Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is 126175960

Identifier: 126175960

GI number: 126175960

Start: 4421240

End: 4421569

Strand: Reverse

Name: 126175960

Synonym: Sbal_3766

Alternate gene names: NA

Gene position: 4421569-4421240 (Counterclockwise)

Preceding gene: 126175961

Following gene: 126175959

Centisome position: 86.23

GC content: 49.39

Gene sequence:

>330_bases
GTGTCTAAGCCATCGGAACAACCTAAGTTAGAAGCTGCGCAAATTTGCCCTCTATGCCAAGGCGCGAATCAATGTGCGGT
GATTGTTGGTAAGGGCATTGAGGATTGTTGGTGTGCGCAGCAGGTGTTTCCGACTTTGGCTGCCTTGCAAGCGCAAGCAT
CAGATTCGCTACAAGGTGCAATCAGCCCCATTTTACCGTCTGCCGATGCGTGTATTTGCCAAACCTGTCTTAGCCAACTC
AAGCAGAATTTAAGTCAGGGGCAGATTACAACGCAGGATGAAAAAAGCCCATCGAGTGTGAGCGATGGGCTAGGTTATGA
GGTGAAATAG

Upstream 100 bases:

>100_bases
CATTGAATAATCTATCTCGCGCTTATTGAAAAACCATTATGATCTCCGCGCTATAACAACTTATCTTGCTATAACAACTT
ATCTTGCAATAAGGATTACC

Downstream 100 bases:

>100_bases
CGGGCTGAAGTAATGAGCTATCGATTTATGGTGTAATCCAGTTGCACGCTAGTTTGTGCTTCCACGGCTATTGCGCGACA
ATTACCCTGACCGGTTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSKPSEQPKLEAAQICPLCQGANQCAVIVGKGIEDCWCAQQVFPTLAALQAQASDSLQGAISPILPSADACICQTCLSQL
KQNLSQGQITTQDEKSPSSVSDGLGYEVK

Sequences:

>Translated_109_residues
MSKPSEQPKLEAAQICPLCQGANQCAVIVGKGIEDCWCAQQVFPTLAALQAQASDSLQGAISPILPSADACICQTCLSQL
KQNLSQGQITTQDEKSPSSVSDGLGYEVK
>Mature_108_residues
SKPSEQPKLEAAQICPLCQGANQCAVIVGKGIEDCWCAQQVFPTLAALQAQASDSLQGAISPILPSADACICQTCLSQLK
QNLSQGQITTQDEKSPSSVSDGLGYEVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11412; Mature: 11281

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPSEQPKLEAAQICPLCQGANQCAVIVGKGIEDCWCAQQVFPTLAALQAQASDSLQGA
CCCCCCCCCCCHHHHCHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISPILPSADACICQTCLSQLKQNLSQGQITTQDEKSPSSVSDGLGYEVK
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure 
SKPSEQPKLEAAQICPLCQGANQCAVIVGKGIEDCWCAQQVFPTLAALQAQASDSLQGA
CCCCCCCCCCHHHHCHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISPILPSADACICQTCLSQLKQNLSQGQITTQDEKSPSSVSDGLGYEVK
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA