| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175454
Identifier: 126175454
GI number: 126175454
Start: 3814866
End: 3815378
Strand: Reverse
Name: 126175454
Synonym: Sbal_3254
Alternate gene names: NA
Gene position: 3815378-3814866 (Counterclockwise)
Preceding gene: 126175455
Following gene: 126175453
Centisome position: 74.41
GC content: 49.71
Gene sequence:
>513_bases ATGCGTCATCTTATTCGTACCATTGCGGCGAGTGCTTTGTTTGTGAGTTCTGCTGCATTTGCGGCGCCGCAAATGACTGT CGATTTAACCTTGTCGGAAATTACCGAAGGCCAATACCACAGACCCTATGTGGCCGTGTGGGTTGAAAATACCCAAGGGC AACCGGTAAAAACCTTAAGCCTTTGGGTTTGGGATGAAGGCCATAAATGGCTTAAAGACATCCGTCGTTGGTGGCGTAAA GCGGGTCGTGACGATATGAGTTTTGTTGATGGTATTGCATCTGCCACACGTCCTGCGGGTCATTACAAAATCGATTGGGA TTTAAAAGATGAGTTAGGCAAAGCACTCGAGCCTGCTCGTTACACTGTGTTTATTGAAGTGGTGCGTGAGCATGGGGGAC GCGATCTCGTGCGACAAAACATCGATTTAGCTGCGGGGGACTTCTCAGTGCAGTTACCCGCCACCACTGAAACCGGCGTT ATCGACATACGCTTAAGTGGCATGGCTCGCTGA
Upstream 100 bases:
>100_bases ACTAAGCGCCTCAAAAAGTCATTGTTATACATGGTACTTGTCAGCGGTAGTTGCGGACTTGTGTATGTTTATTTCGTTCC ATAAGGAGTGTAGACCGAGT
Downstream 100 bases:
>100_bases GCCTGCTACTGAATATATTGCCCGTACATTACTCGTTAAACTTAAGGAAAAGGCATGAAATTACGTCTTATTGCATTACT TAGCACACTTTGTATTAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRHLIRTIAASALFVSSAAFAAPQMTVDLTLSEITEGQYHRPYVAVWVENTQGQPVKTLSLWVWDEGHKWLKDIRRWWRK AGRDDMSFVDGIASATRPAGHYKIDWDLKDELGKALEPARYTVFIEVVREHGGRDLVRQNIDLAAGDFSVQLPATTETGV IDIRLSGMAR
Sequences:
>Translated_170_residues MRHLIRTIAASALFVSSAAFAAPQMTVDLTLSEITEGQYHRPYVAVWVENTQGQPVKTLSLWVWDEGHKWLKDIRRWWRK AGRDDMSFVDGIASATRPAGHYKIDWDLKDELGKALEPARYTVFIEVVREHGGRDLVRQNIDLAAGDFSVQLPATTETGV IDIRLSGMAR >Mature_170_residues MRHLIRTIAASALFVSSAAFAAPQMTVDLTLSEITEGQYHRPYVAVWVENTQGQPVKTLSLWVWDEGHKWLKDIRRWWRK AGRDDMSFVDGIASATRPAGHYKIDWDLKDELGKALEPARYTVFIEVVREHGGRDLVRQNIDLAAGDFSVQLPATTETGV IDIRLSGMAR
Specific function: Unknown
COG id: COG3656
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19206; Mature: 19206
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHLIRTIAASALFVSSAAFAAPQMTVDLTLSEITEGQYHRPYVAVWVENTQGQPVKTLS CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCEEEEEEECCCCCCEEEEE LWVWDEGHKWLKDIRRWWRKAGRDDMSFVDGIASATRPAGHYKIDWDLKDELGKALEPAR EEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCH YTVFIEVVREHGGRDLVRQNIDLAAGDFSVQLPATTETGVIDIRLSGMAR HHHHHHHHHHCCCHHHHHCCCCEECCCEEEEECCCCCCCEEEEEECCCCC >Mature Secondary Structure MRHLIRTIAASALFVSSAAFAAPQMTVDLTLSEITEGQYHRPYVAVWVENTQGQPVKTLS CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCEEEEEEECCCCCCEEEEE LWVWDEGHKWLKDIRRWWRKAGRDDMSFVDGIASATRPAGHYKIDWDLKDELGKALEPAR EEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCH YTVFIEVVREHGGRDLVRQNIDLAAGDFSVQLPATTETGVIDIRLSGMAR HHHHHHHHHHCCCHHHHHCCCCEECCCEEEEECCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA