| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yhhW [C]
Identifier: 126175666
GI number: 126175666
Start: 4070569
End: 4071426
Strand: Reverse
Name: yhhW [C]
Synonym: Sbal_3469
Alternate gene names: 126175666
Gene position: 4071426-4070569 (Counterclockwise)
Preceding gene: 126175667
Following gene: 126175665
Centisome position: 79.41
GC content: 49.65
Gene sequence:
>858_bases ATGAAAGTATTAAGTCAGTTTTCCGCCAAAGCCGCGATGGATGGCGATGGGGTCAATATTCGCCGTGTCGCCGATTTTGT GACGACTAAATTTGATCCTTTCTTGATGATCGACGAAATAAAATCCGATGATGAACAAGATTTTATCGGCGGCTTCCCCG CACATCCCCATCGCGGGATGGAGACCTTCACTTATATTCGTAAGGGCGGTTTTGAGCATCGTGACCAAATGGGTAATGTG AAGGCGATTCGTGCCGGCGATGTGCAGTGGATGAGTACCGGGTTCGGGGTAGTGCATTCTGAAATGCCACTTGCCGATGC TGTCGATGGTCTGCATGGATTCCAAATTTGGGTCAACATGCCCGCCAAAGACAAGCTGCGTCCAGCGAAATATCAAGATA CTGCGGGTAGCGCGAGCGTTGAAGCGACCAATAACACTGGCGCTAGCTTAAAAGCCTTAGCGGGTGATTGGGGCTTTAAA GATCAGCCACTGATTAGTGCGGCTATTCAAGGATTAGCGGGCGAGGCTGCCATTGCTGATTTGAGCCTAGCGCCAAACGC TGATGCCACGCTTGATTTGTCTCAACACGAGTTTGTCGCCTTGTACTTGTACCAAGGTGACTTAAGCAAGGGTGAAGATT CACAGTGGTCATATCATCAGGGCGAGTTTTTAGTGCTCGATAGCCAAAGTGTGCTTAAGCTTAAAGCCGATGAGCGCGGC GCTGGGATGCTACTGTTTGCCGGTAAACCCATCCGTGAAAAAATCGTCCAGATGGGTCCATTTGTAATGAACACCCAAGC GGAAATTCAGCAGGCGATTCGCGATTATCAAGAAGGGCGTTTCGGCCAAATTGCGTAA
Upstream 100 bases:
>100_bases TTGTTATTCTGCCTCCATCAGCAAAGCGTTTGCGTCTTGTGTTAGCCGTATGATTTTGGCGTTTCACGCACCGCTTTGCT CAACCGATAGGAGAGCAGCA
Downstream 100 bases:
>100_bases TTCGTTAAATCTGCCGCGCTGAGCTAATTCTAAACCCAAGCCCTGTATTCCTACAGGGCTTTTTTGTTGCTGTTCAGGCC TGCTATGTCTATTGCTTAAG
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein VC_A0969 [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGMETFTYIRKGGFEHRDQMGNV KAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNMPAKDKLRPAKYQDTAGSASVEATNNTGASLKALAGDWGFK DQPLISAAIQGLAGEAAIADLSLAPNADATLDLSQHEFVALYLYQGDLSKGEDSQWSYHQGEFLVLDSQSVLKLKADERG AGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGQIA
Sequences:
>Translated_285_residues MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGMETFTYIRKGGFEHRDQMGNV KAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNMPAKDKLRPAKYQDTAGSASVEATNNTGASLKALAGDWGFK DQPLISAAIQGLAGEAAIADLSLAPNADATLDLSQHEFVALYLYQGDLSKGEDSQWSYHQGEFLVLDSQSVLKLKADERG AGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGQIA >Mature_285_residues MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGMETFTYIRKGGFEHRDQMGNV KAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNMPAKDKLRPAKYQDTAGSASVEATNNTGASLKALAGDWGFK DQPLISAAIQGLAGEAAIADLSLAPNADATLDLSQHEFVALYLYQGDLSKGEDSQWSYHQGEFLVLDSQSVLKLKADERG AGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGQIA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=286, Percent_Identity=32.1678321678322, Blast_Score=145, Evalue=5e-35, Organism=Homo sapiens, GI4505823, Length=286, Percent_Identity=32.1678321678322, Blast_Score=145, Evalue=5e-35, Organism=Escherichia coli, GI1789847, Length=105, Percent_Identity=38.0952380952381, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31164; Mature: 31164
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGM CCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCCH ETFTYIRKGGFEHRDQMGNVKAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNM HHHHHHHHCCCCHHHHCCCEEEEECCCEEEEECCCCEEECCCCHHHHHCCCCEEEEEEEC PAKDKLRPAKYQDTAGSASVEATNNTGASLKALAGDWGFKDQPLISAAIQGLAGEAAIAD CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHEEE LSLAPNADATLDLSQHEFVALYLYQGDLSKGEDSQWSYHQGEFLVLDSQSVLKLKADERG EEECCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCC AGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGQIA CEEEEECCCCHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGM CCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCCH ETFTYIRKGGFEHRDQMGNVKAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNM HHHHHHHHCCCCHHHHCCCEEEEECCCEEEEECCCCEEECCCCHHHHHCCCCEEEEEEEC PAKDKLRPAKYQDTAGSASVEATNNTGASLKALAGDWGFKDQPLISAAIQGLAGEAAIAD CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHEEE LSLAPNADATLDLSQHEFVALYLYQGDLSKGEDSQWSYHQGEFLVLDSQSVLKLKADERG EEECCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCC AGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGQIA CEEEEECCCCHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]