| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175617
Identifier: 126175617
GI number: 126175617
Start: 4009542
End: 4010126
Strand: Reverse
Name: 126175617
Synonym: Sbal_3420
Alternate gene names: NA
Gene position: 4010126-4009542 (Counterclockwise)
Preceding gene: 126175618
Following gene: 126175613
Centisome position: 78.21
GC content: 44.79
Gene sequence:
>585_bases ATGGACATGACACCCAGCTCTAATGCCGCCGAGGCTCCCAAACGTAACATCAAGCTCGATAATACAGAGCTCATCAAAAC CAGTTTTTGGGTGAGTCAGGTCTTTATGATCATTGCGACTGTTGTCGGAGTGTATTTGGCCGCGCAGGAAGGTTTATCGC AGGCGATTAAGTTCGATAACTTAAGTAATATGCAAAACAACTATCATCTGCGCCATGCGCTCTATGATGAAGTGAGTGAC AACGTGGCGACTTTGAGCCGTTATGTCGACACGGTTGAAACAGTGAGCGGTAATAGTTTAGTGAAAATGCACCCGCAAAT GGGACTGTTTGTTTGGGAGAATATGCGCTATTCAGCCAATGCCCTAGAGACGCCGAGCCACATCTTGTCCGATATTCGTC GTTTTTATTTAGAGTCTGAGCAGATCATTAGCGATATTGAAACTCGCCACTACAGTGTTTCCTACGGTAAGGGCCTGCTG CAAAATGTACTGAGTAAGATCCAAGAAGATACTTTGCCGAAGCTTAAAACGAATTATGAAACCCTGTCAAAAGAGCTTAG CGATAACGACATTACCGTAGACTAA
Upstream 100 bases:
>100_bases AATCGTGATTTTTACTGAGGAAACTCATTCTTTAGTCGTGTAAGATATGCCCTCTATTGCGTTATACCGCCTTTTACTCT TGATTTGACAGGATAAACAT
Downstream 100 bases:
>100_bases AGTATCTTGGCTTAGCTCCTCCCTAAACATCAGGGGTCATTCTTATCCCTGATGTTTGAATTCATTGATGAATTCAGTGT TGCAGACACCACCTCTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MDMTPSSNAAEAPKRNIKLDNTELIKTSFWVSQVFMIIATVVGVYLAAQEGLSQAIKFDNLSNMQNNYHLRHALYDEVSD NVATLSRYVDTVETVSGNSLVKMHPQMGLFVWENMRYSANALETPSHILSDIRRFYLESEQIISDIETRHYSVSYGKGLL QNVLSKIQEDTLPKLKTNYETLSKELSDNDITVD
Sequences:
>Translated_194_residues MDMTPSSNAAEAPKRNIKLDNTELIKTSFWVSQVFMIIATVVGVYLAAQEGLSQAIKFDNLSNMQNNYHLRHALYDEVSD NVATLSRYVDTVETVSGNSLVKMHPQMGLFVWENMRYSANALETPSHILSDIRRFYLESEQIISDIETRHYSVSYGKGLL QNVLSKIQEDTLPKLKTNYETLSKELSDNDITVD >Mature_194_residues MDMTPSSNAAEAPKRNIKLDNTELIKTSFWVSQVFMIIATVVGVYLAAQEGLSQAIKFDNLSNMQNNYHLRHALYDEVSD NVATLSRYVDTVETVSGNSLVKMHPQMGLFVWENMRYSANALETPSHILSDIRRFYLESEQIISDIETRHYSVSYGKGLL QNVLSKIQEDTLPKLKTNYETLSKELSDNDITVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22030; Mature: 22030
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMTPSSNAAEAPKRNIKLDNTELIKTSFWVSQVFMIIATVVGVYLAAQEGLSQAIKFDN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LSNMQNNYHLRHALYDEVSDNVATLSRYVDTVETVSGNSLVKMHPQMGLFVWENMRYSAN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCC ALETPSHILSDIRRFYLESEQIISDIETRHYSVSYGKGLLQNVLSKIQEDTLPKLKTNYE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH TLSKELSDNDITVD HHHHHCCCCCCCCC >Mature Secondary Structure MDMTPSSNAAEAPKRNIKLDNTELIKTSFWVSQVFMIIATVVGVYLAAQEGLSQAIKFDN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LSNMQNNYHLRHALYDEVSDNVATLSRYVDTVETVSGNSLVKMHPQMGLFVWENMRYSAN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCC ALETPSHILSDIRRFYLESEQIISDIETRHYSVSYGKGLLQNVLSKIQEDTLPKLKTNYE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH TLSKELSDNDITVD HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA