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The map label for this gene is 126175491

Identifier: 126175491

GI number: 126175491

Start: 3853039

End: 3853986

Strand: Reverse

Name: 126175491

Synonym: Sbal_3291

Alternate gene names: NA

Gene position: 3853986-3853039 (Counterclockwise)

Preceding gene: 126175492

Following gene: 126175490

Centisome position: 75.16

GC content: 50.0

Gene sequence:

>948_bases
ATGAAGTTAATGAAATACTGTATCTCCCCGAGTAAGTTGGCTTGGTTACGCAAAGAATTGGGTAAAGATGCCAACGGCTT
GATTGCGGCAATGGATGCTGCGGGCACTGCTTATCTCGATAAGCTCAATGCATCGACCGAGGTGTTAGAGGGAGAGCAGT
TAGAAGGTGAGGCGGGCGAGACTGACACGCCCACCAATGCGAAGACTCAGACTCAGCGGCAAGCGCAGCGTCAGTTGGCG
TATTTGTGGTTGCAGCAGCGGATTGCCTTAGCGACTCGTATCGATGATGCTGACATGGCGGCATTAACGGCCTTTGAATT
TCAACAGATCCACATTGAGGTCGTTCAGCCATCGGAGTTTGATGCGGTTGTCGCGCGATTACAGGCTGAGCAAGTCTTAG
GTTTTGATACTGAAACCCGTGCGAGTTTTGAGCGCGGCGTACAACATCCCCTGAGCCTTATCCAAATCGCGACAGCGGAC
GCTTGTTATCTATTTCAACATGCCATTTTAGGTGAGCAATTTACCCAGTTAAAAACCGTATTAGAAGATGAAAATATACT
CAAAGTCGGCGTCGGTTTACGCAGTGATGCGCAGGCTCTCAAGCGGCAATGGGGCATCAATGTCGCTTCAAAGTTAGATT
TAAACTGGGCACTGGCGCAACTTGGGGCGGAGAAAGAAATGGGGACGCGCCAATTGGTGGCGACTCTGCTCGGCACTCGT
ATCGATAAACCGAAAAAAATCACCCTATCGAATTGGCAGCATGTGCCATTATCTGGCGCGCAAATCGATTATGCCGCCGC
CGATGCCTTGGCGGCACTCATGTGTTTCAATGCGTTAATCACTCAGCTGACGCCTTTTTATCATGCATCGAGTGCCACAA
AAGCCGCGCCGTTAATCCCTTCGAGTCTAGCGGCGCCATTGGCGAAATATTTTAAGGATGTTGAATGA

Upstream 100 bases:

>100_bases
CGCAGTCGCACTTGCTGTGATGACAGGGATACAGAAACTGCGTGGCGAGTGAGGTGCGTGCATCGACAATCGAGGATTAA
CTCAACAAGGAAGGGCGACG

Downstream 100 bases:

>100_bases
AGCGCAAAACCCAAGATGCCGCAAAGGAAGACATCAGGCCATCACACTCGGATATGAGCTCGCAGGGCACCAGTACCTTA
GGTTTGATTTACCGCGTGCT

Product: 3'-5' exonuclease

Products: NA

Alternate protein names: 3-5' Exonuclease Domain Protein; 3- 5' Exonuclease Domain Protein; 3 Exoribonuclease Family Protein; Exonuclease

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKLMKYCISPSKLAWLRKELGKDANGLIAAMDAAGTAYLDKLNASTEVLEGEQLEGEAGETDTPTNAKTQTQRQAQRQLA
YLWLQQRIALATRIDDADMAALTAFEFQQIHIEVVQPSEFDAVVARLQAEQVLGFDTETRASFERGVQHPLSLIQIATAD
ACYLFQHAILGEQFTQLKTVLEDENILKVGVGLRSDAQALKRQWGINVASKLDLNWALAQLGAEKEMGTRQLVATLLGTR
IDKPKKITLSNWQHVPLSGAQIDYAAADALAALMCFNALITQLTPFYHASSATKAAPLIPSSLAAPLAKYFKDVE

Sequences:

>Translated_315_residues
MKLMKYCISPSKLAWLRKELGKDANGLIAAMDAAGTAYLDKLNASTEVLEGEQLEGEAGETDTPTNAKTQTQRQAQRQLA
YLWLQQRIALATRIDDADMAALTAFEFQQIHIEVVQPSEFDAVVARLQAEQVLGFDTETRASFERGVQHPLSLIQIATAD
ACYLFQHAILGEQFTQLKTVLEDENILKVGVGLRSDAQALKRQWGINVASKLDLNWALAQLGAEKEMGTRQLVATLLGTR
IDKPKKITLSNWQHVPLSGAQIDYAAADALAALMCFNALITQLTPFYHASSATKAAPLIPSSLAAPLAKYFKDVE
>Mature_315_residues
MKLMKYCISPSKLAWLRKELGKDANGLIAAMDAAGTAYLDKLNASTEVLEGEQLEGEAGETDTPTNAKTQTQRQAQRQLA
YLWLQQRIALATRIDDADMAALTAFEFQQIHIEVVQPSEFDAVVARLQAEQVLGFDTETRASFERGVQHPLSLIQIATAD
ACYLFQHAILGEQFTQLKTVLEDENILKVGVGLRSDAQALKRQWGINVASKLDLNWALAQLGAEKEMGTRQLVATLLGTR
IDKPKKITLSNWQHVPLSGAQIDYAAADALAALMCFNALITQLTPFYHASSATKAAPLIPSSLAAPLAKYFKDVE

Specific function: Unknown

COG id: COG0349

COG function: function code J; Ribonuclease D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI110735439, Length=150, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21356549, Length=159, Percent_Identity=35.2201257861635, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34529; Mature: 34529

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLMKYCISPSKLAWLRKELGKDANGLIAAMDAAGTAYLDKLNASTEVLEGEQLEGEAGE
CCHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCHHHHCCCCCCCCCCC
TDTPTNAKTQTQRQAQRQLAYLWLQQRIALATRIDDADMAALTAFEFQQIHIEVVQPSEF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEECCCHH
DAVVARLQAEQVLGFDTETRASFERGVQHPLSLIQIATADACYLFQHAILGEQFTQLKTV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEDENILKVGVGLRSDAQALKRQWGINVASKLDLNWALAQLGAEKEMGTRQLVATLLGTR
HCCCCEEEECCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHC
IDKPKKITLSNWQHVPLSGAQIDYAAADALAALMCFNALITQLTPFYHASSATKAAPLIP
CCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCC
SSLAAPLAKYFKDVE
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLMKYCISPSKLAWLRKELGKDANGLIAAMDAAGTAYLDKLNASTEVLEGEQLEGEAGE
CCHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCHHHHCCCCCCCCCCC
TDTPTNAKTQTQRQAQRQLAYLWLQQRIALATRIDDADMAALTAFEFQQIHIEVVQPSEF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEECCCHH
DAVVARLQAEQVLGFDTETRASFERGVQHPLSLIQIATADACYLFQHAILGEQFTQLKTV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEDENILKVGVGLRSDAQALKRQWGINVASKLDLNWALAQLGAEKEMGTRQLVATLLGTR
HCCCCEEEECCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHC
IDKPKKITLSNWQHVPLSGAQIDYAAADALAALMCFNALITQLTPFYHASSATKAAPLIP
CCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCC
SSLAAPLAKYFKDVE
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA