| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175499
Identifier: 126175499
GI number: 126175499
Start: 3862160
End: 3862879
Strand: Direct
Name: 126175499
Synonym: Sbal_3299
Alternate gene names: NA
Gene position: 3862160-3862879 (Clockwise)
Preceding gene: 126175497
Following gene: 126175500
Centisome position: 75.32
GC content: 49.86
Gene sequence:
>720_bases ATGGCTTACATAAACAACGCAGCAATTTTGCGGTCTTTATCCTGTGCAAGTTTCAGCTTGTACTACAGCATGAGTGCGGC AGCATCCCATCTCGAAGTGGATGATCCCGCCCTCGCAGAACACTGCGAATTAGAACTCGGCTGGCAACAACCTAGGTCGG ATCATGCTCGTCCACAATTTAACGCAACCACGACTTGCAGCCGCAATCAATGGGAATGGCATTTAGGATTAGCGTCCAAT GCCAATGACGCTATTCGTGAGGAGCAGGCTGAAGTCGGTATCAAGCTACCACTCAACGTAAACTCCCACTCTGATTCAGG TTCGGATTCAGATCGGCAACAGGATGATTGGCACAGCGCAGTGGTGATCAACTTGCAGAAAAACCTCGATAACGGTAACG GATTTGCCACCGAAGCCTTTGGCATTATTGGCAAAACCTTAGGCGATTCCGATGTCAGCCTGTATGCCAACTTAGGTTTT ATCCATGAGTTTGATGAATCGACCCAATTACTTGCGGGCATCGCGGCGGCCTATGAACTCAGTAGTCACCATCGCGTGAT AGCCGAGCTTTATCAAAAAGAGTTGAGTGAGGCGGCCTATCAGTTCGCCTATCAACACACTCCGCAACGGCAGCTACAGC TGGAATTGAGCTTAGGCAATGCCCTTCGTGGCAACGCGCTGCAACTTGGCGCAGACATCACCTTTTACTTTGGTCACTAG
Upstream 100 bases:
>100_bases TTATGTGTATTTTTTGCATCTCAAAGCAAGTTTTTGCCTCAGTACCCTCCGTTTACCCGATGGATTAACACCTAAGGGTT TACACCTGAGGAGCCTTAAC
Downstream 100 bases:
>100_bases ATCGTTGAGAGAATGAACTATGAACATGAATAACAGCACAAACAACACCAAAAAAATCATCCATAACCTGCAAATGATTA TCGAGCAACGCAGTACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MAYINNAAILRSLSCASFSLYYSMSAAASHLEVDDPALAEHCELELGWQQPRSDHARPQFNATTTCSRNQWEWHLGLASN ANDAIREEQAEVGIKLPLNVNSHSDSGSDSDRQQDDWHSAVVINLQKNLDNGNGFATEAFGIIGKTLGDSDVSLYANLGF IHEFDESTQLLAGIAAAYELSSHHRVIAELYQKELSEAAYQFAYQHTPQRQLQLELSLGNALRGNALQLGADITFYFGH
Sequences:
>Translated_239_residues MAYINNAAILRSLSCASFSLYYSMSAAASHLEVDDPALAEHCELELGWQQPRSDHARPQFNATTTCSRNQWEWHLGLASN ANDAIREEQAEVGIKLPLNVNSHSDSGSDSDRQQDDWHSAVVINLQKNLDNGNGFATEAFGIIGKTLGDSDVSLYANLGF IHEFDESTQLLAGIAAAYELSSHHRVIAELYQKELSEAAYQFAYQHTPQRQLQLELSLGNALRGNALQLGADITFYFGH >Mature_238_residues AYINNAAILRSLSCASFSLYYSMSAAASHLEVDDPALAEHCELELGWQQPRSDHARPQFNATTTCSRNQWEWHLGLASNA NDAIREEQAEVGIKLPLNVNSHSDSGSDSDRQQDDWHSAVVINLQKNLDNGNGFATEAFGIIGKTLGDSDVSLYANLGFI HEFDESTQLLAGIAAAYELSSHHRVIAELYQKELSEAAYQFAYQHTPQRQLQLELSLGNALRGNALQLGADITFYFGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26386; Mature: 26255
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYINNAAILRSLSCASFSLYYSMSAAASHLEVDDPALAEHCELELGWQQPRSDHARPQF CCEECCHHHHHHHCHHHEEEEEEHHHHHCCCCCCCCHHHHHCCEEECCCCCCCCCCCCCC NATTTCSRNQWEWHLGLASNANDAIREEQAEVGIKLPLNVNSHSDSGSDSDRQQDDWHSA CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCEE VVINLQKNLDNGNGFATEAFGIIGKTLGDSDVSLYANLGFIHEFDESTQLLAGIAAAYEL EEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHH SSHHRVIAELYQKELSEAAYQFAYQHTPQRQLQLELSLGNALRGNALQLGADITFYFGH CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCEEEEEECC >Mature Secondary Structure AYINNAAILRSLSCASFSLYYSMSAAASHLEVDDPALAEHCELELGWQQPRSDHARPQF CEECCHHHHHHHCHHHEEEEEEHHHHHCCCCCCCCHHHHHCCEEECCCCCCCCCCCCCC NATTTCSRNQWEWHLGLASNANDAIREEQAEVGIKLPLNVNSHSDSGSDSDRQQDDWHSA CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCEE VVINLQKNLDNGNGFATEAFGIIGKTLGDSDVSLYANLGFIHEFDESTQLLAGIAAAYEL EEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHH SSHHRVIAELYQKELSEAAYQFAYQHTPQRQLQLELSLGNALRGNALQLGADITFYFGH CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA