| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176067
Identifier: 126176067
GI number: 126176067
Start: 4553260
End: 4554570
Strand: Reverse
Name: 126176067
Synonym: Sbal_3877
Alternate gene names: NA
Gene position: 4554570-4553260 (Counterclockwise)
Preceding gene: 126176068
Following gene: 126176066
Centisome position: 88.83
GC content: 52.02
Gene sequence:
>1311_bases ATGGCTAAGATCTTAGGGACCAGTCTACAGGCCGCCGACCAAGTCGCATTACTGCGAACCTTAGGTTTGCTGTTGCAAAT TGGCTTAACCATGTTTGCCGCCGACACCTTTGGTCTTAGCCTGCAAATGGAGCCGTTAGTGCATGTGTTAGTGCTGGAGG TGTTATACCTGTCACTCACATTAGCCTTACGTAAACCCTTGTTTGCCAAGGAGCGTGGCCTCTTTATCGCGCTCAGTTTA GACACACTGTTTTGGATCTCTTGGCTGCACTTTTCCGGCGGCGCGACTAATGCGTTTATCTCGTTATTACTGCTGCCGAT TGCACTTGCGGCTGTGACTTTGCCAATCTGGGCGCCTTGGGCACTGACGGCTATTTCAACCTTAGCCTACAGCCTGATGA TTTTTACTGTGCCCGAATCCCCCATGCAGCACCACGGTATGGACATGAGTTCCCACTATTTAGGCATGTGGTTTAATTTT GTGATTTCAGCTTTGGTGATGACAACCAGCGTGGCGTTAATCACTAAACGTATGCGCCGCCAAGACGCACAGTTAGCTTA TATGCGCGAGGGGCAATTACGTCAGGAACAACTCTTGGCCCTAGGCACGGCATCGGCGCAGATGGCGCATCAATTAGCCA CACCGCTTTCGAGCCTGAGGTTGCTACTCGATGAAGTCAAAGAAGATATGAGCGGCACTTCGATAACGGTTGTGGAGATG GAGACTGCACTTGGCCGCTGTGAACATACGCTCACCGAGCTGCGATTAGCGACAGAGTCGATCCGCGATCGCCGCCAGCG GCCACAAAAGATCGCTGAGCTGGTGGACGGTTTAAAGCAGAAAACCTTACTGCTCATGCCGCAGACCGAACTGAACTGGC TGTTTACCTGTGCGCCTGAGCAACTGGCAGAGCAAAGCATTCTGACCGATATGAGCCTAACACCTGCCATCATGGCTTTG ATTGAAAATGCCGCCCGCGCCAGTGTCGAAACCCTAGGTGCGCCGCAGGTGGATATCAGCTTAGATATCGCGCCAAGTGA AGCTCAGATCTACTTGCAGATCCGCGATTATGGCGCTGGTATCGCGCCCTCTTTATTGCCGCAATTGGGCACCTTATTAA TTGAGAGTCCCAAGGGGCTAGGTGTTGCGCTGCTACTCAGTCATGCCAGCCTAGAGCGTTTGGGCGCAGAATTAATTCTG GCCAATCATCCCCAAGGCGGTACTGTGGCACAAATTCGCTTTACGATTCTAAAGGACAAAGCGGCATCGTTATCGCCCAA GACTAAGGCCGCTGACGGAGTCAGATCATGA
Upstream 100 bases:
>100_bases GTATTCGCTCCGACATTGATTTCGCCACTGGCGCACGCCAAGCATTAACGCAATCGAGTGGCGCACTGGCCGCACTCGGA CTCACTCTGTAGGAATGGCT
Downstream 100 bases:
>100_bases AACGTTTATTGATTGTCGAGGATGATCTTTCTCTGGCGAGTATTTTAGGCCGACGGCTCACGCGCCACGGCTTTGAGTGC CGCTTAACCCATGATGCCAG
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Sensor Histidine Kinase; Histidine Kinase; Two-Component Sensor; Two-Component Sensor Histidine Kinase; Two Component System Sensor Kinase; Two-Component Sensor Histidine Protein Kinase; Signal Transduction Histidine Kinase; Two-Component System Sensor Protein; Sensory Transduction Protein Kinase; Sensor Protein; His Kinase A Phosphoacceptor Domain-Containing Protein; Two-Component System Sensor Kinase; Periplasmic Sensory Histidine Protein Kinase; Periplasmic Sensor Signal Transduction; Transmembrane Sensor Histidine Kinase Protein; ATPase Domain-Containing Protein; ATPase-Like Histidine Kinase A; Histidine Protein Kinase; Two-Component Regulatory System Sensor Kinase Protein
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MAKILGTSLQAADQVALLRTLGLLLQIGLTMFAADTFGLSLQMEPLVHVLVLEVLYLSLTLALRKPLFAKERGLFIALSL DTLFWISWLHFSGGATNAFISLLLLPIALAAVTLPIWAPWALTAISTLAYSLMIFTVPESPMQHHGMDMSSHYLGMWFNF VISALVMTTSVALITKRMRRQDAQLAYMREGQLRQEQLLALGTASAQMAHQLATPLSSLRLLLDEVKEDMSGTSITVVEM ETALGRCEHTLTELRLATESIRDRRQRPQKIAELVDGLKQKTLLLMPQTELNWLFTCAPEQLAEQSILTDMSLTPAIMAL IENAARASVETLGAPQVDISLDIAPSEAQIYLQIRDYGAGIAPSLLPQLGTLLIESPKGLGVALLLSHASLERLGAELIL ANHPQGGTVAQIRFTILKDKAASLSPKTKAADGVRS
Sequences:
>Translated_436_residues MAKILGTSLQAADQVALLRTLGLLLQIGLTMFAADTFGLSLQMEPLVHVLVLEVLYLSLTLALRKPLFAKERGLFIALSL DTLFWISWLHFSGGATNAFISLLLLPIALAAVTLPIWAPWALTAISTLAYSLMIFTVPESPMQHHGMDMSSHYLGMWFNF VISALVMTTSVALITKRMRRQDAQLAYMREGQLRQEQLLALGTASAQMAHQLATPLSSLRLLLDEVKEDMSGTSITVVEM ETALGRCEHTLTELRLATESIRDRRQRPQKIAELVDGLKQKTLLLMPQTELNWLFTCAPEQLAEQSILTDMSLTPAIMAL IENAARASVETLGAPQVDISLDIAPSEAQIYLQIRDYGAGIAPSLLPQLGTLLIESPKGLGVALLLSHASLERLGAELIL ANHPQGGTVAQIRFTILKDKAASLSPKTKAADGVRS >Mature_435_residues AKILGTSLQAADQVALLRTLGLLLQIGLTMFAADTFGLSLQMEPLVHVLVLEVLYLSLTLALRKPLFAKERGLFIALSLD TLFWISWLHFSGGATNAFISLLLLPIALAAVTLPIWAPWALTAISTLAYSLMIFTVPESPMQHHGMDMSSHYLGMWFNFV ISALVMTTSVALITKRMRRQDAQLAYMREGQLRQEQLLALGTASAQMAHQLATPLSSLRLLLDEVKEDMSGTSITVVEME TALGRCEHTLTELRLATESIRDRRQRPQKIAELVDGLKQKTLLLMPQTELNWLFTCAPEQLAEQSILTDMSLTPAIMALI ENAARASVETLGAPQVDISLDIAPSEAQIYLQIRDYGAGIAPSLLPQLGTLLIESPKGLGVALLLSHASLERLGAELILA NHPQGGTVAQIRFTILKDKAASLSPKTKAADGVRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47537; Mature: 47405
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKILGTSLQAADQVALLRTLGLLLQIGLTMFAADTFGLSLQMEPLVHVLVLEVLYLSLT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHH LALRKPLFAKERGLFIALSLDTLFWISWLHFSGGATNAFISLLLLPIALAAVTLPIWAPW HHHHCCCHHCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH ALTAISTLAYSLMIFTVPESPMQHHGMDMSSHYLGMWFNFVISALVMTTSVALITKRMRR HHHHHHHHHHHHHEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDAQLAYMREGQLRQEQLLALGTASAQMAHQLATPLSSLRLLLDEVKEDMSGTSITVVEM HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE ETALGRCEHTLTELRLATESIRDRRQRPQKIAELVDGLKQKTLLLMPQTELNWLFTCAPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEECHH QLAEQSILTDMSLTPAIMALIENAARASVETLGAPQVDISLDIAPSEAQIYLQIRDYGAG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCC IAPSLLPQLGTLLIESPKGLGVALLLSHASLERLGAELILANHPQGGTVAQIRFTILKDK CCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEECC AASLSPKTKAADGVRS CCCCCCCCCCCCCCCC >Mature Secondary Structure AKILGTSLQAADQVALLRTLGLLLQIGLTMFAADTFGLSLQMEPLVHVLVLEVLYLSLT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHH LALRKPLFAKERGLFIALSLDTLFWISWLHFSGGATNAFISLLLLPIALAAVTLPIWAPW HHHHCCCHHCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH ALTAISTLAYSLMIFTVPESPMQHHGMDMSSHYLGMWFNFVISALVMTTSVALITKRMRR HHHHHHHHHHHHHEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDAQLAYMREGQLRQEQLLALGTASAQMAHQLATPLSSLRLLLDEVKEDMSGTSITVVEM HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE ETALGRCEHTLTELRLATESIRDRRQRPQKIAELVDGLKQKTLLLMPQTELNWLFTCAPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEECHH QLAEQSILTDMSLTPAIMALIENAARASVETLGAPQVDISLDIAPSEAQIYLQIRDYGAG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCC IAPSLLPQLGTLLIESPKGLGVALLLSHASLERLGAELILANHPQGGTVAQIRFTILKDK CCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEECC AASLSPKTKAADGVRS CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA