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The map label for this gene is mltD [H]

Identifier: 126175931

GI number: 126175931

Start: 4379773

End: 4381224

Strand: Direct

Name: mltD [H]

Synonym: Sbal_3737

Alternate gene names: 126175931

Gene position: 4379773-4381224 (Clockwise)

Preceding gene: 126175926

Following gene: 126175936

Centisome position: 85.42

GC content: 49.31

Gene sequence:

>1452_bases
ATGCGGAAACATTTTCGCCAAACGCACTCTTTTACAGTGCTAATGCTGGCCATGTTCGTGGCCCAATTGAGCGGTTGCGC
GACCACGTCGGCAAGCCCATCGACCACAGAATTCAGTGCCCCAGCAAATGATGTGAGTAACGGTAGCGACCACTCGCCAC
AACACCAGCAGCACACGCCACCCGCTGTGGTTGAGCAGTACAGCGACGTTTGGGAAAAGATCCAACACGCCAATACCATT
GACGTACATGACGATGCCGAAGTGCGCAAACAGCGTAACTTTTTCGATGATAAACAGAAATTTATGAACCAAGTCGGCGA
ACGCGCCGAGCCCTTTTTGTATTACATCGTCAGCCAGCTAGAAGCCCGTAACATGCCATTAGAATTGGCGTTATTACCCA
TAGTCGAGAGTGGTTACAATCCACTGGCACAGGCAAACGGCCCGGCTGGACTGTGGCAGATGATCCCCGCCACAGGGCGT
AATTTTGGCTTAACGGTTAACTCTGCCTACGACGGTCGCAAAGATGCGCTGGCCTCAACCGATGCCGTGCTCGACTATCT
ACAGCATTTATACGACACCTTAGATCACGACTGGATCAACGCCGTCGCCGCCTACAATACCGGTGAATTGGTGATTAAAG
CCGCCATCGACAAGAACAAAGCCAAGGGCAAACCGACGGACTTTTGGTCGCTGGGCATTCCAGCGAAACGCGTACAAACT
GTGCCTAAGTGGCTGGCGTTTATTCAAATTATTCGCGCTCCTAATCATTACAATCTAAAAGTACGGCCGATTGCTAACCG
CCCTTTCTTGGATAGAGTGCCTGCGCCCAATGGCGTGGATATCGGCCAAATCGCCAATGCGGCTGGGCTAAGCAAGGCAG
AATTTAAAACCTATAACCCTGGCTTTCGCCAAGGCGTGATCCCGAGCAAAGGCAAATATCAAATCGCCTTACCGCTGGAA
AACATAGGTCAATATCAGGAAAATCACGACAAACTCTACGCCCAAAAACGCTATGACAGCCAAAGCTACATAGTTAAATC
CGGCGACAGTCTAGGCACAATCGCGGCTAAGTTTGATACGTCAGTCAAAGCATTAAAACAGGCTAATAATCTGACCTCTG
ACCGTCTCAAAGTCGGCCAAGAGCTCACACTATTAACGCCAATGGCAGCCAATGATAATGTGCCTGAACCCGCTAAAACC
AACACTAAGGCCGATAGCAAAGTCAGCAGCAAGTCATCGACTAAAGCAAATGCCAGTGGCACTAAAGCCACCAGCTCAAA
ATCGGCCGACAAACCAGCAGCAAAAGCCAAAACCTATAAAGTGAAATCCGGCGATTCACTGGATAAAATCGCCCGTAAGA
ATAAGGTCAAACTGGCTGATTTAATGAAGTGGAACCAGCTCAATGGCAAGAGCATTATTAAGCCAGGCCAAGAACTGAAA
ATCAGCGAATAA

Upstream 100 bases:

>100_bases
TGCAAATAGGGGGAAACCGTGGGGAGCTATCCAGAAACGCGAAAACAGATTAGCATGTGCACCAATATGGAATGCCCAGT
TAACTCATCACAGGACAATC

Downstream 100 bases:

>100_bases
CGCTTACGGCGTTAACAGCAAAAAGCCCAACAAAGCGCGAATTAAAAACGCTGTGTTGGGCTTTTTTCTGTCCCACTCTT
ACAGGAAGAGTGGCTTATGA

Product: MltD domain-containing protein

Products: 1,6-Anhydrobond In The Muramic Acid Residue [C]

Alternate protein names: Murein hydrolase D; Regulatory protein dniR [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MRKHFRQTHSFTVLMLAMFVAQLSGCATTSASPSTTEFSAPANDVSNGSDHSPQHQQHTPPAVVEQYSDVWEKIQHANTI
DVHDDAEVRKQRNFFDDKQKFMNQVGERAEPFLYYIVSQLEARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGR
NFGLTVNSAYDGRKDALASTDAVLDYLQHLYDTLDHDWINAVAAYNTGELVIKAAIDKNKAKGKPTDFWSLGIPAKRVQT
VPKWLAFIQIIRAPNHYNLKVRPIANRPFLDRVPAPNGVDIGQIANAAGLSKAEFKTYNPGFRQGVIPSKGKYQIALPLE
NIGQYQENHDKLYAQKRYDSQSYIVKSGDSLGTIAAKFDTSVKALKQANNLTSDRLKVGQELTLLTPMAANDNVPEPAKT
NTKADSKVSSKSSTKANASGTKATSSKSADKPAAKAKTYKVKSGDSLDKIARKNKVKLADLMKWNQLNGKSIIKPGQELK
ISE

Sequences:

>Translated_483_residues
MRKHFRQTHSFTVLMLAMFVAQLSGCATTSASPSTTEFSAPANDVSNGSDHSPQHQQHTPPAVVEQYSDVWEKIQHANTI
DVHDDAEVRKQRNFFDDKQKFMNQVGERAEPFLYYIVSQLEARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGR
NFGLTVNSAYDGRKDALASTDAVLDYLQHLYDTLDHDWINAVAAYNTGELVIKAAIDKNKAKGKPTDFWSLGIPAKRVQT
VPKWLAFIQIIRAPNHYNLKVRPIANRPFLDRVPAPNGVDIGQIANAAGLSKAEFKTYNPGFRQGVIPSKGKYQIALPLE
NIGQYQENHDKLYAQKRYDSQSYIVKSGDSLGTIAAKFDTSVKALKQANNLTSDRLKVGQELTLLTPMAANDNVPEPAKT
NTKADSKVSSKSSTKANASGTKATSSKSADKPAAKAKTYKVKSGDSLDKIARKNKVKLADLMKWNQLNGKSIIKPGQELK
ISE
>Mature_483_residues
MRKHFRQTHSFTVLMLAMFVAQLSGCATTSASPSTTEFSAPANDVSNGSDHSPQHQQHTPPAVVEQYSDVWEKIQHANTI
DVHDDAEVRKQRNFFDDKQKFMNQVGERAEPFLYYIVSQLEARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGR
NFGLTVNSAYDGRKDALASTDAVLDYLQHLYDTLDHDWINAVAAYNTGELVIKAAIDKNKAKGKPTDFWSLGIPAKRVQT
VPKWLAFIQIIRAPNHYNLKVRPIANRPFLDRVPAPNGVDIGQIANAAGLSKAEFKTYNPGFRQGVIPSKGKYQIALPLE
NIGQYQENHDKLYAQKRYDSQSYIVKSGDSLGTIAAKFDTSVKALKQANNLTSDRLKVGQELTLLTPMAANDNVPEPAKT
NTKADSKVSSKSSTKANASGTKATSSKSADKPAAKAKTYKVKSGDSLDKIARKNKVKLADLMKWNQLNGKSIIKPGQELK
ISE

Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1786405, Length=424, Percent_Identity=33.2547169811321, Blast_Score=247, Evalue=1e-66,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR010511
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01476 LysM; PF06474 MLTD_N; PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 53169; Mature: 53169

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHFRQTHSFTVLMLAMFVAQLSGCATTSASPSTTEFSAPANDVSNGSDHSPQHQQHTP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAVVEQYSDVWEKIQHANTIDVHDDAEVRKQRNFFDDKQKFMNQVGERAEPFLYYIVSQL
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
EARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGRNFGLTVNSAYDGRKDALAST
HHCCCCEEEEEEHHHHCCCCCHHHCCCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH
DAVLDYLQHLYDTLDHDWINAVAAYNTGELVIKAAIDKNKAKGKPTDFWSLGIPAKRVQT
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCHHHHHH
VPKWLAFIQIIRAPNHYNLKVRPIANRPFLDRVPAPNGVDIGQIANAAGLSKAEFKTYNP
HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
GFRQGVIPSKGKYQIALPLENIGQYQENHDKLYAQKRYDSQSYIVKSGDSLGTIAAKFDT
CHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHHH
SVKALKQANNLTSDRLKVGQELTLLTPMAANDNVPEPAKTNTKADSKVSSKSSTKANASG
HHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
TKATSSKSADKPAAKAKTYKVKSGDSLDKIARKNKVKLADLMKWNQLNGKSIIKPGQELK
CCCCCCCCCCCCCHHCEEEEECCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHCCCCCCCC
ISE
CCC
>Mature Secondary Structure
MRKHFRQTHSFTVLMLAMFVAQLSGCATTSASPSTTEFSAPANDVSNGSDHSPQHQQHTP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAVVEQYSDVWEKIQHANTIDVHDDAEVRKQRNFFDDKQKFMNQVGERAEPFLYYIVSQL
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
EARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGRNFGLTVNSAYDGRKDALAST
HHCCCCEEEEEEHHHHCCCCCHHHCCCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH
DAVLDYLQHLYDTLDHDWINAVAAYNTGELVIKAAIDKNKAKGKPTDFWSLGIPAKRVQT
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCHHHHHH
VPKWLAFIQIIRAPNHYNLKVRPIANRPFLDRVPAPNGVDIGQIANAAGLSKAEFKTYNP
HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
GFRQGVIPSKGKYQIALPLENIGQYQENHDKLYAQKRYDSQSYIVKSGDSLGTIAAKFDT
CHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHHH
SVKALKQANNLTSDRLKVGQELTLLTPMAANDNVPEPAKTNTKADSKVSSKSSTKANASG
HHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
TKATSSKSADKPAAKAKTYKVKSGDSLDKIARKNKVKLADLMKWNQLNGKSIIKPGQELK
CCCCCCCCCCCCCHHCEEEEECCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHCCCCCCCC
ISE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]