| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126176279
Identifier: 126176279
GI number: 126176279
Start: 4803905
End: 4805551
Strand: Direct
Name: 126176279
Synonym: Sbal_4093
Alternate gene names: NA
Gene position: 4803905-4805551 (Clockwise)
Preceding gene: 126176278
Following gene: 126176284
Centisome position: 93.69
GC content: 47.36
Gene sequence:
>1647_bases ATGCAGAAATTCATTCAGTATGCATGCATCCTACCTTGTTGTGTTGGCAGCCTAATCAGTGCTGCCCAAGCAGAAGACGC TAAGCTCGCCGATCCCGCAACACAGGCTCAAGCAACCAAAAAAGTCAGCAAGATCGTCGTAGTTAACAATCCTATTTTTG ATGAATCCGATCCCGATGCTTTTTTCATCCACCGCTGGGCGAACGCTTTACACATCAACACCAAAGAATATGTGGTGCTC GATAAACTGACCTTCGGCGAAAATGATACTGTCGCCCAGAAAGACCTCGACGAATCGCAACGGCTATTACGGGCGGTGCC CTATATCCGCGACGCCAAAATTTATGTCGCCGAAAAAGATCCCCTAGCCGATACCGATCCCACGGTTGAGTCCGTTATCG TCGAAACCTGGGATAACTGGTCATTATTGCCCACTGCGAGCCTGAGCAGTTCAGGTGGCGACACTCGTTATTCTTTTGGT GTTAAAGAAGACAACTTACTCGGAACAGGTATCCGCACTCGACTCAAGTACCAGTCCAACGAATCCCGTAATGGTTACAA ATTTGCGTTCGAAGCTCCGCTGAGCATTATCGAACACGGCACGGTTGCCGCCGAGTTTTACGACAATAGCGACGGCCAAG CTAAGCACGTTTATGTCAGTAAGCCTTTCTATTCTCTCGATACCAATACCATGTATTCGGCGGAGTTTTTAGACGAAAAC CGTATTGATACCCTGAGGAAAAATGGGCAAGAGATAAATGAATTCGAACACACAGTCGACTACCTTAATCTGCAATATGG CTGGTTAATTAATAAGAACAGTGAGCATCTTTCTCGCTTTATTACCGGTGTTACCCAAGATAAACACGAGTTTGCCAATT CAGAGCTCTACCCTAATTCGATGCTGCCTCAAGACAGGGATTTTATGTACCCTTGGGTCGCCTACGAGTTTATCCAAGAT GATTTCCATGTACTGAATAACGTTCACCTGATCACCAACAACGAAGACTTTAACTTAGGCTGGCATCACTATGTGCAACT CGGCATAGAAACCAATGACATAGGCGATAACAATCCTGTCGGCTACCACGTCAATTGGCAAAGTACTGGCGGCTATAAGT TTGACGACCAACTGTGGCTGTTAGAAATGGGCGGCACTAGCACAATAGGTACAACCCAAAAAGACACTTACAAGGTCGAT GTACAAGCCGAGTACTTTTATCAAATCAATCCTAAGTGGACAGCCTACGGCAAAGCATGGGCCAGCCTTTCACAGAACAC TTATCTGGATCTGACCAAAGGGCTGGGAGATGAAACTGGCGTGCGCGGTTATCCAAACGAATACCAACAAGGGGACAATC AGTGGTTATTGACCGCCGAGATACGTAATTACCCCAACATCAACTTATACCAATTGGCTGAATTGGGCTGGGCCGTCTTT ACTGATTTGGGTCAAGCTTCCGGCGGCCAGTTTGCCGAGAATAATGAAGTCAGCGGTCCACTGGGCAGCATAGGCATAGG CGCGCGGATTTATTCCTCTCGCTCCAGCTATGGCAACGTCGCCCATATCGATTTTTCGATTCCTTACACGGGCGGCGAGT CAGTGAACAGTTGGGAATGGCGATTCCTAGTGAAACGCAGTTTTTAG
Upstream 100 bases:
>100_bases TTTTCTTGACTAACACCCGCTTTCCATGTGTTATTAAATTGTGAATTGCAGAGTGAAATTGTTTTCGCTGCAGTCGTCAA TTTCATGGGAGTGGCCTTTT
Downstream 100 bases:
>100_bases CAGCTGATTTACGAATTGCGAATAAGGTAGGGTGCTGAGTTGAAGCGCATTGTTAAGATGTTGATCTACAAAGTCATGCC GTTTAGCCCTACAAAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MQKFIQYACILPCCVGSLISAAQAEDAKLADPATQAQATKKVSKIVVVNNPIFDESDPDAFFIHRWANALHINTKEYVVL DKLTFGENDTVAQKDLDESQRLLRAVPYIRDAKIYVAEKDPLADTDPTVESVIVETWDNWSLLPTASLSSSGGDTRYSFG VKEDNLLGTGIRTRLKYQSNESRNGYKFAFEAPLSIIEHGTVAAEFYDNSDGQAKHVYVSKPFYSLDTNTMYSAEFLDEN RIDTLRKNGQEINEFEHTVDYLNLQYGWLINKNSEHLSRFITGVTQDKHEFANSELYPNSMLPQDRDFMYPWVAYEFIQD DFHVLNNVHLITNNEDFNLGWHHYVQLGIETNDIGDNNPVGYHVNWQSTGGYKFDDQLWLLEMGGTSTIGTTQKDTYKVD VQAEYFYQINPKWTAYGKAWASLSQNTYLDLTKGLGDETGVRGYPNEYQQGDNQWLLTAEIRNYPNINLYQLAELGWAVF TDLGQASGGQFAENNEVSGPLGSIGIGARIYSSRSSYGNVAHIDFSIPYTGGESVNSWEWRFLVKRSF
Sequences:
>Translated_548_residues MQKFIQYACILPCCVGSLISAAQAEDAKLADPATQAQATKKVSKIVVVNNPIFDESDPDAFFIHRWANALHINTKEYVVL DKLTFGENDTVAQKDLDESQRLLRAVPYIRDAKIYVAEKDPLADTDPTVESVIVETWDNWSLLPTASLSSSGGDTRYSFG VKEDNLLGTGIRTRLKYQSNESRNGYKFAFEAPLSIIEHGTVAAEFYDNSDGQAKHVYVSKPFYSLDTNTMYSAEFLDEN RIDTLRKNGQEINEFEHTVDYLNLQYGWLINKNSEHLSRFITGVTQDKHEFANSELYPNSMLPQDRDFMYPWVAYEFIQD DFHVLNNVHLITNNEDFNLGWHHYVQLGIETNDIGDNNPVGYHVNWQSTGGYKFDDQLWLLEMGGTSTIGTTQKDTYKVD VQAEYFYQINPKWTAYGKAWASLSQNTYLDLTKGLGDETGVRGYPNEYQQGDNQWLLTAEIRNYPNINLYQLAELGWAVF TDLGQASGGQFAENNEVSGPLGSIGIGARIYSSRSSYGNVAHIDFSIPYTGGESVNSWEWRFLVKRSF >Mature_548_residues MQKFIQYACILPCCVGSLISAAQAEDAKLADPATQAQATKKVSKIVVVNNPIFDESDPDAFFIHRWANALHINTKEYVVL DKLTFGENDTVAQKDLDESQRLLRAVPYIRDAKIYVAEKDPLADTDPTVESVIVETWDNWSLLPTASLSSSGGDTRYSFG VKEDNLLGTGIRTRLKYQSNESRNGYKFAFEAPLSIIEHGTVAAEFYDNSDGQAKHVYVSKPFYSLDTNTMYSAEFLDEN RIDTLRKNGQEINEFEHTVDYLNLQYGWLINKNSEHLSRFITGVTQDKHEFANSELYPNSMLPQDRDFMYPWVAYEFIQD DFHVLNNVHLITNNEDFNLGWHHYVQLGIETNDIGDNNPVGYHVNWQSTGGYKFDDQLWLLEMGGTSTIGTTQKDTYKVD VQAEYFYQINPKWTAYGKAWASLSQNTYLDLTKGLGDETGVRGYPNEYQQGDNQWLLTAEIRNYPNINLYQLAELGWAVF TDLGQASGGQFAENNEVSGPLGSIGIGARIYSSRSSYGNVAHIDFSIPYTGGESVNSWEWRFLVKRSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62120; Mature: 62120
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKFIQYACILPCCVGSLISAAQAEDAKLADPATQAQATKKVSKIVVVNNPIFDESDPDA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCE FFIHRWANALHINTKEYVVLDKLTFGENDTVAQKDLDESQRLLRAVPYIRDAKIYVAEKD EEEEECCCEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEECCEEEEECCC PLADTDPTVESVIVETWDNWSLLPTASLSSSGGDTRYSFGVKEDNLLGTGIRTRLKYQSN CCCCCCCCHHHHEEEECCCCEEEEECCCCCCCCCCEEEECCCCCCEECCCCEEEEEECCC ESRNGYKFAFEAPLSIIEHGTVAAEFYDNSDGQAKHVYVSKPFYSLDTNTMYSAEFLDEN CCCCCEEEEEECCHHHHCCCCEEEEEEECCCCCEEEEEEECCEEECCCCCEEEHHHCCCC RIDTLRKNGQEINEFEHTVDYLNLQYGWLINKNSEHLSRFITGVTQDKHEFANSELYPNS HHHHHHHCCCHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHCCCCCHHHHCCCCCCCCC MLPQDRDFMYPWVAYEFIQDDFHVLNNVHLITNNEDFNLGWHHYVQLGIETNDIGDNNPV CCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCE GYHVNWQSTGGYKFDDQLWLLEMGGTSTIGTTQKDTYKVDVQAEYFYQINPKWTAYGKAW EEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEECCCEEECCHHH ASLSQNTYLDLTKGLGDETGVRGYPNEYQQGDNQWLLTAEIRNYPNINLYQLAELGWAVF HHCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH TDLGQASGGQFAENNEVSGPLGSIGIGARIYSSRSSYGNVAHIDFSIPYTGGESVNSWEW HHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEE RFLVKRSF EEEEEECC >Mature Secondary Structure MQKFIQYACILPCCVGSLISAAQAEDAKLADPATQAQATKKVSKIVVVNNPIFDESDPDA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCE FFIHRWANALHINTKEYVVLDKLTFGENDTVAQKDLDESQRLLRAVPYIRDAKIYVAEKD EEEEECCCEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEECCEEEEECCC PLADTDPTVESVIVETWDNWSLLPTASLSSSGGDTRYSFGVKEDNLLGTGIRTRLKYQSN CCCCCCCCHHHHEEEECCCCEEEEECCCCCCCCCCEEEECCCCCCEECCCCEEEEEECCC ESRNGYKFAFEAPLSIIEHGTVAAEFYDNSDGQAKHVYVSKPFYSLDTNTMYSAEFLDEN CCCCCEEEEEECCHHHHCCCCEEEEEEECCCCCEEEEEEECCEEECCCCCEEEHHHCCCC RIDTLRKNGQEINEFEHTVDYLNLQYGWLINKNSEHLSRFITGVTQDKHEFANSELYPNS HHHHHHHCCCHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHCCCCCHHHHCCCCCCCCC MLPQDRDFMYPWVAYEFIQDDFHVLNNVHLITNNEDFNLGWHHYVQLGIETNDIGDNNPV CCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCE GYHVNWQSTGGYKFDDQLWLLEMGGTSTIGTTQKDTYKVDVQAEYFYQINPKWTAYGKAW EEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEECCCEEECCHHH ASLSQNTYLDLTKGLGDETGVRGYPNEYQQGDNQWLLTAEIRNYPNINLYQLAELGWAVF HHCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH TDLGQASGGQFAENNEVSGPLGSIGIGARIYSSRSSYGNVAHIDFSIPYTGGESVNSWEW HHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEE RFLVKRSF EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA