVGAAA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEE QVYFGKDVKDLTLSEMSMIAGLPKAPSTLNPVTSPSRAVARRNVVLMRMNEVGYISQAEY EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCHHHHH QAALQEPLVAKYHGAEIDLYAPYISEMARDYMVQKYGEEEAYTNGYNVYTTISSDIQLKA HHHHHCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCHHCCCCCEEEEEECCCHHHHH QQALRNNVYAYDERHGYRGPAAVLWTDEKPDQAQIKAELAKVASIQELQPAAVISVADQQ HHHHHCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCC ASVMTAKGETKVITWDGLKWARKFITDKRQGSVPKSASDMLKVGERIWIRDNGQYLQLSQ CCEEEECCCEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCCEEEECC VPEVASATVSLDPQNGAIRSLVGGYSFSQSQYNRVTQAKRQLGSNIKPFIYAGALEKGFT CCCHHHCEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCE LATLINNAPINKPDISQGTAWRPKNSPDIYGGPTRLRVGLAQSINVMSVRAMRHVGLDAT EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEHHHCCHHHHHHHHHHCCCCHH IAELIKFGFDPNDLPRNESIALGSSSVTPLQVVTAFNVFANGGFLLEPFYIDRVEDAYGN HHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH VIEKANPTLACKPSQSLSQPITPSDPMAFSVTGDSSTEPSAPVAQCFEQTGRFAPQIISE HHHHCCCCEEECCCHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHH QTAFLITEALKSVIWGGGDWSHGTGWQGTAWRAARLIKRHDIAGKTGTTNESRDTWFSGF HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCC SPVLTSTFWVGFDDHGRQLGRTAWNASAEKDQITGAEAGAKTAGPGWNEFMNSVLQGTPE CHHHHHHEEECCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC TTSIPPEGIVSVRIDLATGKLTRKTDYTSAFEYFISGTEPKEYISETQDENNIFIDAPTD CCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCH DLFQ HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]