| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175490
Identifier: 126175490
GI number: 126175490
Start: 3851876
End: 3852835
Strand: Reverse
Name: 126175490
Synonym: Sbal_3290
Alternate gene names: NA
Gene position: 3852835-3851876 (Counterclockwise)
Preceding gene: 126175491
Following gene: 126175488
Centisome position: 75.14
GC content: 47.5
Gene sequence:
>960_bases ATGTTAGATGCCATTTGTGAACTCGAAACAGAGGATCATTTAACAGCGAGAACCACTTACAGTGTTTTTAAGTTTCAACA ATTATCCGATGACGATATCGAGCGTTTGCGGCAATGGTTAATTTGCCCTGCGTGCGGCGGTAAAGCGTATTTTCGTAAAG CTTCAAAGGATGGCAAAGCCGCCTGTTTCGGCTCGCGTTATCACCAAGCCGATTGCATTGAATTTAAACCCTCGGCGCAA AAATCCCGCGAGGAGCAAGATGCCATCGAAGTGCATCAGCAACTAGTGGACGCCGATGCGTTAATGATTGATTTTAGCCG CAAGCCTCGCCGCCATTCTTCCGCCAACAAAGCGCCCACCGCGCCATCTGCAAGTAAGACTGCGCCAACGTCTAAGTTGT CTTCTATATCTGAGTCATCTGCTATATCTGAGTCGCCACCAGTACCTGTTGCATCGTCAGCGGACGGTCAAGTGCAAGAG TCGAAAACAGACTATCAAGTTAACACTGCGGCGCGCACAACCGAGAAACGGGTGCCAAGCCAAGGGCTCGAAAAGTTACT GCATAGTTTATTGCGCGGCACTGATCTGGCGAAATCTGATCTCTGGGTATACACAGACACTGAGCGCAAATACCGTTGGC GGGCGAAGAACTTGTTCGTCAACTTTGCCGATGCCGACCCGCTCGATAACAAACCCCACATGTATTGGGGCACAATATCC CATACAGACCCGACCATGAGCTGGCTTAATCCCGCCGACAGTAAAGATATCGGCATTCCTATCGATGGGATAAAGCAGCC ATTATTGGCGCAATTTGAAATAGAAGATAAACGCGATCTAGAAGGTGCGGGATTGATTTTATTTGGTAAATGTTTTTGGA ATAAAGAAAAGACCCGCAAAATTATTCAGCTGTGGAATAACGATTTGCAGCGGATTTTTATCTCGAAGCTGGAAGATTAG
Upstream 100 bases:
>100_bases CATGTTGATCCTGTTAGCGATGATCACCCTTGGGGTGAATGCCTGTACTTAGTGATTTTGTGAGCATCAGTGCCAGCAGG CAAGAATAAAGGAGAACGCT
Downstream 100 bases:
>100_bases CTTTGGGCAGAAACTAGAATTGGGGAGAGAAAAGGGGCTATTCCTGACGTACAAAAACGTCACGGCAAAAGTCCCTATCT ATTTTATTACTCATAACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLDAICELETEDHLTARTTYSVFKFQQLSDDDIERLRQWLICPACGGKAYFRKASKDGKAACFGSRYHQADCIEFKPSAQ KSREEQDAIEVHQQLVDADALMIDFSRKPRRHSSANKAPTAPSASKTAPTSKLSSISESSAISESPPVPVASSADGQVQE SKTDYQVNTAARTTEKRVPSQGLEKLLHSLLRGTDLAKSDLWVYTDTERKYRWRAKNLFVNFADADPLDNKPHMYWGTIS HTDPTMSWLNPADSKDIGIPIDGIKQPLLAQFEIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWNNDLQRIFISKLED
Sequences:
>Translated_319_residues MLDAICELETEDHLTARTTYSVFKFQQLSDDDIERLRQWLICPACGGKAYFRKASKDGKAACFGSRYHQADCIEFKPSAQ KSREEQDAIEVHQQLVDADALMIDFSRKPRRHSSANKAPTAPSASKTAPTSKLSSISESSAISESPPVPVASSADGQVQE SKTDYQVNTAARTTEKRVPSQGLEKLLHSLLRGTDLAKSDLWVYTDTERKYRWRAKNLFVNFADADPLDNKPHMYWGTIS HTDPTMSWLNPADSKDIGIPIDGIKQPLLAQFEIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWNNDLQRIFISKLED >Mature_319_residues MLDAICELETEDHLTARTTYSVFKFQQLSDDDIERLRQWLICPACGGKAYFRKASKDGKAACFGSRYHQADCIEFKPSAQ KSREEQDAIEVHQQLVDADALMIDFSRKPRRHSSANKAPTAPSASKTAPTSKLSSISESSAISESPPVPVASSADGQVQE SKTDYQVNTAARTTEKRVPSQGLEKLLHSLLRGTDLAKSDLWVYTDTERKYRWRAKNLFVNFADADPLDNKPHMYWGTIS HTDPTMSWLNPADSKDIGIPIDGIKQPLLAQFEIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWNNDLQRIFISKLED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36014; Mature: 36014
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDAICELETEDHLTARTTYSVFKFQQLSDDDIERLRQWLICPACGGKAYFRKASKDGKA CCCCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCHHHHHHCCCCCCE ACFGSRYHQADCIEFKPSAQKSREEQDAIEVHQQLVDADALMIDFSRKPRRHSSANKAPT EEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC APSASKTAPTSKLSSISESSAISESPPVPVASSADGQVQESKTDYQVNTAARTTEKRVPS CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCH QGLEKLLHSLLRGTDLAKSDLWVYTDTERKYRWRAKNLFVNFADADPLDNKPHMYWGTIS HHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHEEEEEEEEEECCCCCCCCCCCEEEEECC HTDPTMSWLNPADSKDIGIPIDGIKQPLLAQFEIEDKRDLEGAGLILFGKCFWNKEKTRK CCCCCHHHCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCEEEEEHHHCCHHHHHH IIQLWNNDLQRIFISKLED HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLDAICELETEDHLTARTTYSVFKFQQLSDDDIERLRQWLICPACGGKAYFRKASKDGKA CCCCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCHHHHHHCCCCCCE ACFGSRYHQADCIEFKPSAQKSREEQDAIEVHQQLVDADALMIDFSRKPRRHSSANKAPT EEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC APSASKTAPTSKLSSISESSAISESPPVPVASSADGQVQESKTDYQVNTAARTTEKRVPS CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCH QGLEKLLHSLLRGTDLAKSDLWVYTDTERKYRWRAKNLFVNFADADPLDNKPHMYWGTIS HHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHEEEEEEEEEECCCCCCCCCCCEEEEECC HTDPTMSWLNPADSKDIGIPIDGIKQPLLAQFEIEDKRDLEGAGLILFGKCFWNKEKTRK CCCCCHHHCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCEEEEEHHHCCHHHHHH IIQLWNNDLQRIFISKLED HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA