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The map label for this gene is ytfL [H]

Identifier: 126176220

GI number: 126176220

Start: 4736369

End: 4737685

Strand: Reverse

Name: ytfL [H]

Synonym: Sbal_4034

Alternate gene names: 126176220

Gene position: 4737685-4736369 (Counterclockwise)

Preceding gene: 126176222

Following gene: 126176218

Centisome position: 92.4

GC content: 46.85

Gene sequence:

>1317_bases
ATGAGTCTGTTTGATAACGTGATGATTATTTTGTGCCTAATCGGCGCGAGTTGTTTCTTCTCTATGTCAGAAATTGCACT
TGCCGCTTCACGTAAAATCCGTTTACGTCAGTTGGCCGATGAGGGCGATGCCCGTGCAGAAAAAGTGCTGCAGTTACAAG
CCGTTCCCGGCAGTTTTTTTACTGTGGTACAAATCGGTCTTAATGCCGTTGCCATCATGGGCGGTATCGTCGGTGAGTCG
GCATTTCGGCCTTATTTCTATGAATTACTGTCGCCTTTGCTGACCGATCCTTGGTTGAGCCAAATGAGCTTTGTTTTATC
CTTTATTGTCGTCACCAGTGCCTTTATTCTGGTGGCTGATTTGATGCCAAAACGCATTGCCATGGCTATGCCAGAGCCCG
TCGCGTTGGCCGTTGTTGGGCCTATGTCTTTCTGTATCGTGCTACTGCGTCCATTAGTGTGGTTTTTCAATGGCATGGCG
AGCGGCATCTTTAAACTGCTGCAAATCCCAACCGTGCGTAACGATGCCATCACCTCTGACGACATTTATGCCGTGATGAA
CGCGGGCGCCGAAGCAGGGGTATTAGATCGCGGTGATCAACAGATGATGGAAAATGTGTTTGAAATGCAAACCGTTTCTG
TGACTTCGGCCATGACGGCTCGTGAAAGCTTAGTGTACTTTTTACTGCAAGATAGCGAAGAAGATATCAAGCGTAAGATT
TCTGAAGATCCCCACACTAAGTTCCTCGTCTGCGATGGTCAGTTAGATATGATCAAAGGTTTTGTGGATGCAAAAGAGCT
GCTGATCCGAGTGATTAACGGTGAGAATATTACTCTAAAAGGCAGTAACTTAGTCCACACTTCGCTGATCATTCCTGATA
CTTTGAGCCTATCAGAGGCTATGGAATACTTTAAGAATAGCCGCGCCGATTTTGCCGTGGTTATGAACGAATATGCGTTA
GTGGTCGGGATTGTTACGACCAACGATCTACAGCGCGCGGTAATGGGTGCTTGGTCATTGCACGAGAGCGAAGAGCAGAT
CATCGCCCGTGATAGCAACTCTTGGTTAGTAGATGGGGTAACACCGATTACTGACGTGATGCGCGCCTTCGGCATCGAAG
AATTCCCGCATAATCAGAACTACGAAACCATTGCTGGTTTTATGATGTATATGCTGCGTAAAATCCCTAAGCGTACCGAT
TTCGTCAACTATGCGGGCTATAAATTTGAGGTGGTCGATATCGATTCTTACAAGGTCGATCAGTTGTTGGTGACCCGTAT
CGATCCTATCGATAAGCTCAACTCACCGGATGTGTAA

Upstream 100 bases:

>100_bases
AAACTTGGCATTCGGCATGAGAATATTTTATTCAGCTGACACGCGAGCAATAAAGCGCGGGTTGGTCCTAGTTAGTCCAG
TGTTAAATGAAAGGTGTTAC

Downstream 100 bases:

>100_bases
CCCGTCATCTGGTGACGATTAAGCTATTCTCGATTAAGTGATTCTCAATATAAGTAACTCTCAATATAAGTGACTCTCTT
GGGCTAAGTGTTTAGCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSLFDNVMIILCLIGASCFFSMSEIALAASRKIRLRQLADEGDARAEKVLQLQAVPGSFFTVVQIGLNAVAIMGGIVGES
AFRPYFYELLSPLLTDPWLSQMSFVLSFIVVTSAFILVADLMPKRIAMAMPEPVALAVVGPMSFCIVLLRPLVWFFNGMA
SGIFKLLQIPTVRNDAITSDDIYAVMNAGAEAGVLDRGDQQMMENVFEMQTVSVTSAMTARESLVYFLLQDSEEDIKRKI
SEDPHTKFLVCDGQLDMIKGFVDAKELLIRVINGENITLKGSNLVHTSLIIPDTLSLSEAMEYFKNSRADFAVVMNEYAL
VVGIVTTNDLQRAVMGAWSLHESEEQIIARDSNSWLVDGVTPITDVMRAFGIEEFPHNQNYETIAGFMMYMLRKIPKRTD
FVNYAGYKFEVVDIDSYKVDQLLVTRIDPIDKLNSPDV

Sequences:

>Translated_438_residues
MSLFDNVMIILCLIGASCFFSMSEIALAASRKIRLRQLADEGDARAEKVLQLQAVPGSFFTVVQIGLNAVAIMGGIVGES
AFRPYFYELLSPLLTDPWLSQMSFVLSFIVVTSAFILVADLMPKRIAMAMPEPVALAVVGPMSFCIVLLRPLVWFFNGMA
SGIFKLLQIPTVRNDAITSDDIYAVMNAGAEAGVLDRGDQQMMENVFEMQTVSVTSAMTARESLVYFLLQDSEEDIKRKI
SEDPHTKFLVCDGQLDMIKGFVDAKELLIRVINGENITLKGSNLVHTSLIIPDTLSLSEAMEYFKNSRADFAVVMNEYAL
VVGIVTTNDLQRAVMGAWSLHESEEQIIARDSNSWLVDGVTPITDVMRAFGIEEFPHNQNYETIAGFMMYMLRKIPKRTD
FVNYAGYKFEVVDIDSYKVDQLLVTRIDPIDKLNSPDV
>Mature_437_residues
SLFDNVMIILCLIGASCFFSMSEIALAASRKIRLRQLADEGDARAEKVLQLQAVPGSFFTVVQIGLNAVAIMGGIVGESA
FRPYFYELLSPLLTDPWLSQMSFVLSFIVVTSAFILVADLMPKRIAMAMPEPVALAVVGPMSFCIVLLRPLVWFFNGMAS
GIFKLLQIPTVRNDAITSDDIYAVMNAGAEAGVLDRGDQQMMENVFEMQTVSVTSAMTARESLVYFLLQDSEEDIKRKIS
EDPHTKFLVCDGQLDMIKGFVDAKELLIRVINGENITLKGSNLVHTSLIIPDTLSLSEAMEYFKNSRADFAVVMNEYALV
VGIVTTNDLQRAVMGAWSLHESEEQIIARDSNSWLVDGVTPITDVMRAFGIEEFPHNQNYETIAGFMMYMLRKIPKRTDF
VNYAGYKFEVVDIDSYKVDQLLVTRIDPIDKLNSPDV

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=391, Percent_Identity=27.3657289002558, Blast_Score=162, Evalue=5e-40,
Organism=Escherichia coli, GI1790664, Length=426, Percent_Identity=58.2159624413146, Blast_Score=527, Evalue=1e-151,
Organism=Escherichia coli, GI145693175, Length=425, Percent_Identity=23.5294117647059, Blast_Score=125, Evalue=6e-30,
Organism=Escherichia coli, GI87082033, Length=264, Percent_Identity=29.9242424242424, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1788119, Length=237, Percent_Identity=25.7383966244726, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786879, Length=269, Percent_Identity=23.0483271375465, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48794; Mature: 48663

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFDNVMIILCLIGASCFFSMSEIALAASRKIRLRQLADEGDARAEKVLQLQAVPGSFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCHH
TVVQIGLNAVAIMGGIVGESAFRPYFYELLSPLLTDPWLSQMSFVLSFIVVTSAFILVAD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LMPKRIAMAMPEPVALAVVGPMSFCIVLLRPLVWFFNGMASGIFKLLQIPTVRNDAITSD
HHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DIYAVMNAGAEAGVLDRGDQQMMENVFEMQTVSVTSAMTARESLVYFLLQDSEEDIKRKI
CHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHH
SEDPHTKFLVCDGQLDMIKGFVDAKELLIRVINGENITLKGSNLVHTSLIIPDTLSLSEA
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCHHHH
MEYFKNSRADFAVVMNEYALVVGIVTTNDLQRAVMGAWSLHESEEQIIARDSNSWLVDGV
HHHHHCCCCCEEHHHHCCEEEEEEEECHHHHHHHHHHHHCCCCCHHHEEECCCCEEECCC
TPITDVMRAFGIEEFPHNQNYETIAGFMMYMLRKIPKRTDFVNYAGYKFEVVDIDSYKVD
CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEECCCCCHH
QLLVTRIDPIDKLNSPDV
HHHHHHCCCHHCCCCCCC
>Mature Secondary Structure 
SLFDNVMIILCLIGASCFFSMSEIALAASRKIRLRQLADEGDARAEKVLQLQAVPGSFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCHH
TVVQIGLNAVAIMGGIVGESAFRPYFYELLSPLLTDPWLSQMSFVLSFIVVTSAFILVAD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LMPKRIAMAMPEPVALAVVGPMSFCIVLLRPLVWFFNGMASGIFKLLQIPTVRNDAITSD
HHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DIYAVMNAGAEAGVLDRGDQQMMENVFEMQTVSVTSAMTARESLVYFLLQDSEEDIKRKI
CHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHH
SEDPHTKFLVCDGQLDMIKGFVDAKELLIRVINGENITLKGSNLVHTSLIIPDTLSLSEA
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCHHHH
MEYFKNSRADFAVVMNEYALVVGIVTTNDLQRAVMGAWSLHESEEQIIARDSNSWLVDGV
HHHHHCCCCCEEHHHHCCEEEEEEEECHHHHHHHHHHHHCCCCCHHHEEECCCCEEECCC
TPITDVMRAFGIEEFPHNQNYETIAGFMMYMLRKIPKRTDFVNYAGYKFEVVDIDSYKVD
CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEECCCCCHH
QLLVTRIDPIDKLNSPDV
HHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]