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The map label for this gene is ybeD [C]

Identifier: 126175480

GI number: 126175480

Start: 3842868

End: 3843134

Strand: Direct

Name: ybeD [C]

Synonym: Sbal_3280

Alternate gene names: 126175480

Gene position: 3842868-3843134 (Clockwise)

Preceding gene: 126175479

Following gene: 126175481

Centisome position: 74.95

GC content: 46.44

Gene sequence:

>267_bases
ATGTTAGACACTAAATTTGATGAACTGATGGATTTCCCCTGCGCATTTCCTTTTAAGGTCGTCGGTGAAGCCCATGAAAC
GTTAACTGACAAAGTTGTGGCTGTGGTACAGAAACATGCACCAGGTGATTACTCACCGTCGACCAAAACGTCGAGCAAAG
GCAGCTATCACTCCATCACGATTCGCGTGACAGTCACCAGCAAAGATCATATCGAGATTTTGTACACTGAACTTGCCGCC
ATCGAAGGTGTACGCCGCGTACTATAA

Upstream 100 bases:

>100_bases
CACCTTCGGGTGGCTTTATTTTTTTGGGGAGTGCATCGCCCTTGAATCGGGTATAATCGTCACCATATATATCCCAATAT
AGCCGCTAAGAGTACTGAGT

Downstream 100 bases:

>100_bases
ATATTCCTCAAGGCCATGAAATGTGATCTGTCTTACATTTATGGCCAATAAGCGTATAATAGCCCACTCATTTCTAAGGG
GAGAGGTTGCCCTTGCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MLDTKFDELMDFPCAFPFKVVGEAHETLTDKVVAVVQKHAPGDYSPSTKTSSKGSYHSITIRVTVTSKDHIEILYTELAA
IEGVRRVL

Sequences:

>Translated_88_residues
MLDTKFDELMDFPCAFPFKVVGEAHETLTDKVVAVVQKHAPGDYSPSTKTSSKGSYHSITIRVTVTSKDHIEILYTELAA
IEGVRRVL
>Mature_88_residues
MLDTKFDELMDFPCAFPFKVVGEAHETLTDKVVAVVQKHAPGDYSPSTKTSSKGSYHSITIRVTVTSKDHIEILYTELAA
IEGVRRVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

Organism=Escherichia coli, GI1786850, Length=87, Percent_Identity=51.7241379310345, Blast_Score=100, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 9768; Mature: 9768

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDTKFDELMDFPCAFPFKVVGEAHETLTDKVVAVVQKHAPGDYSPSTKTSSKGSYHSIT
CCCCCHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
IRVTVTSKDHIEILYTELAAIEGVRRVL
EEEEECCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDTKFDELMDFPCAFPFKVVGEAHETLTDKVVAVVQKHAPGDYSPSTKTSSKGSYHSIT
CCCCCHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
IRVTVTSKDHIEILYTELAAIEGVRRVL
EEEEECCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA