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The map label for this gene is ytfE [C]

Identifier: 126176177

GI number: 126176177

Start: 4678386

End: 4679195

Strand: Direct

Name: ytfE [C]

Synonym: Sbal_3989

Alternate gene names: 126176177

Gene position: 4678386-4679195 (Clockwise)

Preceding gene: 126176176

Following gene: 126176178

Centisome position: 91.24

GC content: 47.78

Gene sequence:

>810_bases
ATGTCTGCTACTTCTATCACGCAAGATGCACAACCCTCAGTTCATGGTGTGGGTTCTCAACCTCGCCATGATTCACAACT
TGGTCAAGGTTCAGAGCTCAGTGAGAGCGCTCAGGATAACCACTGGCTAGCACGAAAAGTCGGTGAGTTAGTTGCCGAAG
ATTTTCGCCGCGCCCATGTGTTCAGCAAATTTGGTATCGATTTTTGTTGTGGCGGCGGTAAACCGCTGGCGGTTGCCTGT
GAACGCGCAGACATAGATCCGGCAAAAGTGGTTGCTGCGCTGAATGCCGTAACACTGACCGGCAGCAAAGAAGATGAGTT
GAATCAATTACCCTTAGATCAACTTGTCGATTATATCGAGTCGACACACCATCAATACGTGCGCGAAAAAGCCCCATTAT
TAGTCGAATATTCCGAGAAAATGGTGCGCGCCCACGGTGAGCACTATGCCGAAATTATTCCCTTTGCGGGTTGGGTACGT
GCTTTAGTTGAAGACCTGATGTCGCACTTAATGAAGGAAGAGAAAATACTGTTTCCGGCGATCCGCGGTTTGAGTCAAGC
AGAGCAGGTTGAAACTTGCTCTGGTCATATGGGTAATCCCATCAATGCGATGCAGAACGAACATGAAGAAGTCGGTTTGA
TTTTGCAAAAATTACGCGAGCTCACGAACGACTTCACGCCACCGGAACATGCTTGCACTACGTGGCGTGTGTGTTATGCC
ACGCTAGCGGAGTTTGAGGCCGACTTACATCAGCATATTCACTTAGAAAACAATATTCTATTTCCTAAGGCATTAGATCT
CGCTCAATAA

Upstream 100 bases:

>100_bases
CATCATCGGCAAATCCTGAGTATTTTAGTCGGGTTTAGTTGCCACGCATTAAAGATGCAAATAATATGAATGTAAATTTA
TTGCTGCTTTGGAGCTATTC

Downstream 100 bases:

>100_bases
TCGATTGAATGTTGCTGTTGTGATGCCCCTGAATTACGGGTCATCCGCAGAATCTTAAGACCAGACCTAAGTCTGGCCTT
TCAATTGTTGACGTGCTACA

Product: hemerythrin HHE cation binding domain-containing protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSATSITQDAQPSVHGVGSQPRHDSQLGQGSELSESAQDNHWLARKVGELVAEDFRRAHVFSKFGIDFCCGGGKPLAVAC
ERADIDPAKVVAALNAVTLTGSKEDELNQLPLDQLVDYIESTHHQYVREKAPLLVEYSEKMVRAHGEHYAEIIPFAGWVR
ALVEDLMSHLMKEEKILFPAIRGLSQAEQVETCSGHMGNPINAMQNEHEEVGLILQKLRELTNDFTPPEHACTTWRVCYA
TLAEFEADLHQHIHLENNILFPKALDLAQ

Sequences:

>Translated_269_residues
MSATSITQDAQPSVHGVGSQPRHDSQLGQGSELSESAQDNHWLARKVGELVAEDFRRAHVFSKFGIDFCCGGGKPLAVAC
ERADIDPAKVVAALNAVTLTGSKEDELNQLPLDQLVDYIESTHHQYVREKAPLLVEYSEKMVRAHGEHYAEIIPFAGWVR
ALVEDLMSHLMKEEKILFPAIRGLSQAEQVETCSGHMGNPINAMQNEHEEVGLILQKLRELTNDFTPPEHACTTWRVCYA
TLAEFEADLHQHIHLENNILFPKALDLAQ
>Mature_268_residues
SATSITQDAQPSVHGVGSQPRHDSQLGQGSELSESAQDNHWLARKVGELVAEDFRRAHVFSKFGIDFCCGGGKPLAVACE
RADIDPAKVVAALNAVTLTGSKEDELNQLPLDQLVDYIESTHHQYVREKAPLLVEYSEKMVRAHGEHYAEIIPFAGWVRA
LVEDLMSHLMKEEKILFPAIRGLSQAEQVETCSGHMGNPINAMQNEHEEVGLILQKLRELTNDFTPPEHACTTWRVCYAT
LAEFEADLHQHIHLENNILFPKALDLAQ

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=220, Percent_Identity=37.7272727272727, Blast_Score=144, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 29952; Mature: 29821

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATSITQDAQPSVHGVGSQPRHDSQLGQGSELSESAQDNHWLARKVGELVAEDFRRAHV
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FSKFGIDFCCGGGKPLAVACERADIDPAKVVAALNAVTLTGSKEDELNQLPLDQLVDYIE
HHHHCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHEECCCCCHHHHCCCHHHHHHHHH
STHHQYVREKAPLLVEYSEKMVRAHGEHYAEIIPFAGWVRALVEDLMSHLMKEEKILFPA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRGLSQAEQVETCSGHMGNPINAMQNEHEEVGLILQKLRELTNDFTPPEHACTTWRVCYA
HHCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TLAEFEADLHQHIHLENNILFPKALDLAQ
HHHHHHHHHHHHHHHCCCCCCCHHHCCCC
>Mature Secondary Structure 
SATSITQDAQPSVHGVGSQPRHDSQLGQGSELSESAQDNHWLARKVGELVAEDFRRAHV
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FSKFGIDFCCGGGKPLAVACERADIDPAKVVAALNAVTLTGSKEDELNQLPLDQLVDYIE
HHHHCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHEECCCCCHHHHCCCHHHHHHHHH
STHHQYVREKAPLLVEYSEKMVRAHGEHYAEIIPFAGWVRALVEDLMSHLMKEEKILFPA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRGLSQAEQVETCSGHMGNPINAMQNEHEEVGLILQKLRELTNDFTPPEHACTTWRVCYA
HHCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TLAEFEADLHQHIHLENNILFPKALDLAQ
HHHHHHHHHHHHHHHCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA