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The map label for this gene is nohA [H]

Identifier: 126175797

GI number: 126175797

Start: 4231419

End: 4231850

Strand: Reverse

Name: nohA [H]

Synonym: Sbal_3602

Alternate gene names: 126175797

Gene position: 4231850-4231419 (Counterclockwise)

Preceding gene: 126175798

Following gene: 126175796

Centisome position: 82.53

GC content: 47.92

Gene sequence:

>432_bases
GTGCCAGTGCACAGCAAGCTCGGTCGCGTGTGTTTATACAAAATGGCCGATGTGGTGGGTAACAGACTTGCCAACGAGCG
CAAAAAAACCATCACTAAACCCGATGAAGATGATCCCGATAAGCCAGATATGGACTACGAACGCTGGCGCTTAATCCGAG
CCCAAGCAGTTGGGCAGGAGATTAAAAACGAAAAAGACCTCAAAGAAGTGGTCGAAGTTAATTTTGCTACCTTTGTGCTA
AATCGCATTGCTGCGCAAATTGCCCCAGTGCTCGATCAAATACATATACGGGTAAAACGCAAATTCCCCGACATTCCAGA
ACGCACAATCGACGCTATCAAAGCGGAGGTGATTAAAAGCCAAAACACCGCCGCCGATCTTGCGGAGGGCATTGAGGGTT
TATTAGATGAGTATATCGGCCGCGCAGATTAA

Upstream 100 bases:

>100_bases
GGCACGCATTCAACCATCACCACCCGAGCCTGTTCTACTGAGTAAAACCGACCTATGCAAAAGCCTTGAGATCAGCACCC
AAGCGTTTGATAAGTGGGAC

Downstream 100 bases:

>100_bases
AAATCTGAAAGCCGCCGTTGCTGCTGGGCTGCGTTCGTTCTATCGCCCACCCATGCTCACCTGTTCTGAATATGCCGACG
AGCACTTTTACATGTCGTCG

Product: phage DNA packaging Nu1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPVHSKLGRVCLYKMADVVGNRLANERKKTITKPDEDDPDKPDMDYERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVL
NRIAAQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYIGRAD

Sequences:

>Translated_143_residues
MPVHSKLGRVCLYKMADVVGNRLANERKKTITKPDEDDPDKPDMDYERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVL
NRIAAQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYIGRAD
>Mature_142_residues
PVHSKLGRVCLYKMADVVGNRLANERKKTITKPDEDDPDKPDMDYERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLN
RIAAQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYIGRAD

Specific function: Unknown

COG id: COG4220

COG function: function code L; Phage DNA packaging protein, Nu1 subunit of terminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To phage lambda DNA packaging protein NU1 [H]

Homologues:

Organism=Escherichia coli, GI1786773, Length=109, Percent_Identity=49.5412844036697, Blast_Score=104, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010906
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07471 Phage_Nu1 [H]

EC number: NA

Molecular weight: Translated: 16266; Mature: 16135

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVHSKLGRVCLYKMADVVGNRLANERKKTITKPDEDDPDKPDMDYERWRLIRAQAVGQE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IKNEKDLKEVVEVNFATFVLNRIAAQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
QNTAADLAEGIEGLLDEYIGRAD
CCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PVHSKLGRVCLYKMADVVGNRLANERKKTITKPDEDDPDKPDMDYERWRLIRAQAVGQE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IKNEKDLKEVVEVNFATFVLNRIAAQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
QNTAADLAEGIEGLLDEYIGRAD
CCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1630906 [H]