| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176178
Identifier: 126176178
GI number: 126176178
Start: 4679328
End: 4679831
Strand: Direct
Name: 126176178
Synonym: Sbal_3990
Alternate gene names: NA
Gene position: 4679328-4679831 (Clockwise)
Preceding gene: 126176177
Following gene: 126176186
Centisome position: 91.26
GC content: 48.61
Gene sequence:
>504_bases ATGACATTTCAATCATTTGCACTCGATGATATTGCCGATTTGCACGAATCGGCCCAAGTAGAGTTTAAACTCGCAGGTGG CCGCGACGGCCAAGGCCAATTACCCGAAGATATTTGGGCGACTTATAGCTCCTTTGCCAACACTTTAGGTGGCGAGATCA TCCTAGGGGTGCGCGAAGAACGTGGCCATTTCAGCATTCAAGGCATCCCCAATCCGCTTCCTGTTTTACAAGAGTTTTGG GAGATACTCGATAATCCTAGCCGTACTAGCCATAATATTTTGGCGATTTCAGATGTGCAGATCATTGAAATTATGAATAA AAAGCTGATTCGTATCCGCGTACCGCTGGCGCCTGAGCAGCTCAAACCTATCTATGTCGGCGGCGATCCTTACACAGGGA GTTATTTTAGGGTGGGAGATGCCGACATGCATGCAAGCCGTCGGCAAGTCAACCTACTGTTACGCCGCGCCCATCTTTGC ATGAAGCAACTCAAGGCACGTTAA
Upstream 100 bases:
>100_bases ATTACGGGTCATCCGCAGAATCTTAAGACCAGACCTAAGTCTGGCCTTTCAATTGTTGACGTGCTACAACAAGTCATGTG TCGCTGACGGATAAGCTGCC
Downstream 100 bases:
>100_bases TTCGGAAAATCTAACATACTGTTATTACGTCAAAATCCAGCTAATAAATAACCGCCCATGGCCGCAATCGCTGCGCCCGT GACACGCATTAAGTTGCGTT
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Divergent AAA Domain Protein; Divergent AAA Domain Family Protein; Divergent AAA Region
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTFQSFALDDIADLHESAQVEFKLAGGRDGQGQLPEDIWATYSSFANTLGGEIILGVREERGHFSIQGIPNPLPVLQEFW EILDNPSRTSHNILAISDVQIIEIMNKKLIRIRVPLAPEQLKPIYVGGDPYTGSYFRVGDADMHASRRQVNLLLRRAHLC MKQLKAR
Sequences:
>Translated_167_residues MTFQSFALDDIADLHESAQVEFKLAGGRDGQGQLPEDIWATYSSFANTLGGEIILGVREERGHFSIQGIPNPLPVLQEFW EILDNPSRTSHNILAISDVQIIEIMNKKLIRIRVPLAPEQLKPIYVGGDPYTGSYFRVGDADMHASRRQVNLLLRRAHLC MKQLKAR >Mature_166_residues TFQSFALDDIADLHESAQVEFKLAGGRDGQGQLPEDIWATYSSFANTLGGEIILGVREERGHFSIQGIPNPLPVLQEFWE ILDNPSRTSHNILAISDVQIIEIMNKKLIRIRVPLAPEQLKPIYVGGDPYTGSYFRVGDADMHASRRQVNLLLRRAHLCM KQLKAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18811; Mature: 18680
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFQSFALDDIADLHESAQVEFKLAGGRDGQGQLPEDIWATYSSFANTLGGEIILGVREE CCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECC RGHFSIQGIPNPLPVLQEFWEILDNPSRTSHNILAISDVQIIEIMNKKLIRIRVPLAPEQ CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHCCCEEEEECCCCHHH LKPIYVGGDPYTGSYFRVGDADMHASRRQVNLLLRRAHLCMKQLKAR CCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TFQSFALDDIADLHESAQVEFKLAGGRDGQGQLPEDIWATYSSFANTLGGEIILGVREE CCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECC RGHFSIQGIPNPLPVLQEFWEILDNPSRTSHNILAISDVQIIEIMNKKLIRIRVPLAPEQ CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHCCCEEEEECCCCHHH LKPIYVGGDPYTGSYFRVGDADMHASRRQVNLLLRRAHLCMKQLKAR CCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA