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The map label for this gene is yraM [C]

Identifier: 126176284

GI number: 126176284

Start: 4808476

End: 4810380

Strand: Direct

Name: yraM [C]

Synonym: Sbal_4099

Alternate gene names: 126176284

Gene position: 4808476-4810380 (Clockwise)

Preceding gene: 126176279

Following gene: 126176285

Centisome position: 93.78

GC content: 49.29

Gene sequence:

>1905_bases
GTGTTAAAAAGCCTGAATACAACTAAGTTCGTTTCCGTGGCCATTTTATCGGTAATCTTGGCGGGTTGTGGTGTTTCATC
GCCCAATTCCACTGGAACAACCGCCACATTGGCTACCTCATTAGCATCCGCACCTTTGGCGGCAAATGTCTATTTGGCGC
AAGCGGCCAATAGTAAAGATCCGCAGCAGCGCGATACTAATCTGCTGCTAGCAGCCCATGCCTATATCAATGCCAATGAT
TACGCTGCGGCGCAGAAGCTACTCAAATCGATACTGCCGAGCTTAACTCAGAGCCCAACATTACTGGCCGAATATAAATA
CTTAACTGCACGTGTGCTTGAACACACGTCCACCTACAGTGATGCCCTTAAAACCTTAAATTATCCAAGTAATTGGAGCC
TGCCAAGCTGGCAGATGACGGCCTATCACCAGTTCAAAGCGCATTTATATCAATTGAATAAACAGCCAATTGAACAAGTA
CGCGAGTTGAGTTTACTGACAACTTACTTGCCAGCCGCCCAAGCCAAAGAAGTGAATAACACCATTTGGCAAGTGCTGCA
GCCGATGCACGAACAAACTATAAAGACGTTTACCCAAGATGCTAAAAGTCCAGTGTTTGCAGGCTGGTTACAACTGGCTT
ATATCGCTAAGCATTATGCCGTCGATCCCACCCAGTTAGTGCGCTACTTAGGTGAATGGCAAAAGCAGAACCCTTATCAC
CCAGCTGCGGCAAAATTGCCTGCCGATTTAGACAGAGCCCTCAACGCTAAGCCTTTTACACCGAAAAACATTGCCGTGCT
GTTGCCGCTGACGGGCCCACGAGCGAACGCCGCCAATGCGATTCGCCAAGGCATATTAGCCAGCTATATGGCGAAGCAAA
ACGATAAAGTCGCAGTGAATTTTTACGATACGGCCAACGATGCGGCGAGTGCCTATCAACAGGCGCTGATGGCGGGAGCC
GAGTTTATTATTGGCCCATTACTGCCGACTGAAATCGAACAACTACAAGTGATGAATGCGGCAAATACTGCCGCCACTAA
TGCGGTGGCCAATGCTGCCAACCCAGACAAAACGGCCAATACGGTTGCAGCGGCTCCTGCGGTGCCTGTACCACAACTCT
TTTTGAATCAAGTTGATAAGTTCACCCCCGATCCAAACAAATTCTACTTTGCGCTATCGCCAGCCCAAGAAGCAGCCGAT
GCCGCCGAGCATTTATATCAAGATGGCGTCACTATGCCATTGCTGCTCGCCAGCAATGATGCCCTTGGCAAACGTATGGC
CGAGAGCTTTATTCAAGCGTGGAAAAAGAAGAGCGATAACGTCGTCGAAGTCTATTACTACGATGGCGGCGACCAAATGA
AAACCACAGTGCAAGATGCCCTTGGCGTGCGTGATAGCCAAGCCCGTATCGCACGCATCAAGGAGCTGCTGGGTAACTCA
GTGCAGGCTGACTTCCGCTCACGCCAAGATATTGATGCCATTTATATGATTTCAACGCCGCAGGATCTGACTCTGCTCAA
GGCCTTTATCGACGTTAACTTCAGCGTGTTCACTCAACCTGTGCCCCTGTATACCTCAAGCCGCAGCCGAGTTGAGAACG
AGAGCACACAAACTGCGCAGGATTTAAATAACCTCACCCTCAGCGATGCCCCTTGGCTGATGCAAAACGGCGAAGAAAAC
CTAATGGTTAACACACTATTTTCGGGCTGGAATAACAGTCAGAAACGTTTGTTTGTTATGGGTTATGATGCGATGGACTT
GATCGGCCGTTTAGCACAAATGCGCTCATTTACGGGTTACCAATTCAATGGCCGCAGCGGCGCTTTATCGGTTAACCCAG
ATGGCATAGTAAACCGCCAATTAAGCTGGGGACGTTACCAAAGAGGCAGCTTCCGCCAGCTATGA

Upstream 100 bases:

>100_bases
GCTTTGGTCCATATATACCTCTGTAATGACAGTGCCAAGACTTTCGTCAAGCGCGAGAGAAGGTTAAACTAGAGGCCGCA
TCTTACCAGAGTGAAGCCCA

Downstream 100 bases:

>100_bases
CACTCGGACAGCAGGCAGAAGCGCACGCACAACGTTACCTTGAACAGCAAGGGTTAACTTTTGTCGAACGTAATGTCCGC
TATCCGTTTGGGGAAATTGA

Product: LppC family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MLKSLNTTKFVSVAILSVILAGCGVSSPNSTGTTATLATSLASAPLAANVYLAQAANSKDPQQRDTNLLLAAHAYINAND
YAAAQKLLKSILPSLTQSPTLLAEYKYLTARVLEHTSTYSDALKTLNYPSNWSLPSWQMTAYHQFKAHLYQLNKQPIEQV
RELSLLTTYLPAAQAKEVNNTIWQVLQPMHEQTIKTFTQDAKSPVFAGWLQLAYIAKHYAVDPTQLVRYLGEWQKQNPYH
PAAAKLPADLDRALNAKPFTPKNIAVLLPLTGPRANAANAIRQGILASYMAKQNDKVAVNFYDTANDAASAYQQALMAGA
EFIIGPLLPTEIEQLQVMNAANTAATNAVANAANPDKTANTVAAAPAVPVPQLFLNQVDKFTPDPNKFYFALSPAQEAAD
AAEHLYQDGVTMPLLLASNDALGKRMAESFIQAWKKKSDNVVEVYYYDGGDQMKTTVQDALGVRDSQARIARIKELLGNS
VQADFRSRQDIDAIYMISTPQDLTLLKAFIDVNFSVFTQPVPLYTSSRSRVENESTQTAQDLNNLTLSDAPWLMQNGEEN
LMVNTLFSGWNNSQKRLFVMGYDAMDLIGRLAQMRSFTGYQFNGRSGALSVNPDGIVNRQLSWGRYQRGSFRQL

Sequences:

>Translated_634_residues
MLKSLNTTKFVSVAILSVILAGCGVSSPNSTGTTATLATSLASAPLAANVYLAQAANSKDPQQRDTNLLLAAHAYINAND
YAAAQKLLKSILPSLTQSPTLLAEYKYLTARVLEHTSTYSDALKTLNYPSNWSLPSWQMTAYHQFKAHLYQLNKQPIEQV
RELSLLTTYLPAAQAKEVNNTIWQVLQPMHEQTIKTFTQDAKSPVFAGWLQLAYIAKHYAVDPTQLVRYLGEWQKQNPYH
PAAAKLPADLDRALNAKPFTPKNIAVLLPLTGPRANAANAIRQGILASYMAKQNDKVAVNFYDTANDAASAYQQALMAGA
EFIIGPLLPTEIEQLQVMNAANTAATNAVANAANPDKTANTVAAAPAVPVPQLFLNQVDKFTPDPNKFYFALSPAQEAAD
AAEHLYQDGVTMPLLLASNDALGKRMAESFIQAWKKKSDNVVEVYYYDGGDQMKTTVQDALGVRDSQARIARIKELLGNS
VQADFRSRQDIDAIYMISTPQDLTLLKAFIDVNFSVFTQPVPLYTSSRSRVENESTQTAQDLNNLTLSDAPWLMQNGEEN
LMVNTLFSGWNNSQKRLFVMGYDAMDLIGRLAQMRSFTGYQFNGRSGALSVNPDGIVNRQLSWGRYQRGSFRQL
>Mature_634_residues
MLKSLNTTKFVSVAILSVILAGCGVSSPNSTGTTATLATSLASAPLAANVYLAQAANSKDPQQRDTNLLLAAHAYINAND
YAAAQKLLKSILPSLTQSPTLLAEYKYLTARVLEHTSTYSDALKTLNYPSNWSLPSWQMTAYHQFKAHLYQLNKQPIEQV
RELSLLTTYLPAAQAKEVNNTIWQVLQPMHEQTIKTFTQDAKSPVFAGWLQLAYIAKHYAVDPTQLVRYLGEWQKQNPYH
PAAAKLPADLDRALNAKPFTPKNIAVLLPLTGPRANAANAIRQGILASYMAKQNDKVAVNFYDTANDAASAYQQALMAGA
EFIIGPLLPTEIEQLQVMNAANTAATNAVANAANPDKTANTVAAAPAVPVPQLFLNQVDKFTPDPNKFYFALSPAQEAAD
AAEHLYQDGVTMPLLLASNDALGKRMAESFIQAWKKKSDNVVEVYYYDGGDQMKTTVQDALGVRDSQARIARIKELLGNS
VQADFRSRQDIDAIYMISTPQDLTLLKAFIDVNFSVFTQPVPLYTSSRSRVENESTQTAQDLNNLTLSDAPWLMQNGEEN
LMVNTLFSGWNNSQKRLFVMGYDAMDLIGRLAQMRSFTGYQFNGRSGALSVNPDGIVNRQLSWGRYQRGSFRQL

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yraM [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=359, Percent_Identity=28.133704735376, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 69785; Mature: 69785

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSLNTTKFVSVAILSVILAGCGVSSPNSTGTTATLATSLASAPLAANVYLAQAANSKD
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEEECCCCCC
PQQRDTNLLLAAHAYINANDYAAAQKLLKSILPSLTQSPTLLAEYKYLTARVLEHTSTYS
CCHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DALKTLNYPSNWSLPSWQMTAYHQFKAHLYQLNKQPIEQVRELSLLTTYLPAAQAKEVNN
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHH
TIWQVLQPMHEQTIKTFTQDAKSPVFAGWLQLAYIAKHYAVDPTQLVRYLGEWQKQNPYH
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
PAAAKLPADLDRALNAKPFTPKNIAVLLPLTGPRANAANAIRQGILASYMAKQNDKVAVN
CHHHCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
FYDTANDAASAYQQALMAGAEFIIGPLLPTEIEQLQVMNAANTAATNAVANAANPDKTAN
EECCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TVAAAPAVPVPQLFLNQVDKFTPDPNKFYFALSPAQEAADAAEHLYQDGVTMPLLLASND
CEECCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCH
ALGKRMAESFIQAWKKKSDNVVEVYYYDGGDQMKTTVQDALGVRDSQARIARIKELLGNS
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
VQADFRSRQDIDAIYMISTPQDLTLLKAFIDVNFSVFTQPVPLYTSSRSRVENESTQTAQ
HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHCCCHHHHHH
DLNNLTLSDAPWLMQNGEENLMVNTLFSGWNNSQKRLFVMGYDAMDLIGRLAQMRSFTGY
HHHCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCE
QFNGRSGALSVNPDGIVNRQLSWGRYQRGSFRQL
EECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKSLNTTKFVSVAILSVILAGCGVSSPNSTGTTATLATSLASAPLAANVYLAQAANSKD
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEEECCCCCC
PQQRDTNLLLAAHAYINANDYAAAQKLLKSILPSLTQSPTLLAEYKYLTARVLEHTSTYS
CCHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DALKTLNYPSNWSLPSWQMTAYHQFKAHLYQLNKQPIEQVRELSLLTTYLPAAQAKEVNN
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHH
TIWQVLQPMHEQTIKTFTQDAKSPVFAGWLQLAYIAKHYAVDPTQLVRYLGEWQKQNPYH
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
PAAAKLPADLDRALNAKPFTPKNIAVLLPLTGPRANAANAIRQGILASYMAKQNDKVAVN
CHHHCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
FYDTANDAASAYQQALMAGAEFIIGPLLPTEIEQLQVMNAANTAATNAVANAANPDKTAN
EECCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TVAAAPAVPVPQLFLNQVDKFTPDPNKFYFALSPAQEAADAAEHLYQDGVTMPLLLASND
CEECCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCH
ALGKRMAESFIQAWKKKSDNVVEVYYYDGGDQMKTTVQDALGVRDSQARIARIKELLGNS
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
VQADFRSRQDIDAIYMISTPQDLTLLKAFIDVNFSVFTQPVPLYTSSRSRVENESTQTAQ
HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHCCCHHHHHH
DLNNLTLSDAPWLMQNGEENLMVNTLFSGWNNSQKRLFVMGYDAMDLIGRLAQMRSFTGY
HHHCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCE
QFNGRSGALSVNPDGIVNRQLSWGRYQRGSFRQL
EECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]